Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_H17
(834 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 352 7e-96
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 299 7e-80
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 252 8e-66
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 195 1e-48
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 182 1e-44
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 166 7e-40
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 164 3e-39
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 123 3e-38
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 161 3e-38
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 158 1e-37
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 154 3e-36
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 152 9e-36
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 150 4e-35
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 149 6e-35
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 149 1e-34
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 147 3e-34
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 147 3e-34
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 146 8e-34
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 144 3e-33
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 142 7e-33
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 142 7e-33
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 141 2e-32
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 141 2e-32
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 141 2e-32
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 141 2e-32
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 140 3e-32
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 140 3e-32
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 139 9e-32
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 139 9e-32
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 138 1e-31
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 138 1e-31
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 138 2e-31
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 138 2e-31
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 137 4e-31
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 137 4e-31
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 137 4e-31
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 136 5e-31
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 136 6e-31
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 136 8e-31
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 135 1e-30
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 135 1e-30
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 135 1e-30
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 135 1e-30
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 135 1e-30
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 134 2e-30
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 134 2e-30
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 134 2e-30
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 134 3e-30
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 134 3e-30
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 134 3e-30
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 134 3e-30
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 134 3e-30
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 134 3e-30
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 134 3e-30
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 133 5e-30
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 133 5e-30
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 133 5e-30
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 133 5e-30
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 133 5e-30
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 133 6e-30
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 133 6e-30
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 132 8e-30
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 132 8e-30
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 132 1e-29
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 132 1e-29
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 132 1e-29
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 132 1e-29
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 132 1e-29
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 131 2e-29
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 131 2e-29
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 131 2e-29
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 131 2e-29
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 131 2e-29
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 131 2e-29
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 131 2e-29
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 131 2e-29
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 130 6e-29
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 130 6e-29
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 129 7e-29
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 129 7e-29
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 129 7e-29
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 129 1e-28
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 129 1e-28
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 128 1e-28
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 128 1e-28
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 128 2e-28
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 128 2e-28
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 128 2e-28
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 128 2e-28
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 128 2e-28
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 128 2e-28
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 127 3e-28
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 127 3e-28
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 127 4e-28
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 127 4e-28
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 127 4e-28
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 126 5e-28
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 126 7e-28
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 126 7e-28
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 126 7e-28
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 126 9e-28
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 126 9e-28
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 126 9e-28
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 126 9e-28
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 126 9e-28
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 126 9e-28
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 126 9e-28
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 126 9e-28
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 125 1e-27
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 125 1e-27
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 125 2e-27
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 125 2e-27
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 125 2e-27
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 125 2e-27
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 125 2e-27
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 124 2e-27
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 124 2e-27
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 124 2e-27
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 124 2e-27
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 124 2e-27
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 124 2e-27
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 124 3e-27
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 124 3e-27
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 124 3e-27
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 124 4e-27
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 123 5e-27
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 123 6e-27
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 123 6e-27
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 123 6e-27
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 123 6e-27
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 122 8e-27
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 122 8e-27
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 122 8e-27
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 122 1e-26
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 122 1e-26
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 122 1e-26
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 122 1e-26
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 121 2e-26
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 121 2e-26
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 121 2e-26
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 121 2e-26
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 121 2e-26
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 121 3e-26
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 121 3e-26
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 121 3e-26
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 120 3e-26
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 120 3e-26
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 120 3e-26
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 120 3e-26
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 120 3e-26
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 120 4e-26
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 120 4e-26
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 120 6e-26
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 120 6e-26
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 120 6e-26
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 120 6e-26
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 120 6e-26
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 120 6e-26
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 120 6e-26
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 119 8e-26
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 119 8e-26
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 119 1e-25
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 119 1e-25
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 119 1e-25
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 118 1e-25
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 118 1e-25
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 118 1e-25
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 118 1e-25
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 118 1e-25
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 118 2e-25
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 118 2e-25
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 118 2e-25
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 118 2e-25
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 118 2e-25
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 118 2e-25
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 118 2e-25
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 118 2e-25
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 118 2e-25
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 118 2e-25
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 117 3e-25
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 117 3e-25
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 117 3e-25
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 117 4e-25
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 117 4e-25
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 117 4e-25
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 117 4e-25
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 117 4e-25
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 117 4e-25
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 116 6e-25
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 116 6e-25
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 116 6e-25
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 116 7e-25
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 116 7e-25
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 116 7e-25
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 116 1e-24
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 116 1e-24
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 115 1e-24
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 115 1e-24
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 115 1e-24
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 115 2e-24
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 115 2e-24
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 115 2e-24
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 115 2e-24
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 115 2e-24
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 115 2e-24
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 115 2e-24
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 115 2e-24
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 114 2e-24
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 114 2e-24
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 114 3e-24
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 114 3e-24
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 114 3e-24
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 114 3e-24
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 113 4e-24
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 113 4e-24
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 113 4e-24
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 113 4e-24
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 113 4e-24
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 113 4e-24
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 113 4e-24
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 113 4e-24
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 113 4e-24
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 113 4e-24
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 113 4e-24
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 113 5e-24
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 113 5e-24
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 113 5e-24
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 113 5e-24
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 113 5e-24
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 113 5e-24
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 113 7e-24
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 113 7e-24
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 113 7e-24
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 113 7e-24
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 113 7e-24
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 112 9e-24
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 112 9e-24
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 112 9e-24
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 112 9e-24
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 112 9e-24
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 112 9e-24
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 112 9e-24
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 112 1e-23
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 112 1e-23
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 112 1e-23
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 112 1e-23
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 112 1e-23
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 112 1e-23
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 111 2e-23
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 111 2e-23
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 111 2e-23
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 111 2e-23
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 111 2e-23
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 111 2e-23
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 111 2e-23
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 111 2e-23
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 111 2e-23
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 111 2e-23
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 111 3e-23
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 111 3e-23
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 111 3e-23
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 110 4e-23
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 110 4e-23
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 110 4e-23
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 110 4e-23
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 110 4e-23
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 110 5e-23
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 110 5e-23
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 110 5e-23
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 110 5e-23
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 110 5e-23
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 110 5e-23
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 110 5e-23
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 110 5e-23
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 109 6e-23
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 109 6e-23
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 109 6e-23
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 109 6e-23
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 109 6e-23
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 109 6e-23
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 109 6e-23
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 109 8e-23
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 109 8e-23
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 109 8e-23
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 109 8e-23
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 109 8e-23
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 109 1e-22
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 109 1e-22
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 109 1e-22
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 109 1e-22
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 108 1e-22
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 108 1e-22
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 108 1e-22
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 108 1e-22
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 108 1e-22
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 108 1e-22
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 108 1e-22
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 108 2e-22
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 108 2e-22
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 108 2e-22
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 108 2e-22
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 108 2e-22
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 107 3e-22
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 107 3e-22
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 107 3e-22
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 107 3e-22
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 107 3e-22
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 107 3e-22
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 107 3e-22
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 107 3e-22
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 107 3e-22
