Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_H22
(817 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 28 1.4
SPCC576.01c ||SPCPB1C11.04c|sulfonate dioxygenase |Schizosacchar... 28 1.4
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 28 1.8
SPAC212.01c |||S. pombe specific DUF999 family protein 2|Schizos... 27 3.2
SPBCPT2R1.04c |||S. pombe specific DUF999 protein family 10|Schi... 27 3.2
SPAC212.04c |||S. pombe specific DUF999 family protein 1|Schizos... 27 3.2
SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein fa... 27 3.2
SPBC1348.01 |||S. pombe specific DUF999 protein family 5|Schizos... 27 3.2
SPAC750.06c |||S. pombe specific DUF999 protein family 4|Schizos... 27 3.2
SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces pombe... 27 4.2
SPCC737.06c |||glutamate-cysteine ligase regulatory subunit |Sch... 26 5.6
SPAC16C9.03 |||export adaptor|Schizosaccharomyces pombe|chr 1|||... 25 9.7
SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces p... 25 9.7
SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit |Sch... 25 9.7
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 25 9.7
SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1 |... 25 9.7
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 92 TASGGQV*RQARGSLPGLQHRRER--PHKDESSENIL 196
T S GQ+ + +L GLQH E H+D S+NIL
Sbjct: 476 TLSEGQIAAICKETLEGLQHLHENGIVHRDIKSDNIL 512
>SPCC576.01c ||SPCPB1C11.04c|sulfonate dioxygenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 413
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 269 EVIELQPLFHFTFDKVNSHIRVHVVICFPNSH 174
E ++L L F+ + + H V+CFPN H
Sbjct: 55 ENVDLNNLSDEQFEDIRKALFEHQVVCFPNQH 86
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 276 TVKDALIKLNDLVDESDPDTDL-PNIVHAFQTAERIREEHPDEDW 407
T+ L+ + L+ + +PD L P I H ++T +R R E +W
Sbjct: 98 TISKVLLSICSLLTDPNPDDPLVPEIAHVYKT-DRSRYELSAREW 141
>SPAC212.01c |||S. pombe specific DUF999 family protein
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 804 QVQPPRYRYRFPREDVCN 751
QV+PP Y F EDVCN
Sbjct: 10 QVEPPGYNELFMVEDVCN 27
>SPBCPT2R1.04c |||S. pombe specific DUF999 protein family
10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 280
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 804 QVQPPRYRYRFPREDVCN 751
QV+PP Y F EDVCN
Sbjct: 10 QVEPPGYNELFMVEDVCN 27
>SPAC212.04c |||S. pombe specific DUF999 family protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 288
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 804 QVQPPRYRYRFPREDVCN 751
QV+PP Y F EDVCN
Sbjct: 10 QVEPPGYNELFMVEDVCN 27
>SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein
family 9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 804 QVQPPRYRYRFPREDVCN 751
QV+PP Y F EDVCN
Sbjct: 10 QVEPPGYNELFMVEDVCN 27
>SPBC1348.01 |||S. pombe specific DUF999 protein family
5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 804 QVQPPRYRYRFPREDVCN 751
QV+PP Y F EDVCN
Sbjct: 10 QVEPPGYNELFMVEDVCN 27
>SPAC750.06c |||S. pombe specific DUF999 protein family
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 804 QVQPPRYRYRFPREDVCN 751
QV+PP Y F EDVCN
Sbjct: 10 QVEPPGYNELFMVEDVCN 27
>SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 396 DEDWFQLIGLMHDLGKVMAFYDEPQWCVVGDTFPVGCK 509
D D F+ L +GK +++Y C+V FP+G K
Sbjct: 522 DLDCFEKFYLSKQVGKKISWYASLGHCIVKARFPLGNK 559
>SPCC737.06c |||glutamate-cysteine ligase regulatory subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 287
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 156 ENDPIKMR---VRKTYYDMHTNMTVDFVKSKMEKWLKFNHFKATVKDALIKLNDLVDESD 326
EN IK R + + +Y++H +DFV + + + K + + ++ D +DE
Sbjct: 92 ENIDIKKREETLSQVFYNLHMLFGIDFVSTLVVSFPHITFLKESGNSSSNEIYDSIDEIP 151
Query: 327 P 329
P
Sbjct: 152 P 152
>SPAC16C9.03 |||export adaptor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 498
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 261 NHFKATVKDALIKLNDLVDESDPDTDLPNI 350
N +KA VK + D+ +E + D D+P I
Sbjct: 455 NLYKAPVKAIAVADTDMDEEDEVDEDIPQI 484
>SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 579
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 174 MRVRKTYYDMHTNMTVDFVKSKMEKWLKFNHFKATVKDALIKLN-DLVDESDP 329
MRV Y + + V+ +S W K + +KDA++ + +L+ E DP
Sbjct: 462 MRVTNDYKEWNAANQVNDPESPYTFWSKALELRKELKDAVVYGSFELISEEDP 514
>SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 366 TAERIREEHPDEDWFQLIGLMHDLGKVMAFYDE 464
T R +HPDE+ +Q I L D K+M+F +E
Sbjct: 84 TVNSCRRQHPDENGWQFI-LWTD-EKIMSFMNE 114
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 142 SRKASTGLSSYLASGRSSRDGSIMETG-ESGLIFI 41
S A T S+Y+AS + S DGS + G +GL+ I
Sbjct: 213 SALAETDESTYVASVKWSHDGSFLSVGLGNGLVDI 247
>SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 527 HNRLAPLTTNRKGITHHAPLWFIVE 453
H R+A LT +R+ HAP F E
Sbjct: 495 HKRMASLTNSREMQIQHAPTTFAAE 519
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,756,142
Number of Sequences: 5004
Number of extensions: 87369
Number of successful extensions: 304
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 398435810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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