Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_H22
(817 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038609-3|AAU87825.1| 193|Caenorhabditis elegans Hypothetical ... 226 1e-59
Z77663-17|CAB54256.5| 500|Caenorhabditis elegans Hypothetical p... 31 0.99
AL021346-4|CAB54259.5| 500|Caenorhabditis elegans Hypothetical ... 31 0.99
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 30 2.3
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 30 2.3
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 30 2.3
U80845-5|ABB51196.1| 423|Caenorhabditis elegans Temporarily ass... 29 3.0
AF271359-1|AAF75788.1| 497|Caenorhabditis elegans STE20-like ki... 29 3.0
AC006630-2|ABD63233.1| 495|Caenorhabditis elegans Hypothetical ... 29 3.0
AC006630-1|ABD63234.1| 497|Caenorhabditis elegans Hypothetical ... 29 3.0
Z81530-2|CAB04306.1| 359|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical pr... 29 4.0
AC024791-36|AAF60654.3| 481|Caenorhabditis elegans Innexin prot... 29 4.0
Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z81477-8|CAC70076.1| 739|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z80215-8|CAB02275.1| 381|Caenorhabditis elegans Hypothetical pr... 28 9.2
AL117201-6|CAB55065.2| 739|Caenorhabditis elegans Hypothetical ... 28 9.2
AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical ... 28 9.2
>AF038609-3|AAU87825.1| 193|Caenorhabditis elegans Hypothetical
protein C54E4.5 protein.
Length = 193
Score = 226 bits (553), Expect = 1e-59
Identities = 95/179 (53%), Positives = 124/179 (69%)
Frame = +3
Query: 129 EAFRDYNIDENDPIKMRVRKTYYDMHTNMTVDFVKSKMEKWLKFNHFKATVKDALIKLND 308
+ +R Y++ DPI++RVR Y+ H TVDFVK +KWLKF+H K + L L
Sbjct: 14 KTYRIYDVKAEDPIQVRVRTHYFTQHQKQTVDFVKEMHQKWLKFDHAKMPILGCLDMLAT 73
Query: 309 LVDESDPDTDLPNIVHAFQTAERIREEHPDEDWFQLIGLMHDLGKVMAFYDEPQWCVVGD 488
+DESDPD D N++HA+QTAE+IRE HPD+ W L GL+HDLGK+M+ + E QW V GD
Sbjct: 74 FLDESDPDVDEANLIHAYQTAEKIRENHPDKPWMHLAGLIHDLGKIMSVWGEEQWAVTGD 133
Query: 489 TFPVGCKWGKSIVYGDDSFQRNPDTYNPKYNTEHGMYKPKCGLXNLMMSWGHDEYLYRV 665
T+PVGC SIVYG SF NPD +P Y T+ GMY+ KCG+ NL+M+W HDEY+Y+V
Sbjct: 134 TYPVGCAPAASIVYGKSSFDGNPDISHPVYGTQMGMYQEKCGMENLLMTWSHDEYMYKV 192
>Z77663-17|CAB54256.5| 500|Caenorhabditis elegans Hypothetical
protein F53F4.14 protein.
Length = 500
Score = 31.1 bits (67), Expect = 0.99
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Frame = +3
Query: 18 RRNTDALTMKIKPDSPVSMIDPSLLLRPEAKYDDKPV---EAFRDYNIDENDPIKMRVR- 185
R NT I+P S VSM S+ ++ DD+ E ++D PI++ R
Sbjct: 48 RTNTHRQRPMIRPSSVVSMSGRSIAPSDSSENDDRHFDVDEEMESMSLDSPLPIEVPARP 107
Query: 186 ---KTYYDMHTNMTVDFVKS 236
K YY M+ T++F+++
Sbjct: 108 FPDKPYYWMNDYKTLEFIRT 127
>AL021346-4|CAB54259.5| 500|Caenorhabditis elegans Hypothetical
protein F53F4.14 protein.