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 107 3e-22
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 107 3e-22
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 107 3e-22
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 107 3e-22
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 107 4e-22
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 107 4e-22
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 107 4e-22
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 107 4e-22
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 107 4e-22
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 107 4e-22
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 107 4e-22
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 106 6e-22
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 106 6e-22
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 106 6e-22
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 106 6e-22
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 106 6e-22
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 106 8e-22
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 106 8e-22
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 106 8e-22
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 106 8e-22
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 106 8e-22
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 106 8e-22
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 106 8e-22
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 105 1e-21
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 105 1e-21
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 105 1e-21
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 105 1e-21
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 105 1e-21
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 105 1e-21
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 105 1e-21
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 105 1e-21
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 105 1e-21
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 105 1e-21
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 105 1e-21
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 105 1e-21
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 105 1e-21
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 105 1e-21
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 105 1e-21
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 105 2e-21
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 105 2e-21
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 105 2e-21
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 105 2e-21
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 105 2e-21
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 105 2e-21
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 104 2e-21
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 104 2e-21
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 104 2e-21
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 104 2e-21
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 104 3e-21
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 104 3e-21
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 104 3e-21
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 104 3e-21
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 104 3e-21
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 104 3e-21
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 104 3e-21
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 104 3e-21
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 104 3e-21
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 104 3e-21
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 103 4e-21
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 103 4e-21
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 103 4e-21
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 103 4e-21
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 103 4e-21
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 103 4e-21
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 103 4e-21
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 103 4e-21
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 103 4e-21
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 103 6e-21
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 103 6e-21
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 103 6e-21
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 103 6e-21
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 103 6e-21
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 103 6e-21
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 103 6e-21
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 103 7e-21
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 103 7e-21
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 103 7e-21
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 103 7e-21
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 103 7e-21
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 102 1e-20
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 102 1e-20
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 102 1e-20
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 102 1e-20
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 102 1e-20
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 102 1e-20
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 102 1e-20
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 102 1e-20
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 102 1e-20
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 102 1e-20
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 102 1e-20
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 102 1e-20
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 102 1e-20
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 102 1e-20
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 102 1e-20
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 102 1e-20
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 102 1e-20
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 101 2e-20
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 101 2e-20
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 101 2e-20
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 101 2e-20
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 101 2e-20
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 101 2e-20
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 101 2e-20
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 101 2e-20
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 101 2e-20
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 101 2e-20
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 101 2e-20
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 101 2e-20
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 101 3e-20
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 101 3e-20
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 101 3e-20
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 101 3e-20
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 101 3e-20
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 100 4e-20
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 100 4e-20
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 100 4e-20
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 100 4e-20
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 100 4e-20
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 100 4e-20
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 100 4e-20
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 100 4e-20
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 100 4e-20
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 100 4e-20
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 100 5e-20
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 100 5e-20
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 100 5e-20
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 100 5e-20
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 100 5e-20
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 100 5e-20
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 100 5e-20
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 100 5e-20
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 99 7e-20
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 99 7e-20
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 99 7e-20
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 99 7e-20
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 100 9e-20
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 100 9e-20
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 100 9e-20
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 100 9e-20
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 100 9e-20
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 100 9e-20
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 99 1e-19
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 99 1e-19
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 99 1e-19
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 99 1e-19
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 99 1e-19
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 99 1e-19
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 99 1e-19
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 99 2e-19
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 99 2e-19
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 98 2e-19
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 98 2e-19
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 98 2e-19
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 98 2e-19
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 98 2e-19
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 98 2e-19
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 98 2e-19
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 98 2e-19
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 98 2e-19
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 98 3e-19
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 98 3e-19
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 98 3e-19
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 98 3e-19
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 97 4e-19
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 97 4e-19
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 97 4e-19
UniRef50_A5K5I2 Cluster: Putative uncharacterized protein; n=1; ... 97 4e-19
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 97 4e-19
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 97 4e-19
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 97 4e-19
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 97 5e-19
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 97 5e-19
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 97 5e-19
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 97 5e-19
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 97 5e-19
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 97 5e-19
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 97 5e-19
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 97 5e-19
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 97 5e-19
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 97 6e-19
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 97 6e-19
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 97 6e-19
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 97 6e-19
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 97 6e-19
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 97 6e-19
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 97 6e-19
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 96 8e-19
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 96 8e-19
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 96 8e-19
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 352 bits (865), Expect = 7e-96
Identities = 170/220 (77%), Positives = 193/220 (87%)
Frame = +2
Query: 143 MTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 322
M +S + R + ED++ VEF+TSE+V+V PTFD+MGLR++LLRGIY YGFEKPSAIQQ
Sbjct: 7 MATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQ 66
Query: 323 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVI 502
R+I I+KGRDVIAQ+QSGTGKTATFSIS+LQ LD +RETQ LIL+PTRELA QIQK +
Sbjct: 67 RAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGL 126
Query: 503 LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 682
LALGD+MNVQCHACIGGTN+GEDIRKLDYGQHVV+GTPGRVFDMIRRR LRTR+IKMLVL
Sbjct: 127 LALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVL 186
Query: 683 DEADEMLNKGFKEQIYDVYRYLPPATQGCAYISNTTP*DI 802
DEADEMLNKGFKEQIYDVYRYLPPATQ IS T P +I
Sbjct: 187 DEADEMLNKGFKEQIYDVYRYLPPATQ-VVLISATLPHEI 225
Score = 39.9 bits (89), Expect = 0.077
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +3
Query: 762 RVVLISATLPHEILEMTSKF 821
+VVLISATLPHEILEMT+KF
Sbjct: 213 QVVLISATLPHEILEMTNKF 232
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 299 bits (733), Expect = 7e-80
Identities = 154/220 (70%), Positives = 176/220 (80%)
Frame = +2
Query: 143 MTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 322
M +S + R + ED++ VEF+TSE+V+V PTFD+MGLR++LLRGIY YGFEKPSAIQQ
Sbjct: 7 MATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQ 66
Query: 323 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVI 502
R+I I+KGRDVIAQ+QSGTGKTATFS+S+LQ LD IQ +
Sbjct: 67 RAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLD--------------------IQG-L 105
Query: 503 LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 682
LALGD+MNVQCHACIGGTN+GEDIRKLDYGQHVV+GTPGRVFDMIRRR LRTR+IKMLVL
Sbjct: 106 LALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVL 165
Query: 683 DEADEMLNKGFKEQIYDVYRYLPPATQGCAYISNTTP*DI 802
DEADEMLNKGFKEQIYDVYRYLPPATQ IS T P +I
Sbjct: 166 DEADEMLNKGFKEQIYDVYRYLPPATQ-VVLISATLPHEI 204
Score = 39.9 bits (89), Expect = 0.077
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +3
Query: 762 RVVLISATLPHEILEMTSKF 821
+VVLISATLPHEILEMT+KF
Sbjct: 192 QVVLISATLPHEILEMTNKF 211
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 252 bits (617), Expect = 8e-66
Identities = 121/193 (62%), Positives = 151/193 (78%), Gaps = 1/193 (0%)
Frame = +2
Query: 227 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 406
E++ FD M L++ LLRGIY YGFEKPSAIQQR+I+P +KG DVIAQAQSGTGKTATF+I
Sbjct: 30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 89
Query: 407 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
SILQ L+ +ETQ L+L+PTRELA QIQKVILALGD+M CHACIGGTN+ +++KL
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQ 149
Query: 587 -YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
H+V GTPGRVFDM+ RR L + IKM VLDEADEML++GFK+QIY++++ L + Q
Sbjct: 150 AEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQ 209
Query: 764 GCAYISNTTP*DI 802
+S T P D+
Sbjct: 210 -VVLLSATMPTDV 221
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 195 bits (476), Expect = 1e-48
Identities = 94/218 (43%), Positives = 144/218 (66%), Gaps = 1/218 (0%)
Frame = +2
Query: 152 SEVSSNRKILSEDLSNVEFDTSED-VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRS 328
S + + ++ L + D E+ +E + TF+ + L +LLRGI++YGFE+PSAIQQ++
Sbjct: 27 SFIQNKKEHLKNIMDQQTQDLQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKA 86
Query: 329 ILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILA 508
I PI+ G+DV+AQAQSGTGKT TF+I LQ +D R+TQV+IL+P RELA QI V+
Sbjct: 87 IKPIILGKDVLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKG 146
Query: 509 LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDE 688
+G ++N++ CIGGT+ E K G H++ TPGR+ DM++ + L +++LV+DE
Sbjct: 147 IGQYLNIEAFCCIGGTSTQETREKCKQGVHIIIATPGRLIDMMKNKYLDATFMRLLVVDE 206
Query: 689 ADEMLNKGFKEQIYDVYRYLPPATQGCAYISNTTP*DI 802
AD+ML++GF + ++ + +P Q A S T P +I
Sbjct: 207 ADQMLDQGFSDNFAEILKMVPGDIQ-IALFSATFPQEI 243
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 182 bits (442), Expect = 1e-44
Identities = 84/189 (44%), Positives = 128/189 (67%)
Frame = +2
Query: 197 NVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQS 376
NVE+ T+E+ + TF+SM LR ELLRGI +GF +P +QQR+++P+++GRDV+ Q
Sbjct: 9 NVEWKTNEEPIIQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFR 68
Query: 377 GTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 556
TGKT S+S+L D ++++ QVLIL TR+L + +I+ALG F+NV HAC G
Sbjct: 69 STGKTTVMSLSVLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGKFLNVSIHACSEGN 128
Query: 557 NLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDV 736
++ +DI + G +V GTP RVF++++R+ + +KM++LDEADEML K +Y +
Sbjct: 129 SIQDDISVVQQGVQIVLGTPDRVFELVQRKEISFAHLKMIILDEADEMLIDESKSLVYCI 188
Query: 737 YRYLPPATQ 763
++YLPP Q
Sbjct: 189 FKYLPPKPQ 197
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 166 bits (403), Expect = 7e-40
Identities = 84/193 (43%), Positives = 127/193 (65%)
Frame = +2
Query: 179 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 358
+SE + +F ++ +EV PT++SM L+ EL+ I G+EKPS IQQR+I I +G+++
Sbjct: 1 MSEVHEDRQFQSNVPLEVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNI 60
Query: 359 IAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 538
+ Q+Q+G+GKTATFSI L L T + T+++I+SPTRELA Q + + +LG
Sbjct: 61 MFQSQNGSGKTATFSIGTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG----ANTR 116
Query: 539 ACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFK 718
AC+GG +LG D++ L G H VSGTPGR+ +++ ++ ++ +VLDEADEML FK
Sbjct: 117 ACVGGNSLGADVKALQKGIHCVSGTPGRILQLLKEHNIQAEKVQSVVLDEADEMLT-SFK 175
Query: 719 EQIYDVYRYLPPA 757
I D+ + LP A
Sbjct: 176 STIMDILQKLPHA 188
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 164 bits (398), Expect = 3e-39
Identities = 84/165 (50%), Positives = 117/165 (70%)
Frame = +2
Query: 44 SFPLVI*KFRF*EIFTYRLTCYFKNLEAN*IRKMTSSEVSSNRKILSEDLSNVEFDTSED 223
SFPL+ K + EI YR+ K++ A M + R +D + F+T+E
Sbjct: 215 SFPLLQLKSKSKEIGRYRVR--EKSMAATATTSMVPANRGGCRNSAVDD-EKLVFETTEG 271
Query: 224 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 403
VE+I +FD MG++++LLRGIY Y FEKPSA+QQR++LPI++G DVIAQAQSGTGKT+ F+
Sbjct: 272 VELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTSMFA 331
Query: 404 ISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 538
+++ Q +DT+ RE Q LI SPTRELA+Q +KVILA+GD +N+Q H
Sbjct: 332 LTVYQMVDTSNREVQALISSPTRELASQTEKVILAIGDSVNIQAH 376
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 123 bits (297), Expect(2) = 3e-38
Identities = 57/92 (61%), Positives = 75/92 (81%)
Frame = +2
Query: 233 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 412
+ +F+ M L + LLRGI+ YGFEKPSAIQQ++I+P +KG DVIAQ+QSGTGKTAT+ I+
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAA 79
Query: 413 LQTLDTTLRETQVLILSPTRELATQIQKVILA 508
LQ +D +TQ +IL+PTRELA QIQKV+L+
Sbjct: 80 LQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
Score = 58.8 bits (136), Expect(2) = 3e-38
Identities = 27/58 (46%), Positives = 41/58 (70%)
Frame = +2
Query: 620 RVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYISNTTP 793
RVFD++ RR + ++I++LVLDEAD+ML GFK+QI++++ LP Q +S T P
Sbjct: 112 RVFDVLARRAVSAKAIRLLVLDEADQMLGNGFKDQIHEIFCKLPTNVQ-AILLSATMP 168
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 161 bits (390), Expect = 3e-38
Identities = 80/185 (43%), Positives = 114/185 (61%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF+ L+ ELL GI+ GFEKPS IQ+ +I + GRD++A+A++GTGKTA F I L+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
+ L + Q LI+ PTRELA Q +V+ LG + C GGTNL +DI +L+ H
Sbjct: 107 KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVH 166
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
++ GTPGRV D+ R+V + ++DEAD+ML++ FK I + +LPP Q +
Sbjct: 167 ILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLF- 225
Query: 779 SNTTP 793
S T P
Sbjct: 226 SATFP 230
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 158 bits (384), Expect = 1e-37
Identities = 79/176 (44%), Positives = 112/176 (63%)
