Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_H19
(785 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 26 0.35
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 26 0.35
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 24 1.4
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 24 1.4
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 24 1.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 3.2
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 3.2
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 4.3
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 5.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 5.6
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 22 7.4
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 9.8
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 9.8
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 9.8
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 9.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 9.8
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 9.8
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 9.8
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 9.8
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 26.2 bits (55), Expect = 0.35
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 557 IMAICDGFKTNVDTHEKRNAGGPP 486
I AI D F + D + N GGPP
Sbjct: 12 ISAILDSFSVSYDKRVRPNYGGPP 35
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 26.2 bits (55), Expect = 0.35
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 557 IMAICDGFKTNVDTHEKRNAGGPP 486
I AI D F + D + N GGPP
Sbjct: 12 ISAILDSFSVSYDKRVRPNYGGPP 35
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 568 FAKYAVEPFVAECEPPDSLVKLVAVISIV 654
F Y + PF +C P D +V + + V
Sbjct: 344 FLMYVIVPFCPDCCPSDRMVYFITWLGYV 372
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 568 FAKYAVEPFVAECEPPDSLVKLVAVISIV 654
F Y + PF +C P D +V + + V
Sbjct: 344 FLMYVIVPFCPDCCPSDRMVYFITWLGYV 372
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 568 FAKYAVEPFVAECEPPDSLVKLVAVISIV 654
F Y + PF +C P D +V + + V
Sbjct: 344 FLMYVIVPFCPDCCPSDRMVYFITWLGYV 372
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 3.2
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +1
Query: 64 HHNEQPTGNACNGSTREGGLVWRGCSASCDAEDGTTGAFDDGNS---NPGDKL 213
H N QPT N C+ R + S AE G+ A + + +PG+ L
Sbjct: 871 HENNQPTMNKCSDRKRPASQ-----ATSVKAEPGSIMAMSESSKKVLSPGELL 918
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -3
Query: 63 HCSKHRAVCEESRPLMTQKRL 1
HC HRA C L T+ RL
Sbjct: 128 HCELHRAACHSGSSL-TKSRL 147
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/39 (28%), Positives = 16/39 (41%)
Frame = +3
Query: 342 GAYRLSGHKLHHLDGMWPALVAWSACVCGIRDNEYIIWR 458
G Y L H +HH + A++ S +C Y R
Sbjct: 272 GVYHLDNHHVHHAN--HHAILGHSGFLCERHQKRYFFGR 308
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.2 bits (45), Expect = 5.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 279 PTEESHPSLEVNRVVRSCVRP 217
PT + H + VNR + S V+P
Sbjct: 253 PTVQQHQPVTVNRQLNSDVQP 273
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 5.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 498 RIPLFMGIDIGFKTITNGHYLPKLR 572
+IPL M I K+I N Y PK R
Sbjct: 534 KIPLRMTAGIDPKSIFNSGYRPKPR 558
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.8 bits (44), Expect = 7.4
Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 438 NEYIIWR*IRLFHGRLRGPTR-IPLFMG 518
+EY +WR R+ +G + P + +F G
Sbjct: 143 DEYYVWRDARIVNGTRQPPNNWLSVFWG 170
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.4 bits (43), Expect = 9.8
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = +3
Query: 102 EHTRR--RIGLARVLSQLRCRRRHD 170
EH R +IG++R +S LR +H+
Sbjct: 429 EHRIRHSQIGISRAMSALRILEKHE 453
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 695 RMCKIFSQRPNSLRSRS 745
+ CK ++ NSLRSRS
Sbjct: 205 KTCKKYAISSNSLRSRS 221
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 695 RMCKIFSQRPNSLRSRS 745
+ CK ++ NSLRSRS
Sbjct: 205 KTCKKYAISSNSLRSRS 221
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 695 RMCKIFSQRPNSLRSRS 745
+ CK ++ NSLRSRS
Sbjct: 205 KTCKKYAISSNSLRSRS 221
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 695 RMCKIFSQRPNSLRSRS 745
+ CK ++ NSLRSRS
Sbjct: 205 KTCKKYAISSNSLRSRS 221
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 695 RMCKIFSQRPNSLRSRS 745
+ CK ++ NSLRSRS
Sbjct: 205 KTCKKYAISSNSLRSRS 221
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 695 RMCKIFSQRPNSLRSRS 745
+ CK ++ NSLRSRS
Sbjct: 205 KTCKKYAISSNSLRSRS 221
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 695 RMCKIFSQRPNSLRSRS 745
+ CK ++ NSLRSRS
Sbjct: 205 KTCKKYAISSNSLRSRS 221
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,417
Number of Sequences: 438
Number of extensions: 5606
Number of successful extensions: 25
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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