Length = 500
Score = 31.1 bits (67), Expect = 0.99
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Frame = +3
Query: 18 RRNTDALTMKIKPDSPVSMIDPSLLLRPEAKYDDKPV---EAFRDYNIDENDPIKMRVR- 185
R NT I+P S VSM S+ ++ DD+ E ++D PI++ R
Sbjct: 48 RTNTHRQRPMIRPSSVVSMSGRSIAPSDSSENDDRHFDVDEEMESMSLDSPLPIEVPARP 107
Query: 186 ---KTYYDMHTNMTVDFVKS 236
K YY M+ T++F+++
Sbjct: 108 FPDKPYYWMNDYKTLEFIRT 127
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/68 (32%), Positives = 29/68 (42%)
Frame = +1
Query: 529 TETTASNVTRTRTILNTILNTACTNRSVVXRT**CPGATTSTCTEFLYITSPSFPRKRCT 708
T TT + T T T T T T + T P TT+T T T+P+ T
Sbjct: 119 TPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTP--TTTTTTPTTTTTTPTTTTTTPT 176
Query: 709 WSGTTPST 732
+ TTP+T
Sbjct: 177 TTTTTPTT 184
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = +1
Query: 529 TETTASNVTRTRTILNTILNTACTNRSVVXRT**CPGATTSTCTEFLYITSPSFPRKRCT 708
T TT + T T T T T + T TT+T T T+P+ T
Sbjct: 124 TPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPT 183
Query: 709 WSGTTPST 732
+ TTP+T
Sbjct: 184 TTTTTPTT 191
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/68 (32%), Positives = 28/68 (41%)
Frame = +1
Query: 529 TETTASNVTRTRTILNTILNTACTNRSVVXRT**CPGATTSTCTEFLYITSPSFPRKRCT 708
TETT + T T T T T T + T TT T T T+P+ T
Sbjct: 114 TETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTT----TTPTTTTTTPT 169
Query: 709 WSGTTPST 732
+ TTP+T
Sbjct: 170 TTTTTPTT 177
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = -2
Query: 225 SQQSYSCACRNMFSELSSLWGR--SRRC------CSPGRLPRACRHTWPPDAVAGMGRSW 70
++ SYSC CR F+++S+ + + RRC C+ L ++ + DA G +
Sbjct: 349 TEHSYSCRCRPGFADVSAAFNKLPGRRCIEAVNECASPSLNDCSKNAFCEDAKEGYICTC 408
Query: 69 RPG 61
RPG
Sbjct: 409 RPG 411
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = -2
Query: 225 SQQSYSCACRNMFSELSSLWGR--SRRC------CSPGRLPRACRHTWPPDAVAGMGRSW 70
++ SYSC CR F+++S+ + + RRC C+ L ++ + DA G +
Sbjct: 933 TEHSYSCRCRPGFADVSAAFNKLPGRRCIEAVNECASPSLNDCSKNAFCEDAKEGYICTC 992
Query: 69 RPG 61
RPG
Sbjct: 993 RPG 995
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = -2
Query: 225 SQQSYSCACRNMFSELSSLWGR--SRRC------CSPGRLPRACRHTWPPDAVAGMGRSW 70
++ SYSC CR F+++S+ + + RRC C+ L ++ + DA G +
Sbjct: 349 TEHSYSCRCRPGFADVSAAFNKLPGRRCIEAVNECASPSLNDCSKNAFCEDAKEGYICTC 408
Query: 69 RPG 61
RPG
Sbjct: 409 RPG 411
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = -2
Query: 225 SQQSYSCACRNMFSELSSLWGR--SRRC------CSPGRLPRACRHTWPPDAVAGMGRSW 70
++ SYSC CR F+++S+ + + RRC C+ L ++ + DA G +
Sbjct: 933 TEHSYSCRCRPGFADVSAAFNKLPGRRCIEAVNECASPSLNDCSKNAFCEDAKEGYICTC 992
Query: 69 RPG 61
RPG
Sbjct: 993 RPG 995
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = -2
Query: 225 SQQSYSCACRNMFSELSSLWGR--SRRC------CSPGRLPRACRHTWPPDAVAGMGRSW 70
++ SYSC CR F+++S+ + + RRC C+ L ++ + DA G +
Sbjct: 933 TEHSYSCRCRPGFADVSAAFNKLPGRRCIEAVNECASPSLNDCSKNAFCEDAKEGYICTC 992
Query: 69 RPG 61
RPG
Sbjct: 993 RPG 995
>U80845-5|ABB51196.1| 423|Caenorhabditis elegans Temporarily
assigned gene nameprotein 306 protein.
Length = 423
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -3
Query: 479 HAPLWFIVE---CHNLSEIMHQSNK-LEPIFIGVFLPDPLSGLEGVHDVWEI 336
H+ LW ++E ++S+IM K L I L D L GL+ +HD+ +I
Sbjct: 100 HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKI 151
>AF271359-1|AAF75788.1| 497|Caenorhabditis elegans STE20-like
kinase MST protein.
Length = 497
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -3
Query: 479 HAPLWFIVE---CHNLSEIMHQSNK-LEPIFIGVFLPDPLSGLEGVHDVWEI 336
H+ LW ++E ++S+IM K L I L D L GL+ +HD+ +I
Sbjct: 100 HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKI 151
>AC006630-2|ABD63233.1| 495|Caenorhabditis elegans Hypothetical
protein F14H12.4a protein.