Frame = +2
Query: 215 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 394
S + + T++ GL+++LL+GIY+ GFE PS IQ+ +I PI+ GRD+ AQAQSGTGKT
Sbjct: 31 SSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTG 90
Query: 395 TFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 574
F+++ LQ D + TQ+L+L+ TRE+A Q LG FM + GG+ + D
Sbjct: 91 AFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGSPIAADK 150
Query: 575 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYR 742
L+ H+V GTPGRV MI L +IK+ V+DEADEML GF+EQ+ ++R
Sbjct: 151 VALEKKPHIVVGTPGRVEHMININELSMDNIKLFVIDEADEMLKAGFQEQVKSIFR 206
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 154 bits (373), Expect = 3e-36
Identities = 75/202 (37%), Positives = 125/202 (61%), Gaps = 1/202 (0%)
Frame = +2
Query: 191 LSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 370
+++ + +T + E + F S+GL + LL + + GF + IQ +I P++ G+DV+ +A
Sbjct: 1 MTDQKTETVTEPEAV-AFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEA 59
Query: 371 QSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACI 547
Q+GTGKTA F + L +DT++++ Q+++L+PTRELA Q+ + I + G D ++
Sbjct: 60 QTGTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLY 119
Query: 548 GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQI 727
GG + G ++L+ G VV GTPGR+ D +RR+ L+ +++ VLDEADEMLN GF E I
Sbjct: 120 GGQSYGPQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDI 179
Query: 728 YDVYRYLPPATQGCAYISNTTP 793
+ ++P Q C + + P
Sbjct: 180 QWILDHIPKTAQMCLFSATMPP 201
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 152 bits (369), Expect = 9e-36
Identities = 75/188 (39%), Positives = 115/188 (61%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+FD +GL + + R I +G+E+P+ +Q + P+ G+DVI ++++GTGKTA F+I IL+
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILE 80
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
+ R L++ PTRELA Q+ + AL ++ A GG ++GE ++KL+ G
Sbjct: 81 RIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQLQKLEAGAE 140
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
++ GTPGR++D IRRR L+ + LDEADEMLN GF E++ + LP Q +
Sbjct: 141 IIVGTPGRIYDHIRRRTLKLDETMVCCLDEADEMLNMGFFEEVTRILDNLPKDCQQLLF- 199
Query: 779 SNTTP*DI 802
S T P DI
Sbjct: 200 SATVPADI 207
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 150 bits (364), Expect = 4e-35
Identities = 72/169 (42%), Positives = 111/169 (65%), Gaps = 1/169 (0%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 415
+F ++GL DE+L + GF P+ IQ+++I +++G RD++ QAQ+GTGKTA F I IL
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
Query: 416 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
+T+D + R TQ LIL+PTRELA Q+ + I ++ + GG ++ IR+L G
Sbjct: 63 ETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRRGV 122
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYR 742
+V GTPGR+ D I RR ++ ++ +VLDEADEMLN GF + + ++ +
Sbjct: 123 QIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILK 171
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 149 bits (362), Expect = 6e-35
Identities = 76/185 (41%), Positives = 112/185 (60%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF + L +++L+ + GFE+PS IQ ++I +++G+DVI QAQ+GTGKTA F + I++
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVE 66
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
L R Q L+L+PTRELA Q+ + I +G V+ A GG ++ IR L +G
Sbjct: 67 RLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLRFGVD 126
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
VV GTPGR+ D + R L ++M+VLDEADEML+ GF E I + + P Q +
Sbjct: 127 VVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLDMGFIEDIEKILQNTPAERQTLLFS 186
Query: 779 SNTTP 793
+ P
Sbjct: 187 ATMPP 191
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 149 bits (360), Expect = 1e-34
Identities = 74/185 (40%), Positives = 112/185 (60%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF +GL D LL+ + + GFE+ + IQ +I ++G+D+I QAQ+GTGKTA F + +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
+DT Q ++++PTRELA Q+ + + +G V+ GG ++ IR L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
++ GTPGR+ D I R+ LR ++++ +VLDEADEMLN GF E I + +P Q +
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLF- 181
Query: 779 SNTTP 793
S T P
Sbjct: 182 SATMP 186
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 147 bits (356), Expect = 3e-34
Identities = 78/186 (41%), Positives = 109/186 (58%), Gaps = 2/186 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
FD +GL++ LL+ I GFE+PS IQ SI ++G D+I QAQ+GTGKTA F +I+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 422 LDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
D + + + LIL+PTRELA Q+ + ++ LG + GG + IR L G
Sbjct: 66 ADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRALKNGV 125
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
+V GTPGRV D+IRR+ L I LVLDEADEMLN GF + + ++ + L Q +
Sbjct: 126 DIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDRQTLLF 185
Query: 776 ISNTTP 793
+ P
Sbjct: 186 SATMPP 191
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 147 bits (356), Expect = 3e-34
Identities = 81/191 (42%), Positives = 112/191 (58%), Gaps = 1/191 (0%)
Frame = +2
Query: 224 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 403
+E + +F + L +ELL+ I GF +PS IQ +I +++GRDVI QAQ+GTGKTA F
Sbjct: 1 MESVESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFG 60
Query: 404 ISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRK 580
+ +LQ +D R Q L+L PTRELA Q+ + AL + V+ + GG +
Sbjct: 61 LPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASA 120
Query: 581 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 760
L G VV GTPGR+ D I R L+ ++M VLDEADEML+ GF+E I + +P
Sbjct: 121 LRRGAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEWV 180
Query: 761 QGCAYISNTTP 793
Q A+ S T P
Sbjct: 181 QS-AFFSATMP 190
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 146 bits (353), Expect = 8e-34
Identities = 81/185 (43%), Positives = 111/185 (60%), Gaps = 1/185 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F S+GL LLR I G+E+PS IQ++SI +++G+DV+ AQ+GTGKTA F++ +L
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQH 598
+RE QVL+L+PTRELA Q+ + + NV+ + GG++ G R L G
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQ 127
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
V GTPGRV D IRR L+ I+ +VLDEADEML GF + + V +P Q A
Sbjct: 128 WVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPEKRQ-IALF 186
Query: 779 SNTTP 793
S T P
Sbjct: 187 SATMP 191
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 144 bits (348), Expect = 3e-33
Identities = 75/175 (42%), Positives = 107/175 (61%), Gaps = 1/175 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F+ GLR ELL GIYT GFE+PS IQ+++I + GRD++A+A++GTGKTA+F I L
Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNR 97
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 598
++T+L Q LIL PTRELA Q +V LG + N+Q GGT L +DI +L H
Sbjct: 98 INTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDDILRLQQPVH 157
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
++ GTPGR+ D+ + + + V+DEAD++L++ F I P Q
Sbjct: 158 ILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLLSEDFMPVIEQTLALCPQERQ 212
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 142 bits (345), Expect = 7e-33
Identities = 72/185 (38%), Positives = 109/185 (58%), Gaps = 1/185 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F +GL E++ I + G+ + + IQ+++I ++ G+D+ QAQ+GTGKTA F I ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQH 598
+D ++ +TQ LIL PTRELA Q+ + L F ++ A GG ++ IR L G H
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKAGAH 122
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
+V GTPGR+ D + RR L + ++LDEADEMLN GF+E I + LP Q +
Sbjct: 123 IVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFREDIELILTRLPEERQTVLFS 182
Query: 779 SNTTP 793
+ P
Sbjct: 183 ATLAP 187
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 142 bits (345), Expect = 7e-33
Identities = 77/186 (41%), Positives = 105/186 (56%), Gaps = 1/186 (0%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF +GL+ +L + G+EKPS IQ I ++ GRDV+ AQ+G+GKTA FS+ +LQ
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 595
LD L+ Q+L+L+PTRELA Q+ + + M V A GG +R L G
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP 126
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
+V GTPGR+ D ++R L + LVLDEADEML GF E + + +P Q A
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQ-TAL 185
Query: 776 ISNTTP 793
S T P
Sbjct: 186 FSATMP 191
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 141 bits (342), Expect = 2e-32
Identities = 77/197 (39%), Positives = 122/197 (61%), Gaps = 2/197 (1%)
Frame = +2
Query: 179 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 355
++ +LS E + +++ TF MGL ++L G+ GF KPS IQ +SI P+ + G D
Sbjct: 5 IAHNLSAKERTSDIEIQEDVTFSQMGLSQQVLNGLLNCGFHKPSPIQHKSI-PLGRCGFD 63
Query: 356 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQ 532
+I +A+SGTGKTA F I L+ +D + QV+IL+PTRE+A QI++VI +LG + ++
Sbjct: 64 LIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLK 123
Query: 533 CHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKG 712
+ IGG + D +KL H+ G PGRV +I + L+ +++ VLDEAD+++ +
Sbjct: 124 VESFIGGVAMDIDRKKLS-NCHIAIGAPGRVKHLIDKGYLKMDHVRLFVLDEADKLMEES 182
Query: 713 FKEQIYDVYRYLPPATQ 763
F++ I +Y LPP Q
Sbjct: 183 FQKDINYIYAKLPPNRQ 199
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 141 bits (342), Expect = 2e-32
Identities = 76/184 (41%), Positives = 116/184 (63%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
FD GL+D +L+GI GF PS +Q +SI I++G+D+IAQAQ+GTGKTA F+I IL T
Sbjct: 47 FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNT 106
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 601
L+ ++ + LI++PTRELA QI + IL LG F ++ GG ++ L+
Sbjct: 107 LNRN-KDIEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSIKRQCDLLEKKPKA 165
Query: 602 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYIS 781
+ TPGR+ D ++ + S +++VLDE+DEML+ GF + I +++++LP Q + S
Sbjct: 166 MIATPGRLLDHLQNGRIAHFSPQIVVLDESDEMLDMGFLDDIEEIFKFLPNTRQTLLF-S 224
Query: 782 NTTP 793
T P
Sbjct: 225 ATMP 228
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 141 bits (342), Expect = 2e-32
Identities = 76/173 (43%), Positives = 107/173 (61%), Gaps = 2/173 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISIL 415
TFD +GL LL+ I GFE PS IQ+ +I ++ + RD++A AQ+GTGKTA F +L
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLL 61
Query: 416 QTLDTTLRETQVLILSPTRELATQI-QKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 592
Q +D + + TQ LI++PTREL QI ++ L V+ A GG+N+ E R++ G
Sbjct: 62 QNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISRG 121
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 751
+V TPGR+ DM+RRR++ + VLDEADEMLN GF E I ++ P
Sbjct: 122 AQIVVATPGRMQDMMRRRMVDITKLSYCVLDEADEMLNMGFYEDITNILADTP 174
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 141 bits (342), Expect = 2e-32
Identities = 74/185 (40%), Positives = 108/185 (58%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF +GL E+++ I GFE+ + IQ ++I ++ +DVI QAQ+GTGKTA F I I++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
++ Q L+++PTRELA Q+ + + +G V+ GG ++ IR L H
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPH 122
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
V+ GTPGR+ D I R LR + +VLDEADEMLN GF E I + ++P Q +
Sbjct: 123 VIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLF- 181
Query: 779 SNTTP 793
S T P
Sbjct: 182 SATMP 186
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 140 bits (340), Expect = 3e-32
Identities = 80/191 (41%), Positives = 108/191 (56%), Gaps = 1/191 (0%)
Frame = +2
Query: 224 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 403
+E TF + +ELL+ I GFE+P+ IQ +I I+ G+DV QAQ+GTGKTA F
Sbjct: 1 MEETKTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFG 60
Query: 404 ISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRK 580
I I++ LD + Q L+LSPTRELA Q + L + + GG + +R
Sbjct: 61 IPIIERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRA 120
Query: 581 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 760
L VV GTPGRV D I+R L S+ M +LDEAD+ML+ GF+E I D++R P
Sbjct: 121 LKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPKDR 180
Query: 761 QGCAYISNTTP 793
Q + S T P
Sbjct: 181 QTILF-SATMP 190
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 140 bits (340), Expect = 3e-32
Identities = 88/213 (41%), Positives = 129/213 (60%), Gaps = 4/213 (1%)
Frame = +2
Query: 182 SEDLSNVEFDTSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 355
++DLS+ T + + P F+S+ L +L G+ GFE+PS +Q ++I P+ + G D
Sbjct: 43 AQDLSSPRTRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLD 101
Query: 356 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQ 532
+I QA+SGTGKT FS L +L TQ+LIL+PTRE+A QI VI A+G M ++
Sbjct: 102 LIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLE 161
Query: 533 CHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKG 712
CH IGGT L +D +L H+ G+PGR+ +I L SI++ +LDEAD++L +G
Sbjct: 162 CHVFIGGTPLSQDKTRLK-KCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 220
Query: 713 -FKEQIYDVYRYLPPATQGCAYISNTTP*DIGN 808
F+EQI +Y LP + Q A +S T P + N
Sbjct: 221 SFQEQINWIYSSLPASKQMLA-VSATYPEFLAN 252
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 139 bits (336), Expect = 9e-32
Identities = 78/190 (41%), Positives = 108/190 (56%), Gaps = 1/190 (0%)
Frame = +2
Query: 236 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 415
PTF + L +L + T G+E PS IQ ++I +++GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 9 PTFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLL 68
Query: 416 QTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDYG 592
LD RE QVL+L+PTRELA Q+ + G ++ + GG E + L G
Sbjct: 69 SRLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGLRRG 128
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCA 772
V+ GTPGRV D + R L+ + LVLDEADEML GF + + V P Q
Sbjct: 129 AQVIVGTPGRVIDHLDRGSLKLDGLNALVLDEADEMLRMGFIDDVKRVVSDTPKDAQR-V 187
Query: 773 YISNTTP*DI 802
+ S T P +I
Sbjct: 188 FFSATLPDEI 197
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 139 bits (336), Expect = 9e-32
Identities = 69/183 (37%), Positives = 109/183 (59%), Gaps = 2/183 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 415
TF +GL LL+ + PS IQQ++I I+ ++V+ AQ+GTGKTA F + +L
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVL 61
Query: 416 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG 592
Q ++ +L++TQVL+L PTREL Q+ K + ++ + A GG + E I+KL+
Sbjct: 62 QQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLETP 121
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCA 772
+H++ TPGR+ D+I R+ + ++K L+LDEADEMLN GF I + + P +
Sbjct: 122 KHILVATPGRLLDLIARKAVNLSNLKYLILDEADEMLNMGFLPDIDKIMKIAKPTARKLL 181
Query: 773 YIS 781
+ S
Sbjct: 182 FTS 184
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 138 bits (335), Expect = 1e-31
Identities = 76/185 (41%), Positives = 106/185 (57%), Gaps = 1/185 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F +GL D +++ + G+E PS IQ +I ++ GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILA-LGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
+ QVL+L+PTRELA Q+ + + GG + G+ + L G H
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVH 136
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
V+ GTPGRV D + R L +K LVLDEADEML GF E + +V R L PA++ A
Sbjct: 137 VIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRKL-PASRQVALF 195
Query: 779 SNTTP 793
S T P
Sbjct: 196 SATMP 200
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 138 bits (335), Expect = 1e-31
Identities = 80/181 (44%), Positives = 103/181 (56%), Gaps = 4/181 (2%)
Frame = +2
Query: 233 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI--VKGRDVIAQAQSGTGKTATFSI 406
+ FD M L LL+G+Y+YGF PS IQ +I I R VIAQAQSGTGKT FSI
Sbjct: 90 VDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSI 149
Query: 407 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNVQCHACIGGTNLGEDIR-K 580
+L +D + + TQ L+L+PTRELATQI V +G + IGG D + +
Sbjct: 150 GVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRIPGLDIAIFIGGAQRVVDAQAR 209
Query: 581 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 760
H+ TPGR D+I LR ++ KM VLDEAD+ML+ F EQ+ D+ Y P
Sbjct: 210 AASHPHICICTPGRALDLIVSGHLRVQNFKMAVLDEADQMLSDNFIEQVNDIMEYFPEDV 269
Query: 761 Q 763
Q
Sbjct: 270 Q 270
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 138 bits (334), Expect = 2e-31
Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 4/213 (1%)
Frame = +2
Query: 182 SEDLSNVEFDTSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 355
+ D+ T + V P F+S+ L +L G+ GFE+PS +Q ++I P+ + G D
Sbjct: 44 AHDIGGPRTRTGDVVLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLD 102
Query: 356 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQ 532
+I QA+SGTGKT FS L +L TQ+LIL+PTRE+A QI VI A+G M ++
Sbjct: 103 LIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLE 162
Query: 533 CHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKG 712
CH IGGT L +D +L H+ G+PGR+ +I L SI++ +LDEAD++L +G
Sbjct: 163 CHVFIGGTPLSQDKTRLK-KCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 221
Query: 713 -FKEQIYDVYRYLPPATQGCAYISNTTP*DIGN 808
F+EQI +Y LP + Q A +S T P + N
Sbjct: 222 SFQEQINWIYSSLPASKQMLA-VSATYPEVLAN 253
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 138 bits (333), Expect = 2e-31
Identities = 71/172 (41%), Positives = 101/172 (58%), Gaps = 2/172 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSI-LPIVKGRDVIAQAQSGTGKTATFSISILQ 418
F+ +GL + LLR I GFE P+ +Q+++I + + K D++A AQ+GTGKTA F ++Q
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQ 595
+D R TQ LILSPTREL QI + + + A GG ++ E R + G
Sbjct: 64 KIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKRGA 123
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 751
++ TPGR+ DMI RR++ I +LDEADEMLN GF E I ++ P
Sbjct: 124 QIIVATPGRMQDMINRRLVDISQINYCILDEADEMLNMGFYEDIVNILSTTP 175
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 137 bits (331), Expect = 4e-31
Identities = 65/90 (72%), Positives = 76/90 (84%)
Frame = +2
Query: 230 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 409
V+ FD M L++ LLRG+Y YGFEKPSAIQQR+ILP +KG DVIAQAQSGTGKTATF IS
Sbjct: 28 VVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHDVIAQAQSGTGKTATFVIS 87
Query: 410 ILQTLDTTLRETQVLILSPTRELATQIQKV 499
ILQ +DT+L+ETQ LIL+PTRELA Q K+
Sbjct: 88 ILQRIDTSLKETQALILAPTRELAQQEWKL 117
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 137 bits (331), Expect = 4e-31
Identities = 73/189 (38%), Positives = 108/189 (57%)
Frame = +2
Query: 227 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 406
E + F+ + + +E+ + I GFE+PS IQ ++I I+ G DVI QAQ+GTGKTA F I
Sbjct: 3 EAMIKFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGI 62
Query: 407 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
+++ + T R Q LIL+PTRELA Q+ I L ++ GG ++ I+ L
Sbjct: 63 PVVEKVSTG-RHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKALK 121
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
G VV GTPGR+ D +RR+ L + ++LDEADEML+ GF + I + R + Q
Sbjct: 122 QGVQVVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLDMGFIDDIESILRQVKNERQT 181
Query: 767 CAYISNTTP 793
+ + P
Sbjct: 182 LLFSATMPP 190
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 137 bits (331), Expect = 4e-31
Identities = 76/186 (40%), Positives = 105/186 (56%), Gaps = 1/186 (0%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF +GL LL+ + + G+E P+ IQ ++I+ ++ G DV+ AQ+GTGKTA FS+ +L
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLS 65
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 595
+DTT + Q L+L PTRELA Q+ + + N GG ++ +R L
Sbjct: 66 RIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALKQNP 125
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
V+ GTPGRV D +RR L +K LVLDEADEML GF E I + + P Q A
Sbjct: 126 QVIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLRMGFIEDIDWILEHTPKDKQ-TAL 184
Query: 776 ISNTTP 793
S T P
Sbjct: 185 FSATMP 190
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 136 bits (330), Expect = 5e-31
Identities = 72/167 (43%), Positives = 102/167 (61%), Gaps = 2/167 (1%)
Frame = +2
Query: 233 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSIS 409
+ F+ +GL LL G+ GFE P+ IQQ+SI ++K D I AQ+GTGKTA F +
