Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_H19
(785 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 27 0.13
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 27 0.22
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 22 4.8
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 22 4.8
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 22 4.8
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 22 6.4
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 22 6.4
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 22 6.4
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 22 6.4
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 22 6.4
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 8.4
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 8.4
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 27.5 bits (58), Expect = 0.13
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -1
Query: 662 KIITIEMTATNLTKLS---GGSHSATKGSTAYLAKLRQIMAICDGFKTNVDTHEKRNAGG 492
+++T+ + A NL ++ S A G + L + I AI D F + D + N GG
Sbjct: 5 RLVTLWL-AFNLASIAQDPSASVDAATGGGSVLGDVN-ISAILDSFSVSYDKRVRPNYGG 62
Query: 491 PP 486
PP
Sbjct: 63 PP 64
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 26.6 bits (56), Expect = 0.22
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 68 TMNSRQGMHATGAHAKADWFGAGAQPAAMPKTARRERST 184
T+ + G+HATG+ A + GAG P +P + R T
Sbjct: 249 TVGASFGLHATGS-APSPTAGAGGLPPQVPSPRSQRRYT 286
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 22.2 bits (45), Expect = 4.8
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 160 DGTTGAFDDGNSNPGDKL--EGSDAAPDDPVHLKRRV 264
+ + GA G+S+P DKL E S + D +H R+
Sbjct: 143 NNSNGASSVGSSSPFDKLIEEDSRSNEDTSLHPSPRI 179
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 22.2 bits (45), Expect = 4.8
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 160 DGTTGAFDDGNSNPGDKL--EGSDAAPDDPVHLKRRV 264
+ + GA G+S+P DKL E S + D +H R+
Sbjct: 91 NNSNGASSVGSSSPFDKLIEEDSRSNEDTSLHPSPRI 127
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 22.2 bits (45), Expect = 4.8
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 160 DGTTGAFDDGNSNPGDKL--EGSDAAPDDPVHLKRRV 264
+ + GA G+S+P DKL E S + D +H R+
Sbjct: 274 NNSNGASSVGSSSPFDKLIEEDSRSNEDTSLHPSPRI 310
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 21.8 bits (44), Expect = 6.4
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -2
Query: 190 CHRRTLPSCRLRHRSWLSTRAKPIRLRVCSR 98
CH+R L+ L T +P R C R
Sbjct: 15 CHKRFTRDHHLKTHMRLHTGERPYRCEHCDR 45
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 305 IIVPTIRATPLKS 267
+++PT+ TPLKS
Sbjct: 9 LVIPTMARTPLKS 21
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 531 NQCRYP*KEECGWAPEGVHE 472
+ CR+ GW+P G HE
Sbjct: 75 HHCRFKFSSSVGWSPAG-HE 93
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 725 LAAVKIFCTFVAKL 684
L+ K FCTFVA L
Sbjct: 37 LSKAKSFCTFVAAL 50
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 21.8 bits (44), Expect = 6.4
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -2
Query: 190 CHRRTLPSCRLRHRSWLSTRAKPIRLRVCSR 98
CH+R L+ L T +P R C R
Sbjct: 168 CHKRFTRDHHLKTHMRLHTGERPYRCEHCDR 198
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 181 DDGNSNPGDKLEGSD 225
++G+ GDKLEG +
Sbjct: 18 EEGSPEEGDKLEGDE 32
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 64 HHNEQPTGNACNGST 108
HH P GNA G T
Sbjct: 43 HHFNSPAGNAHTGPT 57
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,461
Number of Sequences: 336
Number of extensions: 4636
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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