Length = 495
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -3
Query: 479 HAPLWFIVE---CHNLSEIMHQSNK-LEPIFIGVFLPDPLSGLEGVHDVWEI 336
H+ LW ++E ++S+IM K L I L D L GL+ +HD+ +I
Sbjct: 100 HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKI 151
>AC006630-1|ABD63234.1| 497|Caenorhabditis elegans Hypothetical
protein F14H12.4b protein.
Length = 497
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -3
Query: 479 HAPLWFIVE---CHNLSEIMHQSNK-LEPIFIGVFLPDPLSGLEGVHDVWEI 336
H+ LW ++E ++S+IM K L I L D L GL+ +HD+ +I
Sbjct: 100 HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKI 151
>Z81530-2|CAB04306.1| 359|Caenorhabditis elegans Hypothetical
protein F36D1.2 protein.
Length = 359
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 455 ECHNLSEIMHQSNKLEPIFIGVFL 384
ECH+L + NK +PIFI +
Sbjct: 89 ECHHLGRCSFEKNKFDPIFISAIM 112
>Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical
protein C50F4.3 protein.
Length = 374
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +3
Query: 129 EAFRDYNIDENDPIKMRVRKTYYDMHTNMTVDFVKSKMEKWLKFNHFKATVKDALIKLND 308
++F + NID N+P K+ K + D ++ K ++EK +F F AT + + K+N
Sbjct: 28 DSFFEINIDRNNPEKL--YKEFEDFIVKYKRNY-KDEIEKKFRFQQFVAT-HNRVGKMNK 83
Query: 309 LVDESDPDT 335
++ DT
Sbjct: 84 AAKKAGHDT 92
>AC024791-36|AAF60654.3| 481|Caenorhabditis elegans Innexin protein
21 protein.
Length = 481
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -3
Query: 299 LDESILNSGFEVIEL--QPLFHFTFDKVNSHIRVHVVI 192
L E + N GF V+E+ L H+ D+ HI +H+++
Sbjct: 354 LVEHLGNDGFLVVEMVYDMLHHYECDRFTEHIWMHIIV 391
>Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical
protein T05F1.5 protein.
Length = 366
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 123 PVEAFRDYNIDENDPIKMRVRKTYYDMHT 209
P ++F +NID+ D I + T+Y++H+
Sbjct: 286 PAQSFFFHNIDQKDVIALCALATHYNLHS 314
>Z81477-8|CAC70076.1| 739|Caenorhabditis elegans Hypothetical
protein Y53H1C.3 protein.
Length = 739
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -3
Query: 797 SLQDIVIAFHEKMFVIATSMPRVEG 723
S++ IV+ +E++FV A S+P +EG
Sbjct: 599 SIESIVLEDYEQLFVQARSIPSIEG 623
>Z80215-8|CAB02275.1| 381|Caenorhabditis elegans Hypothetical
protein C36B1.10 protein.
Length = 381
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -3
Query: 770 HEKMFVIATSMPRVEGVVPDHVQRFLGKLGLVMYKNSVQVL 648
H+ VI + PR +G P V + LGKLG + +KN V++L
Sbjct: 51 HQMEIVIKKTWPRHKGC-PLEV-KILGKLGKLKHKNIVRLL 89
>AL117201-6|CAB55065.2| 739|Caenorhabditis elegans Hypothetical
protein Y53H1C.3 protein.
Length = 739
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -3
Query: 797 SLQDIVIAFHEKMFVIATSMPRVEG 723
S++ IV+ +E++FV A S+P +EG
Sbjct: 599 SIESIVLEDYEQLFVQARSIPSIEG 623
>AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical
protein E01A2.2a protein.
Length = 712
Score = 27.9 bits (59), Expect = 9.2
Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Frame = +3
Query: 96 RPEAKYDDKPVEAFRDYNIDEN-DPIKMRVRKTYYDMHTNMTVDFVKSKMEKWLKFNHFK 272
RP + DD V+ R + D++ DP+ + ++ +K+L
Sbjct: 38 RPGGRRDDYQVKRSRGDDADDSFDPVSRSGNGSDLPTESDSIYSGPLQTFKKFLTSQEDD 97
Query: 273 ATVKDALIKLNDLVDESDPDTDLPNIVHAFQTAERIREEHPDEDWFQL 416
+ +DA+ K N+ E H ER H DE+WF+L
Sbjct: 98 ISEEDAIKKYNEYKTE-----------HRKHQLERFFRAHKDEEWFRL 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,967,628
Number of Sequences: 27780
Number of extensions: 500149
Number of successful extensions: 1482
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1482
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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