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLP 71
Query: 410 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLD 586
+L +D RE Q LIL+PTRELA QI + + + + GG N+ IR +
Sbjct: 72 LLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIR 131
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQI 727
G ++ TPGR+ D+++RR ++ ++K +VLDEADEMLN GFKE I
Sbjct: 132 RGAQIIVATPGRLMDLMKRREVKLDALKYMVLDEADEMLNMGFKEDI 178
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 136 bits (329), Expect = 6e-31
Identities = 70/185 (37%), Positives = 106/185 (57%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F +G+ E + + GF P+ IQ ++I ++ GRDV+ Q+Q+GTGKTA FS+ IL+
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
LD + Q ++L+PTRELA Q+ + ++ A GG ++ + +L G H
Sbjct: 64 RLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVH 123
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
+V GTPGRV D++ R L+ +K VLDEADEML+ GF + + + P Q A
Sbjct: 124 IVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQDRQ-TALF 182
Query: 779 SNTTP 793
S T P
Sbjct: 183 SATMP 187
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 136 bits (328), Expect = 8e-31
Identities = 69/175 (39%), Positives = 109/175 (62%), Gaps = 1/175 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F +GL+ +L IYT G++KP+ IQ +S+ I++G+D + +A++GTGKTA F+I LQ
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQH 66
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 598
L ++ QVLIL+P REL QI + + LG + N + GG L ++K +G
Sbjct: 67 LRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKL-SGVKKSLHGAQ 125
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
V+S TPGR+ D+ + +L + I MLV+DEAD + + GF+E + + + LP + Q
Sbjct: 126 VISATPGRLIDIKEQGLLNSNCINMLVIDEADRLFDMGFREAVTSILKDLPKSVQ 180
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 135 bits (327), Expect = 1e-30
Identities = 77/200 (38%), Positives = 108/200 (54%), Gaps = 3/200 (1%)
Frame = +2
Query: 203 EFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGT 382
+ D +EDV F + LR ELLR + G+E+P+ IQ+ ++ P+V GRD++ QA +GT
Sbjct: 49 DIDPAEDVA---GFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGT 105
Query: 383 GKTATFSISILQTLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 553
GKTA F++ +L L T Q L+L PTRELA Q+ + I G + + GG
Sbjct: 106 GKTAAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGG 165
Query: 554 TNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYD 733
+G +R L G VV TPGR D + R LR + +VLDEADEML+ GF E I
Sbjct: 166 APIGRQVRALVQGVDVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLDMGFAEDIDA 225
Query: 734 VYRYLPPATQGCAYISNTTP 793
+ P Q + + P
Sbjct: 226 ILEQAPQKRQTVLFSATLPP 245
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 135 bits (327), Expect = 1e-30
Identities = 74/179 (41%), Positives = 105/179 (58%)
Frame = +2
Query: 227 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 406
+++ T + + + L+ T +KPSA+ QR I+P+ G D+I Q+ GT T T
Sbjct: 45 DIVTTQGAQFISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCC 102
Query: 407 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
ILQ LD E Q L+L PT +LA + Q VI LG F++ + HA GGT+ ED + L
Sbjct: 103 GILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQILS 162
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
G V GTP V M++ R L I+M VLDEADE+L +GFK+QI+ + ++LP TQ
Sbjct: 163 TGVQVAVGTPCHVLGMLQGRALCPDHIRMFVLDEADEVL-RGFKDQIHGIIQFLPTKTQ 220
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 135 bits (326), Expect = 1e-30
Identities = 65/175 (37%), Positives = 107/175 (61%), Gaps = 1/175 (0%)
Frame = +2
Query: 233 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSIS 409
+ F+S GL ++ + GF P+ IQ++++ ++ G D I A +GTGKTA F I
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIP 102
Query: 410 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
+++ +D+T+++TQ L+LSPTRELA Q+ + + LG V+ GG + I +
Sbjct: 103 LIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGIKR 162
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 754
G H+V TPGR+ D + +++++ +S+K +VLDEADEML+ GFKE + + P
Sbjct: 163 GAHIVVATPGRLVDFLEQKMIKLQSVKTVVLDEADEMLSMGFKEALETILSATQP 217
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 135 bits (326), Expect = 1e-30
Identities = 79/194 (40%), Positives = 112/194 (57%), Gaps = 3/194 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F +GL +++ + G+E P+ IQQ +I I+ GRDV+ QAQ+GTGKTA F++ ++
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 422 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACI-GGTNLGEDIRKLDYG 592
+D R+ QVL+L+PTRELA Q+ + A + ACI GG G IR L G
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQG 128
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCA 772
VV GT GRV D I + L+ +++ LVLDEADEML GF + + V ++ Q
Sbjct: 129 VKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVKFVLSHVSDECQRLL 188
Query: 773 YISNTTP*DIGNDI 814
+ S T P DI + I
Sbjct: 189 F-SATIPTDIADII 201
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 135 bits (326), Expect = 1e-30
Identities = 63/184 (34%), Positives = 112/184 (60%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F + L ++R ++ GFE+ + IQ+++I ++G+D+I QA++GTGKTA F I +++
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 601
+ T + Q L++ PTRELA Q+ + + +G ++ A GG + ++ L+ H+
Sbjct: 64 IRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKALEELPHI 123
Query: 602 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYIS 781
V GTPGR+ + +RR +RT I++ VLDEAD+ML+ GF ++ + + LP Q + +
Sbjct: 124 VVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPERRQTLLFSA 183
Query: 782 NTTP 793
+P
Sbjct: 184 TLSP 187
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 134 bits (325), Expect = 2e-30
Identities = 71/186 (38%), Positives = 110/186 (59%), Gaps = 1/186 (0%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F+ M L +L + F P+ IQ ++I +++G+DV+ +AQ+GTGKTA F + L
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALA 68
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 595
+D ++++TQVL+++PTRELA Q+ + + M V GG G ++ L G
Sbjct: 69 KIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQVKALKQGT 128
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
+V GTPGR+ D++ + VL+ +K+ VLDEADEMLN GF E I + + +P Q A
Sbjct: 129 AIVVGTPGRLIDLLNKNVLQLDGLKVGVLDEADEMLNMGFIEDIETILKAVPNTAQR-AL 187
Query: 776 ISNTTP 793
S T P
Sbjct: 188 FSATMP 193
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 134 bits (325), Expect = 2e-30
Identities = 71/178 (39%), Positives = 106/178 (59%), Gaps = 4/178 (2%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F+S L + + + GF +P+ IQ +SI PI+ G DV+A AQ+GTGKTA F I +L T
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 422 LDTTLR----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
L + + L+++PTRELA QI +V +G + ++ GG I DY
Sbjct: 63 LINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRTVCITGGVEQEAQIAAADY 122
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
G ++ TPGR+FD+I ++ ++ +K+LVLDEAD ML+ GF + I DV ++LP Q
Sbjct: 123 GIDILVATPGRMFDLIYQKHIKITRVKILVLDEADHMLDLGFIKDIQDVKKFLPARHQ 180
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 134 bits (325), Expect = 2e-30
Identities = 76/211 (36%), Positives = 128/211 (60%), Gaps = 3/211 (1%)
Frame = +2
Query: 140 KMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQ 319
K S + S+ + L++++ D + + +FD +GL ELL+GIY F+KPS IQ
Sbjct: 60 KQEDSNLISSEYEVKVKLADIQADPNSPLYSAKSFDELGLAPELLKGIYAMKFQKPSKIQ 119
Query: 320 QRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQ 493
+R++ ++ R++IAQ+QSGTGKTA FS+++L ++ Q + L+P+RELA Q
Sbjct: 120 ERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTL 179
Query: 494 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKM 673
+V+ +G F + + + E ++++ V+ GTPG V D++RR++++ + IK+
Sbjct: 180 EVVQEMGKFTKITSQLIV--PDSFEKNKQIN--AQVIVGTPGTVLDLMRRKLMQLQKIKI 235
Query: 674 LVLDEADEMLN-KGFKEQIYDVYRYLPPATQ 763
VLDEAD ML+ +G +Q V R+LP TQ
Sbjct: 236 FVLDEADNMLDQQGLGDQCIRVKRFLPKDTQ 266
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 134 bits (324), Expect = 3e-30
Identities = 77/188 (40%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
Frame = +2
Query: 233 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 412
I F + + L + + F PS IQ ++I I++GRD IA AQ+GTGKTA F++ I
Sbjct: 5 ISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPI 64
Query: 413 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDY 589
LQ L + TQ LIL+PTRELA Q+ + L + NV GG G +++L
Sbjct: 65 LQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLRS 124
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
G VV GTPGR+ D I + L ++K +LDEADEML GF E + + LP Q
Sbjct: 125 GAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEKKQ-M 183
Query: 770 AYISNTTP 793
A S T P
Sbjct: 184 ALFSATMP 191
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 134 bits (324), Expect = 3e-30
Identities = 61/171 (35%), Positives = 107/171 (62%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF+ L +++L+ + + G+ PS +Q+ I ++KG++++ ++++G+GKTA+F+I + +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
++ Q LI+ PTRELA Q++ I +G V+C A G ++ + I +L H
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVH 123
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 751
+V TPGR+ D I R ++ ++K LV+DEAD+M NKGF EQ+ + LP
Sbjct: 124 IVVATPGRILDHINRGSIKLENVKYLVIDEADKMFNKGFVEQMEKILLNLP 174
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 134 bits (324), Expect = 3e-30
Identities = 67/184 (36%), Positives = 107/184 (58%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F +G+ +E+ + +P+ +Q ++I P++ RDV+AQAQ+GTGKT F + IL+
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 601
++ Q LI++PTRELA QI L + + A GG ++ + +RKL H+
Sbjct: 65 VNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKGSIHI 124
Query: 602 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYIS 781
+ GTPGR+ D +RR+ + + MLVLDEAD+ML+ GF + D+ ++P Q + S
Sbjct: 125 IIGTPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIPKRRQN-MFFS 183
Query: 782 NTTP 793
T P
Sbjct: 184 ATMP 187
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 134 bits (323), Expect = 3e-30
Identities = 78/217 (35%), Positives = 119/217 (54%), Gaps = 1/217 (0%)
Frame = +2
Query: 146 TSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQR 325
+++E S+ +E + V D ++ E FD G + LL+ + G+ PS IQ+
Sbjct: 42 STAEPSTTEASTTEVTAEVTADEAKS-EPQSGFDGFGFSEALLKTLADKGYSDPSPIQKA 100
Query: 326 SILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVIL 505
+ ++ GRD++ QAQ+GTGKTA F++ +L+ L++ + QVL+L+PTRELA Q+
Sbjct: 101 AFPELMLGRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADSFK 160
Query: 506 A-LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 682
A +++ A GGT+ I L G VV GTPGRV D +R+ L T + LVL
Sbjct: 161 AYAAGHPHLKVLAVYGGTDFRSQISTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVL 220
Query: 683 DEADEMLNKGFKEQIYDVYRYLPPATQGCAYISNTTP 793
DEADEML GF + + + LP Q + + P
Sbjct: 221 DEADEMLRMGFIDDVEWILEQLPKERQVVLFSATMPP 257
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 134 bits (323), Expect = 3e-30
Identities = 70/189 (37%), Positives = 107/189 (56%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
FD M L + + + G+ P+ +Q R+ P ++G+D+I ++++GTGKTA F + +L+
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 601
+ R + LIL PTRELA Q+ + L ++ A GG ++ + L+ G +
Sbjct: 91 IPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMKQQEDALEEGTPI 150
Query: 602 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYIS 781
+ GTPGRVFD I R L+ + VLDEADEMLN+GF E++ + LP Q + S
Sbjct: 151 IVGTPGRVFDHINRGNLKLDACDHAVLDEADEMLNQGFYEEVTRILDRLPKTRQVLLF-S 209
Query: 782 NTTP*DIGN 808
T P DI N
Sbjct: 210 ATVPTDIQN 218
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 134 bits (323), Expect = 3e-30
Identities = 74/185 (40%), Positives = 107/185 (57%), Gaps = 1/185 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F ++G+ +L I G+E+PS IQ ++I I+ G D+I QAQ+GTGKTA F++ +L
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSR 84
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 598
+D RE Q+LIL+PTRELA Q+ + V A GG +G ++ L G
Sbjct: 85 IDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLKALRQGAQ 144
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
++ TPGR+ D +RR ++K LVLDEADEML GF E + ++ LP + Q +
Sbjct: 145 ILVATPGRLCDHLRRDEQLLSTVKHLVLDEADEMLKLGFMEDLEVIFAALPESRQTVLF- 203
Query: 779 SNTTP 793
S T P
Sbjct: 204 SATLP 208
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 134 bits (323), Expect = 3e-30
Identities = 67/185 (36%), Positives = 106/185 (57%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF L +L++ I GFE+ + IQ ++I + +DVI QAQ+GTGKTA F I +++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
++ Q ++++PTRELA Q+ + + +G + GG ++G IR L +
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPN 123
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
++ GTPGR+ D I RR +R ++ +V+DEADEMLN GF + I + +P Q +
Sbjct: 124 IIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLF- 182
Query: 779 SNTTP 793
S T P
Sbjct: 183 SATMP 187
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 133 bits (322), Expect = 5e-30
Identities = 76/187 (40%), Positives = 107/187 (57%), Gaps = 2/187 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+FD + L + R + GF PS IQ I + G+DVI QA++GTGKTA FSI IL+
Sbjct: 45 SFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPILE 104
Query: 419 TLDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 592
LD+ R+ Q +++ PTRELA Q+ L + + GG N+ +R+L+ G
Sbjct: 105 QLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKNMNRQLRQLENG 164
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCA 772
+V GTPGRV D ++R LRT ++ +VLDEAD ML+ GF+ QI + R P Q
Sbjct: 165 TQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADRMLDIGFRPQIERIMRKCPRNRQ-TL 223
Query: 773 YISNTTP 793
+S T P
Sbjct: 224 LLSATLP 230
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 133 bits (322), Expect = 5e-30
Identities = 72/184 (39%), Positives = 108/184 (58%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F +GL LL+ + GFE P+ IQ+ +I I++G +++ QA +GTGKTA + + +LQ
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 601
+ ++ QVLI++PTRELA Q+ + LG ++ V+ A GG + IR L G V
Sbjct: 64 IQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEV 122
Query: 602 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYIS 781
+ GTPGR+ D I R+ IK+++LDEADEML+ GF + I + L Q + S
Sbjct: 123 IVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLF-S 181
Query: 782 NTTP 793
T P
Sbjct: 182 ATLP 185
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 133 bits (322), Expect = 5e-30
Identities = 68/186 (36%), Positives = 101/186 (54%), Gaps = 1/186 (0%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F +GL +L + G+E PS IQ +SI ++ G ++ AQ+GTGKTA F++ +L
Sbjct: 25 SFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLS 84
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNVQCHACIGGTNLGEDIRKLDYGQ 595
+D + E Q+L+L+PTRELA Q+ + F N GG + IR L G
Sbjct: 85 RIDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSPQIRGLKRGA 144
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
V+ GTPGR+ D +R+ L+ +K LVLDEADEML GF + + + P Q +
Sbjct: 145 QVIVGTPGRMLDHLRKGTLKLDGLKALVLDEADEMLRMGFIDDVEAILAKTPDTCQRALF 204
Query: 776 ISNTTP 793
+ P
Sbjct: 205 SATMPP 210
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 133 bits (322), Expect = 5e-30
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 1/185 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F+S+GL D L + + G+E + IQ +I +++GRDV+ AQ+GTGKTA F++ IL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 598
+D +R Q L+L PTRELA Q+ + + G M ++ + GG ++ + ++ L G H
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTH 130
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
+V TPGR+ D I RR + I +VLDEADEML GF + + D P + A
Sbjct: 131 IVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDV-DTILAKTPKERKVALF 189
Query: 779 SNTTP 793
S T P
Sbjct: 190 SATMP 194
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 133 bits (322), Expect = 5e-30
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 6/185 (3%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+FDS+GL ++LR + G+ +P+ IQQ++I +++GRD++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 419 TLDTTL------RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRK 580
L T R + LIL+PTRELA QI + + ++N++ GG ++ + K
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 581 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 760
L G V+ TPGR+ D+ + ++ +++LVLDEAD ML+ GF I V LP
Sbjct: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181
Query: 761 QGCAY 775
Q +
Sbjct: 182 QNLLF 186
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 133 bits (321), Expect = 6e-30
Identities = 67/175 (38%), Positives = 101/175 (57%), Gaps = 1/175 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F SMGL + L G+ G+ P+ IQ+++I I++G D+IA A++G+GKTA + + I+
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 422 LDTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
L+T E + LI+ PTRELA Q KV LG N++ IGG+ L + L G
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSDQFDNLSSGPD 134
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
++ TPGR+ ++ + ++M+ DEAD M GF EQ+ D+ R LPP Q
Sbjct: 135 IIVATPGRLTFILEGANISLNRVEMVCFDEADLMFESGFSEQVSDIMRMLPPTRQ 189
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 133 bits (321), Expect = 6e-30
Identities = 74/179 (41%), Positives = 101/179 (56%), Gaps = 1/179 (0%)
Frame = +2
Query: 218 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 397
ED + + TF S+GL +E+L + GF P+ IQ +I P+++ RDV+ AQ+GTGKTA
Sbjct: 40 EDTDTV-TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTAA 98
Query: 398 FSISILQTLDTTLRETQVLILSPTRELATQIQKVILAL-GDFMNVQCHACIGGTNLGEDI 574
F + +L +D R Q L+L+PTRELA Q + I + GG+ G I
Sbjct: 99 FGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGPQI 158
Query: 575 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 751
L G VV GTPGRV D+I + L ++MLVLDEADEML GF E + + P
Sbjct: 159 GALKRGAQVVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLRMGFAEDVETIASSAP 217
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 132 bits (320), Expect = 8e-30
Identities = 74/188 (39%), Positives = 107/188 (56%), Gaps = 1/188 (0%)
Frame = +2
Query: 233 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 412
I +F + LR LL + G+E PS IQ I ++ G D++ +AQ+GTGKTA F++ +
Sbjct: 43 IESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPL 102
Query: 413 LQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDY 589
L LD ++ QVL+L+PTRELA Q+ + + GG ++ +R+L
Sbjct: 103 LDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLAR 162
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
G HV+ GTPGRV D I R+ L S+ LVLDEADEML GF + + + ++ PA +
Sbjct: 163 GAHVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEMLRMGFIDDVEWILQH-TPAERQT 221
Query: 770 AYISNTTP 793
A S T P
Sbjct: 222 ALFSATMP 229
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 132 bits (320), Expect = 8e-30
Identities = 73/186 (39%), Positives = 104/186 (55%), Gaps = 1/186 (0%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF+ +GL + +L+ + GFE PS IQQ I ++ G DV+ AQ+G+GKTA F++ +L
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVI-LALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
+D + + Q+L+++PTRELA Q+ L + + GG +R L G
Sbjct: 66 QIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGA 125
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
VV GTPGR+ D IRR L ++ +VLDEADEML GF + + V LP Q A
Sbjct: 126 QVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENHQ-TAL 184
Query: 776 ISNTTP 793
S T P
Sbjct: 185 FSATMP 190
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 132 bits (319), Expect = 1e-29
Identities = 71/190 (37%), Positives = 111/190 (58%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF+ +G+ +L+ I GF+ P+ +Q ++I I+ D+I +++G+GKTA F +SILQ
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
+ Q LIL+P RELA Q+ I + ++ + A G N+ + + L+ G
Sbjct: 64 LTNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQHNINLETQILNKGVS 123
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
+V+GTPGRVFD I L T++I+ LVLDEAD ML+ GF +Q+ + + LP +
Sbjct: 124 IVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDMGFLDQVVRIVKTLPKERITLLF- 182
Query: 779 SNTTP*DIGN 808
S T P +I N
Sbjct: 183 SATMPPEIHN 192
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 132 bits (318), Expect = 1e-29
Identities = 70/167 (41%), Positives = 101/167 (60%), Gaps = 2/167 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F ++ L L GI G+ + +Q +S+ PI++G DVIAQA +G+GKTA F + +LQ
Sbjct: 28 FSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQK 87
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLD-YGQ 595
LD L Q L+L PTRELA Q+ K + L N++ GG LG + L+ +
Sbjct: 88 LDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDP 147
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDV 736
HVV GTPGR+ ++ R+R L ++ LVLDEAD ML+ GF+E I ++
Sbjct: 148 HVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREI 194
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 132 bits (318), Expect = 1e-29
Identities = 68/169 (40%), Positives = 100/169 (59%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F L DELL+ I FE P+ +QQ+ I I++ +D+I ++Q+G+GKTA F+I I Q
Sbjct: 6 FSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPICQL 65
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 601
+D + Q L+L PTRELA Q+++ + +G F ++ A G ++L HV
Sbjct: 66 VDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQKTHV 125
Query: 602 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYL 748
V GTPGR+ D + + T IK LV+DEADEM N GF +QI + + L
Sbjct: 126 VVGTPGRIIDHMEKGTFDTSQIKYLVIDEADEMFNMGFVDQIETIIKDL 174
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 132 bits (318), Expect = 1e-29
Identities = 70/185 (37%), Positives = 106/185 (57%), Gaps = 1/185 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F+ +GL + +L + + G+E PS IQ++ I ++ +D+I QAQ+GTGKTA F + +L
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 598
++ + Q+LIL+PTRELA Q+ + + M GG + +R L G H
Sbjct: 74 INLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRPLKRGVH 133
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
+ GTPGRV D I ++ L+ ++K VLDEADEML GF + I + + +P Q A
Sbjct: 134 AIVGTPGRVMDHIEKKTLKLDNLKSFVLDEADEMLKMGFIDDIKWIMQRIPEQRQ-IALF 192
Query: 779 SNTTP 793
S T P
Sbjct: 193 SATMP 197
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 132 bits (318), Expect = 1e-29
Identities = 72/200 (36%), Positives = 123/200 (61%), Gaps = 5/200 (2%)
Frame = +2
Query: 191 LSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG--RDVIA 364
L++++ D + + + +F + L ++L++GI GF+KPS IQ++++ ++ R++I
Sbjct: 133 LADLQGDPNSPLYSVQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIG 192
Query: 365 QAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHAC 544
Q+QSGTGKTA F++++L +D T+ Q + ++P+RELA QIQ+VI +G F V
Sbjct: 193 QSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQVGTFLA 252
Query: 545 IGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR--RVLRTRSIKMLVLDEADEML-NKGF 715
I G+ R + ++ GTPG + DM+ R R+L R I++LVLDEADE++ +G
Sbjct: 253 IPGS----WSRNSRIDKQILIGTPGTLVDMLMRGSRILDPRMIRVLVLDEADELIAQQGL 308
Query: 716 KEQIYDVYRYLPPATQGCAY 775
EQ + + + LPP Q +
Sbjct: 309 GEQTFRIKQLLPPNVQNVLF 328
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 131 bits (317), Expect = 2e-29
Identities = 71/177 (40%), Positives = 114/177 (64%), Gaps = 2/177 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISIL 415
+F S+ L D++ +G+ GF+KPS IQ ++I P+ + G D+I +++SGTGKT FS L
Sbjct: 25 SFASLLLPDDIKQGLSVSGFKKPSPIQFKAI-PLGRCGFDLIVKSKSGTGKTLVFSTIAL 83
Query: 416 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDYG 592
+T++T QVLIL PTRE+A QI+ V+ ++G +N ++ + IGG L +D++K
Sbjct: 84 ETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIGGRPLEDDLKK-SSK 142
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
H+ G PGRV +++ L T +K+ VLDEAD+++ + F+ I ++Y LPP Q
Sbjct: 143 CHIAVGAPGRVKHLLKMGALTTNLVKLFVLDEADKLMEESFQSDINEIYNSLPPRKQ 199
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 131 bits (317), Expect = 2e-29
Identities = 70/185 (37%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F+ L+ ELL GI+ G+E PS+IQ+ SI + GRD++A+A++GTGK+ + I +L+
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 142
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 598
LD Q +++ PTRELA Q+ ++ + + M + A GGTNL +D+ +LD H
Sbjct: 143 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDVMRLDDTGH 202
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
VV TPGR+ D+I++ + + ++M+VLDEAD++L++ F QI + + P +
Sbjct: 203 VVIATPGRILDLIKKCLEKVDHVQMVVLDEADKLLSQDF-VQIMEAFILTLPKNRQILLY 261
Query: 779 SNTTP 793
S T P
Sbjct: 262 SATFP 266
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 131 bits (317), Expect = 2e-29
Identities = 74/187 (39%), Positives = 103/187 (55%), Gaps = 1/187 (0%)
Frame = +2
Query: 236 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 415
P F + L + LLR + G+E PS IQ +I ++ RDV+ QAQ+GTGKTA+F++ IL
Sbjct: 7 PLFADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPIL 66
Query: 416 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG 592
+D Q L+L+PTRELA Q+ + ++ GG + G + L G
Sbjct: 67 ARIDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRG 126
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCA 772
HVV GTPGRV D + + L IK +VLDEADEML GF + + + + P + Q A
Sbjct: 127 VHVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPESRQ-TA 185
Query: 773 YISNTTP 793
S T P
Sbjct: 186 LFSATMP 192
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 131 bits (317), Expect = 2e-29
Identities = 67/177 (37%), Positives = 102/177 (57%)
Frame = +2
Query: 233 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 412
+ +F + L++ + +G++ S IQ +++P++KGRD+I Q+ SGTGKT + I
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKGRDIIYQSPSGTGKTTCYIIGT 68
Query: 413 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 592
L ++ Q LIL PTREL+ QI+ V L + +C GG LGED++ L
Sbjct: 69 SNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIYTKNSITSCHGGRWLGEDLKNLKKN 128
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
H + GTPGRV +++ L I+ VLDEAD ++NK FK I+++YRYL Q
Sbjct: 129 FHGIVGTPGRVLHLLQIGSLAITKIRTFVLDEADILMNKNFKIDIFNIYRYLNSKVQ 185
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 131 bits (316), Expect = 2e-29
Identities = 68/175 (38%), Positives = 104/175 (59%), Gaps = 1/175 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISILQ 418
F M ++ E+L+ + GFEKP+ IQ+ ++LP +G+D+I QAQ+GTGKTA F+I IL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQE-AVLPFAFEGKDIIGQAQTGTGKTAAFAIPILS 61
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
LD ++ Q L+++PTRELA QI + LG + + +GG + + L+ G +
Sbjct: 62 NLDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALNSGVN 121
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
+V TPGR+ D++ + + IK LDEADE+L GF +I + LP Q
Sbjct: 122 IVVATPGRLEDLLAQNKIDLSHIKTFTLDEADELLKIGFYNEIIKIMNKLPKKRQ 176
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 131 bits (316), Expect = 2e-29
Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 1/189 (0%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F S+ L E L + G+ + + +Q ++ ++ G DV A+A++G+GKTA F I +L
Sbjct: 5 SFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGLLD 64
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQ 595
+ + TQ L+L PTRELA Q+ K + L F N++ GG +G+ + L +
Sbjct: 65 RIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSLVHAP 124
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
H+V GTPGR+ D +R++ L S+K+LVLDEAD ML+ GF + I DV Y P Q +
Sbjct: 125 HIVVGTPGRIQDHLRKQSLALDSLKVLVLDEADRMLDMGFTDAIDDVISYTPSDRQTLLF 184
Query: 776 ISNTTP*DI 802
S T P +I
Sbjct: 185 -SATYPQEI 192
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 131 bits (316), Expect = 2e-29
Identities = 70/163 (42%), Positives = 97/163 (59%), Gaps = 1/163 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD-VIAQAQSGTGKTATFSISILQ 418
F MGL D +L I G+E P+ IQ++ I ++ G++ VI QAQ+GTGKTA F I +++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
LD + Q L+L+PTRELA Q+ I +L + GG ++G IR L
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKRRVD 123
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQI 727
+V GTPGR+ D + R L IK LV+DEADEML+ GF E +
Sbjct: 124 LVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIEDV 166
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 131 bits (316), Expect = 2e-29
Identities = 68/174 (39%), Positives = 100/174 (57%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F + ++ R + GFE + IQ ++ + G DV+ +AQ+GTGKTA F+I +L+
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLEN 65
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 601
L+ R Q LI+ PTREL Q+ + I +G +M V+ A GG ++G I +L G HV
Sbjct: 66 LEAE-RVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRRGVHV 124
Query: 602 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
+ TPGR+ D I R + I +VLDEADEMLN GF + I + ++P Q
Sbjct: 125 IVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILSHVPERRQ 178
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 130 bits (313), Expect = 6e-29
Identities = 61/87 (70%), Positives = 72/87 (82%)
Frame = +2
Query: 227 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 406
E+ FD M L++ LLRGIY YGFEKPSAIQQR+I+P +KG DVIAQAQSGTGKTATF+I
Sbjct: 32 EITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 91
Query: 407 SILQTLDTTLRETQVLILSPTRELATQ 487
SILQ L+ +ETQ L+L+PTRELA Q
Sbjct: 92 SILQQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 130 bits (313), Expect = 6e-29
Identities = 72/211 (34%), Positives = 122/211 (57%), Gaps = 5/211 (2%)
Frame = +2
Query: 176 ILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD 355
+ ++D S + + D TF+ + L E +R I G+ P+ IQ +I +++G+D
Sbjct: 4 VSAKDHSPIISNLKNDNNNTLTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKD 63
Query: 356 VIAQAQSGTGKTATFSISILQTL---DTTLR-ETQVLILSPTRELATQIQKVILALGDFM 523
++A AQ+GTGKTA F + I++ L D R + L+L+PTRELA Q++ A ++
Sbjct: 64 IMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYL 123
Query: 524 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEML 703
++ A GG ++ +++L G ++ TPGR+ D+I ++++R ++K+LVLDEAD ML
Sbjct: 124 ALRSDAVFGGVSIRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRML 183
Query: 704 NKGFKEQIYDVYRYLPPATQGCAYISN-TTP 793
+ GF I V YLP Q + + +TP
Sbjct: 184 DMGFIRDIKKVIEYLPKNRQNMMFSATFSTP 214
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 129 bits (312), Expect = 7e-29
Identities = 76/187 (40%), Positives = 107/187 (57%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F SMGL+ +LL+ I GFEKP+ IQ +SI + G D++ QAQ+GTGKTA+F I IL
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 601
+ Q L+L PTRELA Q+ + I +L M +Q A GG ++ +R L +
Sbjct: 66 VIKG-EGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNPEI 124
Query: 602 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYIS 781
+ GTPGR+ D + R + +K +VLDEADEML+ GF I + P Q + S
Sbjct: 125 IVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCPRERQTFLF-S 183
Query: 782 NTTP*DI 802
T P ++
Sbjct: 184 ATLPDEV 190
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 129 bits (312), Expect = 7e-29
Identities = 68/188 (36%), Positives = 107/188 (56%), Gaps = 3/188 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF+S+GL L+ + G+E+P+ IQ+ ++ P+++G+D++ A +GTGKTA FS+ +LQ
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLPLLQ 96
Query: 419 TLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
+ L+L PTRELA Q+ + I G + + GG + + +R L
Sbjct: 97 RITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQLRVLKR 156
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
G VV TPGR D ++R+ L+ ++++VLDEADEML+ GF E + + P Q
Sbjct: 157 GVDVVVATPGRALDHLQRKTLKLEQVRVVVLDEADEMLDMGFAEDLEAILSSTPEKRQ-T 215
Query: 770 AYISNTTP 793
A S T P
Sbjct: 216 ALFSATLP 223
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 129 bits (312), Expect = 7e-29
Identities = 68/184 (36%), Positives = 104/184 (56%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F +G+ D ++ + + GF++P+ IQ+ SI ++G D++ QAQ+GTGKT F I +++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 601
+ + Q LIL+PTRELA Q+ + + VQ GG + I+ L G +
Sbjct: 64 V-VGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQI 122
Query: 602 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYIS 781
V GTPGRV D + RR L+T I L+LDEADEM+N GF + + + +P + S
Sbjct: 123 VVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFS 182
Query: 782 NTTP 793
T P
Sbjct: 183 ATMP 186
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 129 bits (311), Expect = 1e-28
Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 9/213 (4%)
Frame = +2
Query: 182 SEDLSNVEFDTSEDVEVIPT-------FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI 340
S+ LS+VE DT E V F SMGL + +G+ G++ P+ IQ+++I I
Sbjct: 12 SDYLSDVEPDTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVI 71
Query: 341 VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET--QVLILSPTRELATQIQKVILALG 514
+ G+DV+A A++G+GKTA F I + + L +T + LILSPTRELA Q K LG
Sbjct: 72 LDGKDVVAMARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMKFTKELG 131
Query: 515 DFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEAD 694
F ++ +GG ++ + L ++ GTPGR+ +I+ L+ ++++ +V DEAD
Sbjct: 132 KFTKLKTALILGGDSMDDQFAALHENPDIIIGTPGRLMHVIKEMNLKLQNVEYVVFDEAD 191
Query: 695 EMLNKGFKEQIYDVYRYLPPATQGCAYISNTTP 793
+ GF EQ+ ++ R P Q + S T P
Sbjct: 192 RLFEMGFAEQLQEIIRRFPETRQTLLF-SATLP 223
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 129 bits (311), Expect = 1e-28
Identities = 75/191 (39%), Positives = 107/191 (56%), Gaps = 2/191 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F G +L + G++ P+ IQ+ +I ++ GRD++ QAQ+GTGKTA F++ +++
Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112
Query: 422 L-DTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDYGQ 595
L D +VL+++PTRELATQ+ + + + N + A GGT+ I L
Sbjct: 113 LADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYALKRKV 172
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
VV GTPGR+ D IR+ + SI LVLDEADEMLN GF E I + LP Q
Sbjct: 173 DVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQLPKNKQ-MVL 231
Query: 776 ISNTTP*DIGN 808
S T P +I N
Sbjct: 232 FSATMPNEIRN 242
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 128 bits (310), Expect = 1e-28
Identities = 69/191 (36%), Positives = 106/191 (55%), Gaps = 1/191 (0%)
Frame = +2
Query: 233 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 412
IP+F + L +++ I G+E+P+ IQQ I I+ G DV QA +GTGKTA F I
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPA 62
Query: 413 LQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDY 589
++ R Q ++L P+RELA Q+ + L + GG + I+ L
Sbjct: 63 IELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKALSR 122
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
G ++ GTPGRV D I+R+ L ++ ++VLDEAD+ML+ GF+E I ++ ++P Q
Sbjct: 123 GVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFREDIEEILSHIPKERQ-T 181
Query: 770 AYISNTTP*DI 802
+S T P +I
Sbjct: 182 VILSATFPPEI 192
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 128 bits (310), Expect = 1e-28
Identities = 78/190 (41%), Positives = 114/190 (60%), Gaps = 6/190 (3%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISILQ 418
F S+ L +L G+ GF++PS IQ ++I P+ + G D+I QA+SGTGKT F+ L
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAI-PLGRCGLDLIVQAKSGTGKTCVFTTIALD 86
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 595
+L TQVL+L+PTRE+A QI V++A+G M ++CH IGG + +D + L
Sbjct: 87 SLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHLK-KC 145
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEML----NKGFKEQIYDVYRYLPPATQ 763
H+ G+PGR+ +I L SI++ VLDEAD++L + F+EQI +Y LP Q
Sbjct: 146 HIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLPANKQ 205
Query: 764 GCAYISNTTP 793
A +S T P
Sbjct: 206 MLA-LSATYP 214
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 128 bits (309), Expect = 2e-28
Identities = 63/183 (34%), Positives = 110/183 (60%), Gaps = 4/183 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F S+GL + + + G++ PS IQ ++I ++ G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 419 TLDTTLR----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
L + + + L+L+PTRELA Q+ + + G ++ ++ GG + I+KL
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLR 121
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
+G V+ TPGR+ D++++ V++ +++LVLDEAD ML+ GF I + LP Q
Sbjct: 122 HGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQN 181
Query: 767 CAY 775
+
Sbjct: 182 LMF 184
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 128 bits (309), Expect = 2e-28
Identities = 72/191 (37%), Positives = 108/191 (56%), Gaps = 3/191 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF +GL +L+ + G+EKPS IQ+++I P + GRDV+ AQ+GTGKT F+ ILQ
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 419 TLDTTL---RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
L + R + LIL+PTRELA QIQ+ A G + ++ GG + KL
Sbjct: 62 RLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKK 121
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
G ++ TPGR+ D+ + + +++ VLDEAD ML+ GF + V + L PA +
Sbjct: 122 GVDILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLL-PAVKQT 180
Query: 770 AYISNTTP*DI 802
+ S T P ++
Sbjct: 181 LFFSATMPPEV 191
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 128 bits (308), Expect = 2e-28
Identities = 62/157 (39%), Positives = 100/157 (63%), Gaps = 1/157 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F+ L+ ELL GI+ G+EKPS IQ+ SI + GRD++A+A++GTGK+ + I +L+
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLER 150
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 598
+D Q L+L PTRELA Q+ ++ + + + V+ A GGTNL +DI +LD H
Sbjct: 151 IDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGTNLRDDIMRLDETVH 210
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNK 709
VV TPGR+ D++++ V + ++++V+DE + K
Sbjct: 211 VVIATPGRILDLMKKGVAKVDKVQIMVMDEVGKRTPK 247
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 128 bits (308), Expect = 2e-28
Identities = 64/189 (33%), Positives = 111/189 (58%), Gaps = 4/189 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F+ +GL +L+ I G+ +PSAIQ ++I I++G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
Query: 419 TL----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
L + + + L+L+PTRELA Q+ + + G ++++ GG + + L
Sbjct: 66 ILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALR 125
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
G ++ TPGR+ D+ ++ +R +++LVLDEAD ML+ GF I + LP Q
Sbjct: 126 RGADILIATPGRMMDLYNQKAVRFDKLEVLVLDEADRMLDMGFIHDIKKILAILPKKRQN 185
Query: 767 CAYISNTTP 793
+ + +P
Sbjct: 186 LLFSATFSP 194
>UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocystis
pacifica SIR-1|Rep: DEAD/DEAH box helicase -
Plesiocystis pacifica SIR-1
Length = 1390
Score = 128 bits (308), Expect = 2e-28
Identities = 83/227 (36%), Positives = 118/227 (51%), Gaps = 10/227 (4%)
Frame = +2
Query: 152 SEVSSNRKILSEDLSN-VEFDTSEDVEVIP-----TFDSMGLRDELLRGIYTYGFEKPSA 313
SEVS + ++ SE +S V ED E P T+D M L + + + G+ P+
Sbjct: 122 SEVSGHTEVDSELVSEAVAAPEGEDAEEEPDPAPETWDEMALPEHVRNAVDAAGWTAPTK 181
Query: 314 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL----QTLDTTLRETQVLILSPTRELA 481
+Q R+ +++G DV+ Q+Q+G+GKT F + L Q D Q+++L PTRELA
Sbjct: 182 VQARTYETMIQGTDVLVQSQTGSGKTGAFCLPWLANRFQPGDAAETGVQLIVLLPTRELA 241
Query: 482 TQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTR 661
Q+ ++ L V GGT + + L G H V GTPGRV D IRR+ L
Sbjct: 242 KQVCNELVRLAIETPVDVLPVYGGTAMNPQLDALARGVHAVVGTPGRVLDHIRRKSLDLS 301
Query: 662 SIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYISNTTP*DI 802
++ +VLDE DEML+ GF E I + R P Q C + S T P DI
Sbjct: 302 KVRTVVLDECDEMLSMGFLEDIRAILRACPKERQTCLF-SATVPRDI 347
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 128 bits (308), Expect = 2e-28
Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 1/188 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F + + E+ + + GFE+ S IQ +I I+ +DV QAQ+GTGKTA F I +L+
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLEN 65
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 598
+D+ Q +IL PTRELA Q+ + + L ++ + GG + I+ L G
Sbjct: 66 IDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGVQ 125
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
++ GTPGRV D I R L +IK ++LDEADEML+ GF+E I + +P Q +
Sbjct: 126 IIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYILEDIPYERQFLLF- 184
Query: 779 SNTTP*DI 802
S T P +I
Sbjct: 185 SATLPQEI 192
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 127 bits (307), Expect = 3e-28
Identities = 68/183 (37%), Positives = 106/183 (57%), Gaps = 4/183 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF+S GL E+LR + + GF P+ IQ ++ ++ RD++A A++G+GKT + I
Sbjct: 436 TFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFI 495
Query: 419 TLDTTLRETQ----VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
L +++ VLIL+PTRELATQIQ L G + C GG G +++L+
Sbjct: 496 LLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELE 555
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
G +V TPGR+ D++ +++ + + +LVLDEAD ML+ GF+ QI + +PP Q
Sbjct: 556 RGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQT 615
Query: 767 CAY 775
Y
Sbjct: 616 LMY 618
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 127 bits (307), Expect = 3e-28
Identities = 66/187 (35%), Positives = 109/187 (58%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F + + ++LR + G+ +P+ +QQ I ++ +D++ ++Q+G+GKTA+F I + +
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL 63
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 601
+ + Q LIL+PTRELA Q+++ I +G F ++ A G ++ + +L H+
Sbjct: 64 ANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHI 123
Query: 602 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYIS 781
V GTPGRV D I + L + LV+DEADEMLN GF EQ+ + ++L P + S
Sbjct: 124 VVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHL-PTERTTMLFS 182
Query: 782 NTTP*DI 802
T P DI
Sbjct: 183 ATLPQDI 189
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 127 bits (306), Expect = 4e-28
Identities = 67/180 (37%), Positives = 109/180 (60%), Gaps = 5/180 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F S+GL D LLR + ++ P+ +Q ++I ++ G+DV+A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 419 TL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL 583
L + +VL+L PTRELA Q+ + +A G ++++ A GG ++ + KL
Sbjct: 62 RLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMKL 121
Query: 584 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
G V+ TPGR+ D+ R+ ++ ++ LVLDEAD ML+ GF ++ V+ LP Q
Sbjct: 122 RKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPAQRQ 181
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 127 bits (306), Expect = 4e-28
Identities = 67/191 (35%), Positives = 106/191 (55%), Gaps = 3/191 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 415
TF +G+R + ++ I G KP+ IQ+++I ++K D I AQ+GTGKTA F + +L
Sbjct: 3 TFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLPVL 62
Query: 416 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN--VQCHACIGGTNLGEDIRKLDY 589
+D Q LILSPTREL QI+K + +++ + A GG + + L
Sbjct: 63 HHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDRQMNNLKR 122
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
H+V TPGR+ D+I R + +K ++LDEADEML+ GFK+ + + ++ + +
Sbjct: 123 TTHIVIATPGRLIDLIERGAVDISHVKTVILDEADEMLSMGFKQDLNRILKFTTKSDRKT 182
Query: 770 AYISNTTP*DI 802
S T P +I
Sbjct: 183 WLFSATMPDEI 193
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 127 bits (306), Expect = 4e-28
Identities = 66/191 (34%), Positives = 115/191 (60%), Gaps = 2/191 (1%)
Frame = +2
Query: 209 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTG 385
D + + + TF+ +GL+ ELL+G+Y G+ KPS IQ+ ++ I++ ++IAQ+QSGTG
Sbjct: 61 DPNSPLYSVKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTG 120
Query: 386 KTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLG 565
KTA F++ +L +D ++ Q + +SPT+ELA Q +VI +G F N++ I +
Sbjct: 121 KTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIKPLLYISEIEVP 180
Query: 566 EDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLN-KGFKEQIYDVYR 742
+++ V+ GTPG++ + + ++ L + +KM+VLDEAD ++ K QI + R
Sbjct: 181 KNVT-----NQVIIGTPGKILENVIKKQLSVKFLKMVVLDEADFIVKMKNVPNQIAMINR 235
Query: 743 YLPPATQGCAY 775
LP + C +
Sbjct: 236 LLPSNVKVCLF 246
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 126 bits (305), Expect = 5e-28
Identities = 74/200 (37%), Positives = 109/200 (54%), Gaps = 5/200 (2%)
Frame = +2
Query: 218 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 397
E ++ +F GL + + R + + P+ IQ ++I + GRDV+ AQ+GTGKTA+
Sbjct: 10 ERTHLLTSFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTAS 69
Query: 398 FSISILQTL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 562
F++ IL L + T+VL+LSPTREL+ QI A G + + IGG +
Sbjct: 70 FALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPM 129
Query: 563 GEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYR 742
G +R L G V+ TPGR+ D+++ L+ S++ LVLDEAD ML+ GF I +
Sbjct: 130 GRQVRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKIVA 189
Query: 743 YLPPATQGCAYISNTTP*DI 802
LP Q + S T P DI
Sbjct: 190 KLPIKRQ-TLFFSATMPKDI 208
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 126 bits (304), Expect = 7e-28
Identities = 72/175 (41%), Positives = 105/175 (60%), Gaps = 1/175 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F ++ L ELL + GFE + IQQ SI ++ G+D+I QA++G+GKTA FS+ IL
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNK 108
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 598
++ Q LIL PTRELA+Q+ I LG + ++ A GG + E L+ G
Sbjct: 109 INLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQADALENGVQ 168
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
+V GTPGR+ D + R + ++K +VLDEAD+ML+ GF ++I V R LP + Q
Sbjct: 169 IVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLDMGFADEIKTVMRDLPGSRQ 223
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 126 bits (304), Expect = 7e-28
Identities = 73/186 (39%), Positives = 102/186 (54%), Gaps = 2/186 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
+ M L E+ + + +PS IQ I ++GRDV+ QA++GTGKTA F I I++
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 422 LD--TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
L+ R Q LIL+PTRELA Q++ I L + A GG L + KL
Sbjct: 66 LEHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAP 125
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
H+V GTPGRV D++ RR L+ ++ +VLDEAD ML+ GF+ I + R P Q
Sbjct: 126 HIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEERQ-TLL 184
Query: 776 ISNTTP 793
+S T P
Sbjct: 185 LSATVP 190
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 126 bits (304), Expect = 7e-28
Identities = 70/173 (40%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF+ +GL L+ GF+ PS IQ +I I+KGRD+IA A++G+GKTA+F+I IL
Sbjct: 5 TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
L +IL+PTRELA QI + A+G MNV C IGG + LD H
Sbjct: 65 QLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRPH 124
Query: 599 VVSGTPGRVFDMIRRRV-LRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 754
++ TPGR+ + + + + K LVLDEAD +L + F+ +I + +LPP
Sbjct: 125 IIVATPGRLASHLNNGLKIALKFCKFLVLDEADRLLGEDFELEIASILEHLPP 177
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 126 bits (303), Expect = 9e-28
Identities = 66/186 (35%), Positives = 110/186 (59%), Gaps = 1/186 (0%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF + L D++L + F + + IQ R+I ++G+++ ++ +GTGKTA+F + IL+
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILE 61
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNVQCHACIGGTNLGEDIRKLDYGQ 595
++ R Q +I++PTRELA QI I G N+ IGG ++ + I++L Q
Sbjct: 62 KIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDSQ 121
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
+V GTPGRV D + R+ L+ ++ ++LDEADEML GFK +I ++ + P Q +
Sbjct: 122 -IVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLKMGFKNEIDALFERVSPDVQIGLF 180
Query: 776 ISNTTP 793
+ T+P
Sbjct: 181 SATTSP 186
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 126 bits (303), Expect = 9e-28
Identities = 65/175 (37%), Positives = 99/175 (56%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F L+ +L+ + GF +P+ IQ+++I ++ G D+I QAQ+GTGKTA F + +L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLN 115
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
+D + + Q L+L+PTRELA Q+ + GG++ + L G
Sbjct: 116 NIDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGLRRGAR 175
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
VV GTPGR+ D+IR+ L+ +K LVLDEADEML+ GF + I + P Q
Sbjct: 176 VVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKDRQ 230
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 126 bits (303), Expect = 9e-28
Identities = 72/196 (36%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Frame = +2
Query: 215 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 394
+EDV P F +GL + ++R I G+E P+ IQ ++I ++KG DV+ AQ+GTGKTA
Sbjct: 284 AEDVSDRPRFADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTA 343
Query: 395 TFSISILQTLDTT---LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLG 565
+F++ +LQ L + R + LIL PTRELA Q+ + G ++ + IGG ++
Sbjct: 344 SFTLPMLQKLAGSRARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHALLIGGESMA 403
Query: 566 EDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRY 745
E L+ G V+ TPGR+ D+ R L LV+DEAD ML+ GF I +
Sbjct: 404 EQRDVLNRGVDVLIATPGRLLDLFGRGGLLLTQTSTLVIDEADRMLDMGFIPDIEKIVAL 463
Query: 746 LPPATQGCAYISNTTP 793
LP Q + + P
Sbjct: 464 LPAHRQTLFFSATMAP 479
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 126 bits (303), Expect = 9e-28
Identities = 64/163 (39%), Positives = 101/163 (61%), Gaps = 1/163 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F S+ L ++L++ + + G+E+ + IQ+ S+ I+ G+D+IAQA++GTGKTA F + +L
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 598
L QVLIL PTREL Q+ K I L M N++ + GG ++ + +G H
Sbjct: 66 LVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKSVAHGAH 125
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQI 727
+V GTPGR+ + + L ++ LVLDEAD ML+ GF+++I
Sbjct: 126 IVVGTPGRILKHLNKSSLSLDHVRTLVLDEADRMLDMGFQDEI 168
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 126 bits (303), Expect = 9e-28
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 5/197 (2%)
Frame = +2
Query: 218 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 397
++ V+ F ++GL + LLR I +E P+ IQ RSI +++G D++ AQ+GTGKTA
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110
Query: 398 FSISILQTLDTTL-----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 562
F + IL + R + L+L+PTRELATQI G F IGG
Sbjct: 111 FVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKP 170
Query: 563 GEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYR 742
G R+++ G ++ TPGR+ D + V+R +++ +VLDEAD+ML+ GF I +
Sbjct: 171 GPQARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMA 230
Query: 743 YLPPATQGCAYISNTTP 793
LP Q + S T P
Sbjct: 231 KLPRQRQAVMF-SATMP 246
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 126 bits (303), Expect = 9e-28
Identities = 62/183 (33%), Positives = 109/183 (59%), Gaps = 4/183 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F S+GL + + + G++ PS IQ ++I ++ G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 419 TLDTTLR----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
L + + + L+L+PTRELA Q+ + + G ++ ++ GG + I+KL
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLR 121
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
+G V+ TPGR+ D+ +++ ++ +++LVLDEAD ML+ GF I + LP Q
Sbjct: 122 HGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQN 181
Query: 767 CAY 775
+
Sbjct: 182 LMF 184
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 126 bits (303), Expect = 9e-28
Identities = 67/183 (36%), Positives = 104/183 (56%), Gaps = 4/183 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F++ GL +ELLR +Y+ GF PS IQ +S ++ RD++A A++G+GKT + I
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 419 TLDTTLRETQ----VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
L +++ +L+LSPTRELATQIQ L G + C GG G +++++
Sbjct: 222 HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIE 281
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
G +V TPGR+ D++ + + + LVLDEAD ML+ GF+ QI + +P Q
Sbjct: 282 RGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQT 341
Query: 767 CAY 775
Y
Sbjct: 342 LMY 344
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 126 bits (303), Expect = 9e-28
Identities = 71/186 (38%), Positives = 101/186 (54%), Gaps = 1/186 (0%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF + + +LR I G+E P+AIQ +I ++ G DV+ AQ+GTGKTA F+I +L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDYGQ 595
+D T + Q L+L PTRELA Q+ + G +++ + GG++ + L G
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
VV GTPGR+ D + R L + LVLDEADEML GF + + + P Q A
Sbjct: 134 QVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQ-VAL 192
Query: 776 ISNTTP 793
S T P
Sbjct: 193 FSATMP 198
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 125 bits (302), Expect = 1e-27
Identities = 69/149 (46%), Positives = 97/149 (65%), Gaps = 1/149 (0%)
Frame = +2
Query: 350 RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMN 526
+D+I QA+SGTGKT FS+ L+ +D T TQVLIL+PTRE+A QIQ I A+G +
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEG 63
Query: 527 VQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLN 706
++ H IGGT G D +KL H+ GTPGR+ +I VL+T +I++ VLDEAD++L+
Sbjct: 64 LRSHVFIGGTLFGPDRQKLK-KCHIAVGTPGRIKQLIEYEVLKTGTIRLFVLDEADKLLD 122
Query: 707 KGFKEQIYDVYRYLPPATQGCAYISNTTP 793
F+EQ+ +Y +L Q A +S T P
Sbjct: 123 DTFQEQVNWIYNHLSDNKQMLA-LSATYP 150
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 125 bits (302), Expect = 1e-27
Identities = 65/188 (34%), Positives = 107/188 (56%), Gaps = 3/188 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--DVIAQAQSGTGKTATFSISI 412
TF+ +G+ E+ + I G+E P +Q+ ++P + G DV+A AQ+GTGKTA F + +
Sbjct: 3 TFEELGVSPEIRKAIEEMGYENPMPVQEE-VIPYLLGENNDVVALAQTGTGKTAAFGLPL 61
Query: 413 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDY 589
LQ +D R Q LIL PTREL QI + +++ ++ GG+++ IR L
Sbjct: 62 LQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKR 121
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
G H++ TPGR+ D++ R+ + ++ +V+DEADEMLN GF + I + +P
Sbjct: 122 GVHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLNMGFTDSINAILADVPKERNTL 181
Query: 770 AYISNTTP 793
+ + +P
Sbjct: 182 LFSATMSP 189
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 125 bits (301), Expect = 2e-27
Identities = 65/185 (35%), Positives = 102/185 (55%), Gaps = 1/185 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F + L +L + GF P+ IQ +I +++GRD + +AQ+GTGKTA FS+ +L
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDYGQH 598
L+ + + Q ++++PTRELA Q+ I LG + ++ GG ++ + +R L G H
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
+V GTPGRV D+I R L +LDEADEML GF + + + P + Q +
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207
Query: 779 SNTTP 793
+ P
Sbjct: 208 ATMPP 212
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 125 bits (301), Expect = 2e-27
Identities = 68/184 (36%), Positives = 100/184 (54%), Gaps = 1/184 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F + L E+ I GFE+ S IQ +I I+KG+D+I AQ+GTGKTA F+I ++
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 598
L+ + Q LIL PTREL Q+ + L + N + GG + +R L
Sbjct: 71 LEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRALRKNPQ 130
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
+V TPGR+ D +RR + IK++VLDEADEML+ GF+E + + + P Q +
Sbjct: 131 IVIATPGRMMDHMRRGSIHLDEIKIVVLDEADEMLDMGFREDMEFILKDTPADRQTIMFS 190
Query: 779 SNTT 790
+ T
Sbjct: 191 ATMT 194
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 125 bits (301), Expect = 2e-27
Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 3/193 (1%)
Frame = +2
Query: 224 VEVIP---TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 394
VE+ P F +GL D L + G+ +P+ IQ +++ ++ GRDV AQ+GTGKTA
Sbjct: 126 VEIPPQDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTA 185
Query: 395 TFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 574
F++ IL L R + L+L PTRELA Q+++ + ++ GG G+
Sbjct: 186 AFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQR 245
Query: 575 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 754
L G VV+ TPGR+ D I + + +++LVLDE D ML+ GF + + + P
Sbjct: 246 EDLQRGVDVVAATPGRLLDHIEQGTMTLADVEILVLDEVDRMLDMGFLPDVKRIVQQCPQ 305
Query: 755 ATQGCAYISNTTP 793
A Q + S T P
Sbjct: 306 ARQ-TLFFSATLP 317
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 125 bits (301), Expect = 2e-27
Identities = 63/187 (33%), Positives = 106/187 (56%), Gaps = 1/187 (0%)
Frame = +2
Query: 233 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 412
+ T + + + + + + G + S IQ +S+ ++G+DVI QAQ+G+GKT F I
Sbjct: 3 VETVKQLDINPAITKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPA 62
Query: 413 LQTLDTTLRETQVLILSPTRELATQI-QKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
L+ ++ TQ ++L PTRELA Q+ Q+ A D N++ GG +G I+ L +
Sbjct: 63 LEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKH 122
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
H++ GTPGRV D + +R + R++K+ VLDEAD ML+ GF++ + ++ P Q
Sbjct: 123 SPHIIVGTPGRVMDHVEKRRIDLRNVKLRVLDEADRMLDMGFEDDLRIIFGQTPKQVQTL 182
Query: 770 AYISNTT 790
+ + T
Sbjct: 183 LFSATFT 189
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 125 bits (301), Expect = 2e-27
Identities = 69/163 (42%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Frame = +2
Query: 230 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 409
V PTF S+GL EL + T G++ P+AIQ + ++GRD+IA A++G+GKTA F +
Sbjct: 49 VSPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLP 108
Query: 410 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
ILQ L + LIL+PTREL QI + ILA+G + V +GG + L
Sbjct: 109 ILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAK 168
Query: 590 GQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGF 715
HVV G+PGRV D +++ + +S+K+LVLDEAD +L+ F
Sbjct: 169 KPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDF 211
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 124 bits (300), Expect = 2e-27
Identities = 67/186 (36%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F SMGL ++RGI G++ P+ IQ+++I + GRDV+A A++G+GKTA F I + +
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 422 LDTTLRET--QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
L T +T + LILSPTRELA Q Q+ I +G F ++ +GG ++ +
Sbjct: 100 LKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDSMDNQFSAIHGNP 159
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
++ TPGR + + +SI+ ++ DEAD + GF EQI+++ LP Q +
Sbjct: 160 DIIVATPGRFLHICIEMDMNLKSIEFVIFDEADRLFEMGFGEQIHEIANRLPKNRQTLLF 219
Query: 776 ISNTTP 793
S T P
Sbjct: 220 -SATLP 224
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 124 bits (300), Expect = 2e-27
Identities = 66/189 (34%), Positives = 112/189 (59%), Gaps = 5/189 (2%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF---SISI 412
F +GL +L+ + G+ P+ IQ+++I P+++GRD++ AQ+GTGKTA F SI
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 413 LQTLDTTL--RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
L+ D + + ++L+L+PTREL +QI G ++ + +GGT++ +D KL
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRNKLH 123
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
G ++ TPGR+ D+I ++ S+++LVLDEAD+ML+ GF + + + +P Q
Sbjct: 124 RGTDILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLDLGFVHALRRISQLVPKERQ- 182
Query: 767 CAYISNTTP 793
+ S T P
Sbjct: 183 TLFFSATMP 191
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 124 bits (300), Expect = 2e-27
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 3/188 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF+++GL E+LR + G P+ IQ++SI ++ GRD++ AQ+GTGKT F + +L
Sbjct: 2 TFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLH 61
Query: 419 TLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
+ R + L+LSPTRELATQI + +++ +GG + R L
Sbjct: 62 KIAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNLKR 121
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
+V TPGR+ D +RR L + ++++DEAD ML+ GF I + R LP Q
Sbjct: 122 NWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKGRQSL 181
Query: 770 AYISNTTP 793
+ + P
Sbjct: 182 LFSATCPP 189
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 124 bits (300), Expect = 2e-27
Identities = 71/186 (38%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F SMGL EL++GI G++ P+ IQ+++I I++GRDV+A A++G+GKTA F I + +
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 422 LDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
L + + LILSPTRELA Q K I LG FM ++ +GG ++ +
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCP 160
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
V+ TPGR + L+ SI+ +V DEAD + GF EQ+ + LP + Q +
Sbjct: 161 DVIVATPGRFLHLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMF 220
Query: 776 ISNTTP 793
S T P
Sbjct: 221 -SATLP 225
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 124 bits (300), Expect = 2e-27
Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 6/187 (3%)
Frame = +2
Query: 251 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL-- 424
+G+ E+++ + + G EK IQ+ + P ++GRD+I +A++GTGKT F I I+ +
Sbjct: 109 LGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 168
Query: 425 ----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 592
R L+L+PTRELA Q++K ++ C GGT +G+ +R+LDYG
Sbjct: 169 YNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRQLDYG 226
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCA 772
V GTPGRV D+++R L ++ +VLDEAD+ML GF E + + LP Q
Sbjct: 227 VDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMM 286
Query: 773 YISNTTP 793
+ S T P
Sbjct: 287 F-SATMP 292
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 124 bits (300), Expect = 2e-27
Identities = 71/186 (38%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F SMGL LLR I+ GF+ P+ IQ+++I +++GRDV+ A++G+GKTA F I +++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 422 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
L +TL T+ LILSP RELA Q KV+ +++ A +GG +L E L
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKP 190
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
+V TPGR + L SI+ +V DEAD + GF Q+ ++ LP + Q +
Sbjct: 191 DIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLLF 250
Query: 776 ISNTTP 793
S T P
Sbjct: 251 -SATLP 255
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 124 bits (299), Expect = 3e-27
Identities = 65/188 (34%), Positives = 106/188 (56%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F + L E+ R + G+E P+ +Q I ++ +D++ ++Q+G+GKTA+F I + +
Sbjct: 5 SFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE 64
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
++ + Q L+L+PTRELA Q+++ I +G F ++ A G + +L H
Sbjct: 65 MVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTH 124
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
+V GTPGRV D I + L +K LV+DEADEMLN GF +Q+ + LP +
Sbjct: 125 IVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLF- 183
Query: 779 SNTTP*DI 802
S T P D+
Sbjct: 184 SATLPEDV 191
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 124 bits (299), Expect = 3e-27
Identities = 65/179 (36%), Positives = 106/179 (59%), Gaps = 4/179 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F+++GLRDEL+ I T G+ + IQ+ +I ++ D++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQ 61
Query: 419 TL----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
L T ++ + LI++PTRELA Q+ + +N++ A GG + I +L
Sbjct: 62 RLAAKQSTKVQGVRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGGVRIEPQIAQLQ 121
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
G V+ TPGR+ D+ +R L ++++LV DEAD ML+ GF + + + LP Q
Sbjct: 122 EGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDDVKRIQSLLPVKRQ 180
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 124 bits (299), Expect = 3e-27
Identities = 66/170 (38%), Positives = 104/170 (61%), Gaps = 3/170 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILP--IVKGRDVIAQAQSGTGKTATFSISIL 415
F+ GL +E+L I G+EKP+ IQ + +LP + +D+IAQAQ+GTGKTA F I +L
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQ-KIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLL 78
Query: 416 QTLDTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 592
+ +D + + +I++PTRELA QI + + +L V+ GG +L + + L+ G
Sbjct: 79 ERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDLEKG 138
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYR 742
+V GTPGR+ D + R L ++ LVLDEAD ML+ GF + + ++ +
Sbjct: 139 VDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVLEIIK 188
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 124 bits (298), Expect = 4e-27
Identities = 69/194 (35%), Positives = 112/194 (57%), Gaps = 5/194 (2%)
Frame = +2
Query: 227 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 406
E +F ++GL L++ + G+ KP+ IQ ++I +++G+D+ AQ+GTGKTA F++
Sbjct: 3 ETSVSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFAL 62
Query: 407 SILQTLDTT-----LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGED 571
+ L T R ++LILSPTRELA+QI + + + +A GG +G
Sbjct: 63 PSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQ 122
Query: 572 IRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 751
+R LD G ++ TPGR+ D+I +R L + +++ VLDEAD+ML+ GF + + + LP
Sbjct: 123 MRMLDRGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLLP 182
Query: 752 PATQGCAYISNTTP 793
Q + S T P
Sbjct: 183 KNRQ-TLFFSATMP 195
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 123 bits (297), Expect = 5e-27
Identities = 64/186 (34%), Positives = 106/186 (56%), Gaps = 1/186 (0%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F+S ++ G+ G+++P+ IQ ++I PI+ G DVI AQ+GTGKTA +++ I+Q
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 419 TLDTTLR-ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
+ +T R + L+++PTRELA QI +LG ++ + GG N+ + IR+L G
Sbjct: 62 KMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGV 121
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
VV PGR+ D I R + ++ L++DEAD M + GF+ I + + L Q +
Sbjct: 122 DVVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQTLLF 181
Query: 776 ISNTTP 793
+ P
Sbjct: 182 SATMPP 187
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 123 bits (296), Expect = 6e-27
Identities = 62/170 (36%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 415
+F+ +GL ++ L + GF P+ IQ +I ++ G ++IA+A++GTGKTA F + ++
Sbjct: 47 SFEELGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGKTAAFGLPLI 106
Query: 416 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
Q L + L+L PTRELA Q+ + +L + H GG ++ E +R L+ G
Sbjct: 107 QELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIAEQLRNLEQGG 166
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRY 745
++ GT GRV D I R L ++ +LDEADEMLN GF E I ++ +
Sbjct: 167 EIIVGTTGRVIDHIERGSLELSYLRYFILDEADEMLNMGFVEDIESIFSH 216
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 123 bits (296), Expect = 6e-27
Identities = 71/188 (37%), Positives = 103/188 (54%), Gaps = 6/188 (3%)
Frame = +2
Query: 248 SMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLD 427
S L LR I G+ P+AIQ ++I I+ GRDV+ AQ+G+GKTA F++ +LQ L
Sbjct: 9 SPALLPAFLRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLA 68
Query: 428 T----TLRETQVLILSPTRELATQIQKVILALGDFM--NVQCHACIGGTNLGEDIRKLDY 589
T R T+ LIL PTRELA Q+ + I ++ V+ GG ++ + L
Sbjct: 69 NAPTGTPRPTRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSINPQMMNLRG 128
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
G +V TPGR+ D++ L+ + LVLDEAD +L+ GF E++ + LPP Q
Sbjct: 129 GADIVVATPGRLLDLLEHNALKISEVSTLVLDEADRLLDLGFGEELGRILELLPPRRQN- 187
Query: 770 AYISNTTP 793
+ S T P
Sbjct: 188 LFFSATFP 195
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 123 bits (296), Expect = 6e-27
Identities = 65/178 (36%), Positives = 100/178 (56%), Gaps = 1/178 (0%)
Frame = +2
Query: 263 DELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRE 442
+ LL + T GF + IQQ+SI PI+KG+D++AQ+++G+GKT F I + D +
Sbjct: 12 EALLGTLETLGFTTMTEIQQKSIGPILKGKDILAQSKTGSGKTLAFGIPAVMGTDVKSNK 71
Query: 443 TQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPG 619
Q ++++PTRELA Q+ + + + N++ GG L L G H++ GTPG
Sbjct: 72 PQTIVITPTRELAEQVAMELRKIAAYKANLKILTLYGGVPLRAQADSLAKGAHILIGTPG 131
Query: 620 RVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYISNTTP 793
R+ D + + L SIK LVLDEAD ML+ GF E+I + +P Q + + P
Sbjct: 132 RIQDHLAKGTLTLESIKTLVLDEADRMLDMGFYEEIIKIGSNMPKQKQTLLFSATFPP 189
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 123 bits (296), Expect = 6e-27
Identities = 70/220 (31%), Positives = 120/220 (54%), Gaps = 1/220 (0%)
Frame = +2
Query: 134 IRKMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSA 313
+ ++++ E S +K S S+ +S + +F L ELL I + + +P+
Sbjct: 64 VSELSNKEDLSTKKDQSSASSSSSTSSSSSPPSVQSFTEFDLVPELLESIQSLKYTQPTP 123
Query: 314 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQ 493
IQ +I ++G+D++ A++G+GKTA F+I ILQTL T + L+L+PTRELA QI+
Sbjct: 124 IQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQTLYTAAQPYYALVLAPTRELAFQIK 183
Query: 494 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIK 670
+ ALG M ++ IGG ++ E R L HV+ TPGR+ D + + + ++
Sbjct: 184 ETFDALGSSMGLRSVCIIGGMSMMEQARDLMRKPHVIIATPGRLIDHLEHTKGFSLKKLQ 243
Query: 671 MLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYISNTT 790
LV+DE D M++ + + I + + + P+ Q Y+ T
Sbjct: 244 YLVMDEVDRMIDLDYAKAIDQILKQI-PSHQRITYLYTAT 282
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 122 bits (295), Expect = 8e-27
Identities = 63/173 (36%), Positives = 103/173 (59%), Gaps = 2/173 (1%)
Frame = +2
Query: 230 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 409
+I +FD +GL L+ G+ G KP+ IQ ++I ++ +DVI Q+ +G+GKT + +
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLP 60
Query: 410 ILQTLDTTLRETQVLILSPTRELATQIQKVI--LALGDFMNVQCHACIGGTNLGEDIRKL 583
I Q +DT+ RE Q +IL+PT ELA QI K I L+ ++V IG N+ I KL
Sbjct: 61 IFQKIDTSKREMQAIILAPTHELAMQINKEIQLLSGNSKVSVTSTPIIGNANVKRQIEKL 120
Query: 584 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYR 742
HV+ G+ GR+ ++I+++ + +IK +V+DE D++L+ I DV +
Sbjct: 121 KEKPHVIVGSSGRILELIKKKKISAHTIKTIVVDEGDKLLDHSNLSSIKDVIK 173
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 122 bits (295), Expect = 8e-27
Identities = 73/188 (38%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
Frame = +2
Query: 233 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 412
+ TF+ M L D L + + F P+ +Q+++I P + GRD++A AQ+GTGKT F I
Sbjct: 26 LTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPA 85
Query: 413 LQTL-DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
L+ L DT QVLIL PTRELA Q+ V L +GGT+ I+ +
Sbjct: 86 LEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQLKGKKLKSAALVMGGTSERNQIQSIRS 145
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
G VV TPGR+ D + RR++ ++MLVLDEAD M++ GF I + R LP Q
Sbjct: 146 GARVVVATPGRLEDYMGRRLVDLSQVEMLVLDEADRMMDMGFLPAIKRILRALPRDKQTL 205
Query: 770 AYISNTTP 793
+ + P
Sbjct: 206 CFSATMGP 213
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 122 bits (295), Expect = 8e-27
Identities = 72/186 (38%), Positives = 101/186 (54%), Gaps = 1/186 (0%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+FDS ++ GI G+ P+ IQ++ I + GRDVI AQ+GTGKTA F + ILQ
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 419 TLDTTLR-ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
L R + +I++PTRELA QIQ VI ALG + ++ GG I++L G
Sbjct: 62 RLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGV 121
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
+ PGR+ D + R L + ML+LDEAD+M + GF + + R L PA +
Sbjct: 122 EIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILR-LAPAQRQTML 180
Query: 776 ISNTTP 793
S T P
Sbjct: 181 FSATMP 186
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 122 bits (294), Expect = 1e-26
Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 5/190 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TFD GL + L R + P+ IQ+R+I + GRD++ AQ+GTGKTA F++ +L
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 419 TLDT-----TLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL 583
L T T R T+ LILSPTRELA QI + I L + + GG ++ I+ L
Sbjct: 65 HLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQAL 124
Query: 584 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
G ++ TPGR+ D++ +R + R + L+LDEAD ML+ GF + + P Q
Sbjct: 125 ARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCPDDRQ 184
Query: 764 GCAYISNTTP 793
+ S T P
Sbjct: 185 SMMF-SATMP 193
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 122 bits (294), Expect = 1e-26
Identities = 70/186 (37%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F S L LL I GF P+ IQ+++I P+++G DV+A A++G+GKTA F I +L T
Sbjct: 24 FQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPMLNT 83
Query: 422 LDTTLRETQV--LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
L + + L+LSPTREL+ QI + AL F++++ A +GG ++ + L
Sbjct: 84 LKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFELLASNP 143
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
VV TPGR+ ++ L S++ LVLDEAD + G + QI + + LP + Q A
Sbjct: 144 DVVVATPGRLLHIMEEASLHLTSVRCLVLDEADRLFELGLQPQIGAIMQKLPESCQR-AL 202
Query: 776 ISNTTP 793
S T P
Sbjct: 203 FSATMP 208
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 122 bits (293), Expect = 1e-26
Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 1/188 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F +GL L+RG+ G+ P+ +Q R+I ++ GRD++A AQ+GTGKTA F++ +L
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLAR 62
Query: 422 LDTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
L +VL+L PTREL Q++ G F +V+ GG G+ L G
Sbjct: 63 LGGHRPGGPRVLVLEPTRELGAQVETAFRDFGRFTDVRSTIIHGGVGYGKQRSDLRAGTD 122
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
+V T GR+ D I+ + +R S+++L+LDE D ML+ GF + + P Q +
Sbjct: 123 IVIATVGRLMDFIKEKEIRLDSVEVLILDEVDRMLDMGFINDVKRIVGLCPKQRQ-TLFF 181
Query: 779 SNTTP*DI 802
S T P +I
Sbjct: 182 SATIPPEI 189
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 122 bits (293), Expect = 1e-26
Identities = 67/187 (35%), Positives = 104/187 (55%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F+ LR+EL+ I G+ +P+ +Q +I + G D++ ++++G+GKTA + I I+
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 601
+ + LIL PTRELA Q+ KV ALG ++ GG ++ + I + G ++
Sbjct: 64 TAKE-KGIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGANI 122
Query: 602 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYIS 781
+ GTPGR D+I R +L + VLDEADEML+ GF E I + LP Q + S
Sbjct: 123 IVGTPGRTLDLIDRGILNFDKVSYFVLDEADEMLDMGFIEDIKKIINVLPVERQSFLF-S 181
Query: 782 NTTP*DI 802
T P +I
Sbjct: 182 ATIPSEI 188
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 121 bits (292), Expect = 2e-26
Identities = 64/185 (34%), Positives = 111/185 (60%), Gaps = 6/185 (3%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F ++GL +L+ + + P IQ+++I I+KG+D++ AQ+G+GKTA+F + ILQ
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQ 69
Query: 419 TLDTTL----RETQVLILSPTRELATQIQKVILALGDFM--NVQCHACIGGTNLGEDIRK 580
L T R L+L PTRELA Q+ +V A + + ++ A GG ++ + +
Sbjct: 70 MLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQMIQ 129
Query: 581 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 760
L G ++ TPGR+ D++ + + +++LVLDEAD+MLN GFKE++ ++++ LP
Sbjct: 130 LQ-GVEILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKMLNLGFKEEMANIFKLLPQKR 188
Query: 761 QGCAY 775
Q +
Sbjct: 189 QNLLF 193
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 121 bits (292), Expect = 2e-26
Identities = 62/176 (35%), Positives = 100/176 (56%), Gaps = 2/176 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F + L +L + F +P+ IQ +I P + G+D++A AQ+GTGKT F + +Q
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 422 LDTTLRETQV--LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
L T R+ V LIL+PTRELA QI + +L + ++ +GG N +R + G
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGA 123
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
++V TPGR++D + R ++ +++ML+LDE+D ML+ GF I + +P Q
Sbjct: 124 NIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQ 179
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 121 bits (292), Expect = 2e-26
Identities = 60/173 (34%), Positives = 104/173 (60%), Gaps = 2/173 (1%)
Frame = +2
Query: 230 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 409
++ +FD + + ++ G+ G + P+AIQ+ +I +K +D+I Q+Q+G+GKT + +
Sbjct: 1 MVTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLP 60
Query: 410 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGD--FMNVQCHACIGGTNLGEDIRKL 583
I Q +D++ RETQ LIL+PT EL QI K I L + + IG N+ I KL
Sbjct: 61 IFQKIDSSKRETQALILAPTHELVMQIDKQIKTLSSNAGLTINSTVMIGEVNIVRQIEKL 120
Query: 584 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYR 742
H++ G+ GRV ++I+R+ + + +IK +V+DEAD +L++ + DV +
Sbjct: 121 KEKPHIIVGSTGRVLELIKRKKISSHTIKTIVIDEADMLLDQNNLAGVKDVIK 173
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 121 bits (292), Expect = 2e-26
Identities = 67/177 (37%), Positives = 106/177 (59%)
Frame = +2
Query: 179 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 358
L +S V D + + V F MGL DELL+ IY GFEKPS IQ+ +I I++G +V
Sbjct: 32 LDGSISGVGTDRGQKLLVAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRGHNV 91
Query: 359 IAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 538
+ Q++SGTGKT ++ +L R TQV++++PTREL+TQ+ +VI L + ++
Sbjct: 92 VVQSKSGTGKTIAYTCGVLGNTKIGER-TQVMVVTPTRELSTQVTEVISGLAGPLGIKVF 150
Query: 539 ACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNK 709
+ + + + I G+ VV G+PG + ++ L + +KM+VLDEAD +L+K
Sbjct: 151 SAL-KNKITDSI-----GEEVVVGSPGTILKLMELGKLNYKGVKMIVLDEADILLDK 201
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 121 bits (292), Expect = 2e-26
Identities = 77/191 (40%), Positives = 108/191 (56%), Gaps = 6/191 (3%)
Frame = +2
Query: 209 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG---RDVIAQAQSG 379
DT + I +F +GL ++ G+ F+KPS IQ R+ LP++ R++IAQ+QSG
Sbjct: 87 DTDSPLSSISSFSELGLPQGIIDGLLAMNFKKPSKIQARA-LPLMLSNPPRNMIAQSQSG 145
Query: 380 TGKTATFSISILQTLDTTL-RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 556
TGKT F ++IL +D + Q L L+P+RELA QIQ VI ++G F C +
Sbjct: 146 TGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQF----CTGLVVDA 201
Query: 557 NL-GEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLN-KGFKEQIY 730
+ G R+ +VV GTPG V D+IRRR +K+LV+DEAD ML+ +G EQ
Sbjct: 202 AIPGAISRETGVKANVVVGTPGTVMDLIRRRQFDVSQLKLLVVDEADNMLDQQGLGEQCV 261
Query: 731 DVYRYLPPATQ 763
V LP Q
Sbjct: 262 RVKNMLPKTIQ 272
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 121 bits (291), Expect = 3e-26
Identities = 71/193 (36%), Positives = 109/193 (56%), Gaps = 3/193 (1%)
Frame = +2
Query: 233 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 412
+ F +G+ + + G + + IQ+++I I+ G+D+I QA++GTGKT F + I
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 413 LQTLDTTLRETQVLILSPTRELATQIQ---KVILALGDFMNVQCHACIGGTNLGEDIRKL 583
L+ +D + Q LI++PTRELA QI K +L + +NV A GG ++ + +RKL
Sbjct: 64 LEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVL--AIYGGQDVAQQLRKL 121
Query: 584 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
H+V TPGR+ D IRR + ++ +VLDEAD+ML GF I D+ P + Q
Sbjct: 122 KGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQ 181
Query: 764 GCAYISNTTP*DI 802
+ S T P DI
Sbjct: 182 TMLF-SATIPKDI 193
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 121 bits (291), Expect = 3e-26
Identities = 65/193 (33%), Positives = 104/193 (53%), Gaps = 8/193 (4%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TFD GL E+L+ I G+ P+ IQ ++I ++ GRDV+ AQ+GTGKTA+FS+ I+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 419 TL--------DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 574
L + LIL+PTRELA Q+ + A ++ GG ++ +
Sbjct: 72 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQM 131
Query: 575 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 754
+L G ++ TPGR+ D ++++ +++LVLDEAD ML+ GF + + LP
Sbjct: 132 AELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPK 191
Query: 755 ATQGCAYISNTTP 793
Q + + +P
Sbjct: 192 ERQTLLFSATFSP 204
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 121 bits (291), Expect = 3e-26
Identities = 69/210 (32%), Positives = 117/210 (55%), Gaps = 9/210 (4%)
Frame = +2
Query: 188 DLSNVEFDTSEDVEV----IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD 355
D + T +D+++ + F + GL++ELLR + GFE P+ +Q S+ + G
Sbjct: 53 DFKEEQQPTGKDIQIDNYNVSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQ 112
Query: 356 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 535
+I QA++GTGKTA F +++L T++T + + L+++ TRELA Q + L LG FM
Sbjct: 113 LICQAKAGTGKTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVK 172
Query: 536 HACI--GGTNLGEDIRKLD-YGQHVVSGTPGRVFDMI-RRRVLRTRSIKMLVLDEADEML 703
C GG + +I+ ++ +V GTPGR+ D+I R+ L+ +K +LDEAD M+
Sbjct: 173 VECFYGGGEPVSVNIQTIETVKPQIVVGTPGRLKDLICERKALKVDRLKYFILDEADTMI 232
Query: 704 -NKGFKEQIYDVYRYLPPATQGCAYISNTT 790
+ ++ I D++ P Q A+ + T
Sbjct: 233 EDLNMRKDIQDIFLKSPQEKQFMAFSATFT 262
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 120 bits (290), Expect = 3e-26
Identities = 66/191 (34%), Positives = 109/191 (57%), Gaps = 3/191 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--DVIAQAQSGTGKTATFSISI 412
TF + ++++G+ GF + +Q++ I+PIV R D++ AQ+GTGKTA F I +
Sbjct: 3 TFAEFEINTDIMKGLDGLGFSVMTPVQEK-IIPIVLNRQTDLVGLAQTGTGKTAAFGIPL 61
Query: 413 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDY 589
+Q DT L+ TQ L+L PTREL Q+ + +G ++ ++ GG ++ +L
Sbjct: 62 IQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYVQKLKIVPVYGGASIVSQTEELRK 121
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
G VV TPGR+ D+IRR + + +VLDEADEML GF++++ + + P ++
Sbjct: 122 GAQVVVATPGRLHDLIRRGAVDLSGVSWVVLDEADEMLQMGFQDELNAILA-VTPDSKNT 180
Query: 770 AYISNTTP*DI 802
S T P ++
Sbjct: 181 LLFSATMPREV 191
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 120 bits (290), Expect = 3e-26
Identities = 60/163 (36%), Positives = 97/163 (59%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F S+ L ++R + G+E + IQ++SI +++GRD++ + +G+GKT F I I++
Sbjct: 56 SFASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIE 115
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
+ LI++PTRELA QI + +L M + IGGTN+ D++ L H
Sbjct: 116 HALKNPGQFTALIVTPTRELALQIDQEFKSLSKGMRLHSATFIGGTNINTDMKVLSRKLH 175
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQI 727
V+ GTPGR+ D+ R++L+ +K LVLDE D ML+ GF +
Sbjct: 176 VIVGTPGRLLDLTNRKLLKLNQVKTLVLDEFDRMLDMGFVNDV 218
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 120 bits (290), Expect = 3e-26
Identities = 67/184 (36%), Positives = 108/184 (58%), Gaps = 5/184 (2%)
Frame = +2
Query: 227 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 406
E +PTF+ + L LL+ + GF +P+ IQ ++I + G+D++A A +G+GKTA F +
Sbjct: 187 EELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLL 246
Query: 407 SILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG-TNLGEDI 574
+L+ L D+ R +VLIL PTRELA Q Q V+ L F N+ +GG +N +++
Sbjct: 247 PVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEV 306
Query: 575 RKLDYGQHVVSGTPGRVFD-MIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 751
+L VV TPGR+ D ++ + +++L+LDEAD +L+ GFK++I + P
Sbjct: 307 -ELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCP 365
Query: 752 PATQ 763
Q
Sbjct: 366 TNRQ 369
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 120 bits (290), Expect = 3e-26
Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 1/182 (0%)
Frame = +2
Query: 209 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 388
+T+ED E +F + L EL++ + KP+ IQ ++I P ++G D+I AQ+G+GK
Sbjct: 73 NTNED-ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGK 131
Query: 389 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 568
TA F+I IL L IL+PTRELA QI++ +LG M V+ +GG N+ +
Sbjct: 132 TAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMD 191
Query: 569 DIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRY 745
R L H++ TPGR+ D + + R +K LV+DEAD +L+ F + + +
Sbjct: 192 QARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKI 251
Query: 746 LP 751
+P
Sbjct: 252 IP 253
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 120 bits (290), Expect = 3e-26
Identities = 75/213 (35%), Positives = 114/213 (53%), Gaps = 9/213 (4%)
Frame = +2
Query: 182 SEDLSNVEFDTSEDVEVIPT-------FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI 340
SE S+VE DT E V F SMGL + +GI G++ P+ IQ+++I I
Sbjct: 71 SECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVI 130
Query: 341 VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET--QVLILSPTRELATQIQKVILALG 514
+ G+DV+A A++G+GKTA F + + + L T +T + LILSPTRELA Q K LG
Sbjct: 131 LDGKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELG 190
Query: 515 DFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEAD 694
F ++ +GG + + L ++ TPGR+ + L+ +S++ +V DEAD
Sbjct: 191 KFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDEAD 250
Query: 695 EMLNKGFKEQIYDVYRYLPPATQGCAYISNTTP 793
+ GF EQ+ ++ LP Q + S T P
Sbjct: 251 RLFEMGFAEQLQEIIARLPGGHQTVLF-SATLP 282
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 120 bits (289), Expect = 4e-26
Identities = 60/176 (34%), Positives = 105/176 (59%), Gaps = 2/176 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F +GL +E+L+ + G E+P+ IQ+++I I+KG++VI +A++GTGKT + + I++
Sbjct: 4 FLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPIIEK 63
Query: 422 LDTTLRETQVLILSPTRELATQIQKVI--LALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
+D + E Q +ILSPT EL QI V+ L G + +G N+ + KL
Sbjct: 64 IDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGNIKRQMEKLKNKP 123
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
H++ GT GR+ ++I ++ + T +IK +V+DE D++L+ + + V + P TQ
Sbjct: 124 HILVGTTGRILELINKKKITTNTIKTIVIDEGDKLLDFINIKDVKSVVKSCPRDTQ 179
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 120 bits (289), Expect = 4e-26
Identities = 67/206 (32%), Positives = 115/206 (55%), Gaps = 3/206 (1%)
Frame = +2
Query: 185 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 364
ED + ++ + + + + +GL + + I GF +P+ IQ+++I I+ G+DV+A
Sbjct: 7 EDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
Query: 365 QAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 535
+++G+GKTA F I +LQ L DTT + L++SPTRELA Q KV+ LG F ++C
Sbjct: 67 MSRTGSGKTAAFVIPMLQKLKRRDTT--GIRALMVSPTRELALQTFKVVKELGRFTGLRC 124
Query: 536 HACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGF 715
+GG + E + ++ TPGR+ +I LR ++ +V DEAD + GF
Sbjct: 125 ACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGF 184
Query: 716 KEQIYDVYRYLPPATQGCAYISNTTP 793
++Q+ + + +P + Q + S T P
Sbjct: 185 QDQLTETLKRIPESRQTLLF-SATLP 209
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 120 bits (288), Expect = 6e-26
Identities = 66/187 (35%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF +GL E+L + G+ P+ IQ + I I+ G+DV+A AQ+GTGKTA F++ +L
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLY 65
Query: 419 TL----DTTL----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 574
L +T++ + LI++PTRELA QI + + G ++ ++ GG N+ I
Sbjct: 66 RLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQI 125
Query: 575 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 754
L G ++ TPGR+ D++ ++ + ++LVLDEAD ML+ GF I V L P
Sbjct: 126 AALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMALLSP 185
Query: 755 ATQGCAY 775
Q +
Sbjct: 186 QRQSLMF 192
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 120 bits (288), Expect = 6e-26
Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF+++ L + +L+ + G+ P+ IQ++SI +++G+D++ AQ+GTGKTA FSI ILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 419 TLDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 592
L T + + L+L+PTRELA QI + A G + ++ GG L G
Sbjct: 62 KLYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSG 121
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCA 772
++ TPGR+ D+I + + S+ VLDEAD ML+ GF I + + L PA +
Sbjct: 122 IQILVATPGRLLDLISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLL-PARRQTL 180
Query: 773 YISNTTP*DI 802
+ S T P +I
Sbjct: 181 FFSATMPPEI 190
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 120 bits (288), Expect = 6e-26
Identities = 70/189 (37%), Positives = 103/189 (54%), Gaps = 1/189 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL-Q 418
F S+ L LL+ + GF +P+ IQ +I P + GRDV+A A +G+GKTA F + IL Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
+D T+ L+++PTRELA QI + + L + A GG ++ G
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVD 122
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
V+ GTPGR+ D R + ++ LVLDEAD ML+ GF I + +++ PA + +
Sbjct: 123 VLIGTPGRLLDHFRAPYAKLAGLEHLVLDEADRMLDMGFLPDIRRILKHI-PARRQTLFF 181
Query: 779 SNTTP*DIG 805
S T P IG
Sbjct: 182 SATMPAPIG 190
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 120 bits (288), Expect = 6e-26
Identities = 71/202 (35%), Positives = 105/202 (51%), Gaps = 5/202 (2%)
Frame = +2
Query: 215 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 394
+ + + F +GL LL+ + G+ P+ IQ ++I ++ GRD++ AQ+GTGKTA
Sbjct: 58 ARETHSLTQFTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTA 117
Query: 395 TFSISILQTL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 559
F++ IL L R + L+LSPTRELATQI + G M + GG
Sbjct: 118 AFALPILHRLAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVK 177
Query: 560 LGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVY 739
G ++ L G VV TPGR+ D + + +++ VLDEAD+ML+ GF I +
Sbjct: 178 YGPQMKALAAGVDVVVATPGRLMDHLGEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIA 237
Query: 740 RYLPPATQGCAYISNTTP*DIG 805
LP Q + S T P +IG
Sbjct: 238 SQLPKERQN-LFFSATMPSEIG 258
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 120 bits (288), Expect = 6e-26
Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
FD +GL L+ G+ P+ IQ R+I + GRDV+ AQ+GTGKTA F + +L
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 422 L-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
L R + LIL+PTREL +QI + + A + +++ +GG +G I++ +
Sbjct: 133 LMKAGTKPAPRTCRGLILAPTRELVSQICESLRAFTEGSHLKLQVIVGGVAIGPQIKRAE 192
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
G ++ TPGR+ D++ R+ LR + LVLDEAD+ML+ GF + + LP Q
Sbjct: 193 RGADLIVATPGRLIDLLDRKALRLSETRFLVLDEADQMLDLGFIHALRKIAPLLPAERQT 252
Query: 767 CAYISNTTP 793
+ S T P
Sbjct: 253 MLF-SATMP 260
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 120 bits (288), Expect = 6e-26
Identities = 60/185 (32%), Positives = 104/185 (56%), Gaps = 1/185 (0%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F + L L + F+ P+ IQ+++ I+ GRDV+ AQ+GTGKT + + +L+
Sbjct: 10 SFQDLNLNTPLRNALEDLNFQTPTPIQEQAFSSIMSGRDVVGIAQTGTGKTFAYLLPLLR 69
Query: 419 TLD-TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
L + + ++LI+ PTREL Q+ + I L ++N++ GG N+ + L G
Sbjct: 70 MLKYSEQKNPRILIMVPTRELVVQVVEEIEKLAKYINLRVAGVYGGVNINTQHQDLMQGL 129
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
+V TP R++D++ RR ++ +SI+ V+DE D ML+ GFK Q+ ++ LP Q +
Sbjct: 130 DIVVATPRRLYDLVLRRAVQLKSIQKFVIDEVDVMLDLGFKFQVNNIIELLPKNRQSIMF 189
Query: 776 ISNTT 790
+ T
Sbjct: 190 SATMT 194
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 120 bits (288), Expect = 6e-26
Identities = 67/192 (34%), Positives = 115/192 (59%), Gaps = 4/192 (2%)
Frame = +2
Query: 146 TSSEVSSNRKILSEDLSNVEF--DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQ 319
TS++ + ++ +++S+ T + + + + L +LL+GI GF KPS IQ
Sbjct: 67 TSNDFMRPKHVMLDEISDALLVDGTQFNENINMQWSQLPLSPDLLKGIQNMGFAKPSKIQ 126
Query: 320 QRSILPIVKGR--DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQ 493
Q + LP++ G ++IAQA++G+GKTATF++++L ++ + Q L + PTRELATQ
Sbjct: 127 QCA-LPLILGSCTNIIAQAKNGSGKTATFALAMLSKVNVNVPLVQALCICPTRELATQNV 185
Query: 494 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKM 673
+VI LG F ++C + ED + H+ GTPG+ D +++R++ ++ M
Sbjct: 186 QVIQKLGQFTQIKCFLGVPQCPRYED----NDQYHLYVGTPGKTMDFLKKRIMNVTNVVM 241
Query: 674 LVLDEADEMLNK 709
LVLDEADE++N+
Sbjct: 242 LVLDEADELINQ 253
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 119 bits (287), Expect = 8e-26
Identities = 70/189 (37%), Positives = 107/189 (56%), Gaps = 14/189 (7%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F + L L+ + +++P+ IQ ++I I+ G+DV+A AQ+GTGKTA F++ +L
Sbjct: 2 SFADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLLH 61
Query: 419 TL-----------DTT-LRETQV--LILSPTRELATQIQKVILALGDFMNVQCHACIGGT 556
L DT + T + L+L PTRELA Q+ I +V GG
Sbjct: 62 QLLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGGV 121
Query: 557 NLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDV 736
++GE IR+L G H++ TPGR+ D++R+R L + LV DEAD ML+ GFK++I +V
Sbjct: 122 SIGEQIRQLANGTHILVATPGRLLDLLRKRALSLSQLTHLVFDEADRMLDMGFKDEIVEV 181
Query: 737 YRYLPPATQ 763
+ LP Q
Sbjct: 182 LKRLPSTRQ 190
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 119 bits (287), Expect = 8e-26
Identities = 69/188 (36%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
Frame = +2
Query: 197 NVEFDTSED--VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 370
N++ + S D + I +F++ GLR+ +L I G++KP+ +Q+ ++ I+ GRD++A A
Sbjct: 181 NIQVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACA 240
Query: 371 QSGTGKTATFSISILQTL---------DTTLRETQVLILSPTRELATQIQKVILALGDFM 523
Q+G+GKTA F++ I+ TL +T E QV+I+SPTREL QI + I+
Sbjct: 241 QTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNS 300
Query: 524 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEML 703
++ GGT++ KL G H++ TPGR+ D + + ++ S++ LVLDEAD ML
Sbjct: 301 ILKTVVAYGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVLDEADRML 360
Query: 704 NKGFKEQI 727
+ GF I
Sbjct: 361 DMGFLPSI 368
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 119 bits (286), Expect = 1e-25
Identities = 68/185 (36%), Positives = 105/185 (56%), Gaps = 1/185 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F+++ L L R I G+ + IQ+++I + +D+I ++ +GTGKT F + ILQ
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPILQN 62
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 598
L+T L++ Q +IL PT ELA+QI + + ++ V GG+++ I L +
Sbjct: 63 LNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEGVNATLICGGSHIQRQIYAL-RKSN 121
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
++ GTPGR+ D I R+ LR IK +VLDEADEML GFK + V++ P Q +
Sbjct: 122 IIVGTPGRIADHINRKTLRLDKIKTIVLDEADEMLKMGFKTDLDKVFQNAPNKYQTLLF- 180
Query: 779 SNTTP 793
S T P
Sbjct: 181 SATMP 185
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 119 bits (286), Expect = 1e-25
Identities = 66/176 (37%), Positives = 100/176 (56%), Gaps = 5/176 (2%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F + + E+ +GI GF + + IQ++++ + G+DV QAQ+GTGKTATF ISI
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 422 LDTTLR-----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
L + + + LIL+PTREL QI+K ALG + A GG + + L
Sbjct: 63 LLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDALK 122
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 754
G +V GTPGR+ D ++++V + ++ LV+DEAD M + GF + + R LPP
Sbjct: 123 AGADIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRMFDMGFIADLRFILRRLPP 178
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 119 bits (286), Expect = 1e-25
Identities = 69/187 (36%), Positives = 105/187 (56%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F+ +G++ +L + GFEK IQ+ +I ++ GRDV+ QA +GTGKT +SIS+LQ
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 601
+ Q LI++PTRELA QI + + + V+ A GG ++G + L G +
Sbjct: 64 IKEG-GGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEI 122
Query: 602 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYIS 781
+ TPGR+ D I+R + + LVLDEAD ML+ GF + I + L P + + S
Sbjct: 123 LVATPGRLIDHIKRGSISIDRVTHLVLDEADTMLDMGFIDDIQFILD-LTPDEKVMSLFS 181
Query: 782 NTTP*DI 802
T P +I
Sbjct: 182 ATMPIEI 188
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 118 bits (285), Expect = 1e-25
Identities = 62/185 (33%), Positives = 101/185 (54%), Gaps = 1/185 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F+ + + ++ + + F + IQ I I+KG DVI QAQ+GTGKT F I I++
Sbjct: 5 FEQLPILEQTKKALKELNFIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPIIEK 64
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQH 598
++ +++TQ LIL PTREL Q+ + + L F ++ GG + + R L+ H
Sbjct: 65 IEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEIRIAVVYGGESYTKQFRALEAKPH 124
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYI 778
++ TPGR D + R + ++K+L LDEADEML GF+E + + + +P Q +
Sbjct: 125 LIIATPGRAIDHLERGKIDLSALKILTLDEADEMLKMGFQEALETILKKIPEERQTVLFS 184
Query: 779 SNTTP 793
+ P
Sbjct: 185 ATLPP 189
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 118 bits (285), Expect = 1e-25
Identities = 67/188 (35%), Positives = 102/188 (54%), Gaps = 3/188 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F +GL ELL+ + G+E+P+ +Q +I ++ RD+IA AQ+GTGKTA+F + ++
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID 61
Query: 419 TLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
L R + LIL PTRELA Q+ + G + + IGG + E L+
Sbjct: 62 ILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALEK 121
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
G V+ TPGR+ D+ R + S +MLV+DEAD ML+ GF I + LP + Q
Sbjct: 122 GVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPTSRQTL 181
Query: 770 AYISNTTP 793
+ + P
Sbjct: 182 LFSATMPP 189
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 118 bits (285), Expect = 1e-25
Identities = 65/185 (35%), Positives = 110/185 (59%), Gaps = 1/185 (0%)
Frame = +2
Query: 200 VEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSG 379
VE D +D + PTF+ +G+ EL R G+++P+ IQ +I + G+D+I A++G
Sbjct: 30 VEEDDDKDDDT-PTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETG 88
Query: 380 TGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 559
+GKTA F+I ILQ L + LIL+PTREL+ QI++ +++LG + + +GG +
Sbjct: 89 SGKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLD 148
Query: 560 LGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDV 736
+ +L H++ G+PGR+ D ++ + +IK LVLDEAD++L+ F + + +
Sbjct: 149 MVSQALQLSKKPHIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLLSTDFDDSLNKI 208
Query: 737 YRYLP 751
LP
Sbjct: 209 ITSLP 213
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 118 bits (285), Expect = 1e-25
Identities = 73/192 (38%), Positives = 109/192 (56%), Gaps = 2/192 (1%)
Frame = +2
Query: 194 SNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQA 370
++VEFD S F M L + +LRG+ F PS IQ R+I P+ K G D++ QA
Sbjct: 14 ADVEFDLSLQ------FSKMFLSEPVLRGLTRNNFTHPSPIQARAI-PLAKLGLDLLVQA 66
Query: 371 QSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACI 547
+SGTGKT F++ I + + + Q L + PTRE+A QI+ V+ +G N + + I
Sbjct: 67 KSGTGKTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFI 126
Query: 548 GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQI 727
GG ++ +D + L VV GTPGR+ +I+ VL T IK+LVLDEAD ++ K ++
Sbjct: 127 GGLDISQDRKNLQSCSAVV-GTPGRINHLIKSNVLNTSQIKILVLDEADSLITGSLKPEV 185
Query: 728 YDVYRYLPPATQ 763
+ + LP Q
Sbjct: 186 DQIVKMLPTKRQ 197
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 118 bits (285), Expect = 1e-25
Identities = 68/191 (35%), Positives = 111/191 (58%), Gaps = 13/191 (6%)
Frame = +2
Query: 218 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 397
E+ EV+ TF +G+R+EL++ G++ PS IQ ++ ++G+DVI AQ+G+GKT
Sbjct: 3 EENEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGA 62
Query: 398 FSISILQTLDTTLRETQ------------VLILSPTRELATQIQKVILALGDFMNVQCHA 541
F+I ILQ L + +++ +LSPTRELA QI + ALG ++++C
Sbjct: 63 FAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAV 122
Query: 542 CIGGTNLGEDIRKLDYGQHVVSGTPGRVFD-MIRRRVLRTRSIKMLVLDEADEMLNKGFK 718
+GG + + L HV+ TPGR++D M + +S+K LVLDEAD +LN+ F+
Sbjct: 123 LVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFE 182
Query: 719 EQIYDVYRYLP 751
+ + + +P
Sbjct: 183 KSLNQILEEIP 193
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 118 bits (284), Expect = 2e-25
Identities = 68/186 (36%), Positives = 114/186 (61%), Gaps = 2/186 (1%)
Frame = +2
Query: 251 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISILQTLD 427
MG ++L G+ GF++PS IQ ++I P+ + G D+I +A+SGTGKT F I L+ +D
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAI-PLGRCGFDLIMRAKSGTGKTLVFCIISLEMID 59
Query: 428 TTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDYGQHVV 604
+ QVLIL+PTRE+A QI +V ++G + +++ IGG + D +K++ Q +
Sbjct: 60 IDISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAIENDKKKVNNCQ-IA 118
Query: 605 SGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYISN 784
G PGR+ +I + L+ ++++ VLDEAD+++ F++ I ++ LP + Q A S
Sbjct: 119 VGAPGRIRHLIDKGFLKVENVRLFVLDEADKLMETSFQKDINYIFSKLPLSKQVIA-SSA 177
Query: 785 TTP*DI 802
T P D+
Sbjct: 178 TYPGDL 183
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 118 bits (284), Expect = 2e-25
Identities = 64/186 (34%), Positives = 107/186 (57%), Gaps = 3/186 (1%)
Frame = +2
Query: 227 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 406
E++ F ++L GI T G+ + IQ ++I I++GRDV+ AQ+GTGKTA +++
Sbjct: 10 ELLVNFTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYAL 69
Query: 407 SILQTL-DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG-TNLGEDIRK 580
+LQ L + + + LILSPTR+LA QI + G +++C GG N +
Sbjct: 70 PLLQQLTEGPPGQLRALILSPTRDLADQICVAMNHFGRQTHLRCATIYGGKINYTRQYQL 129
Query: 581 LDYGQHVVSGTPGRVFDMIR-RRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 757
L G ++ PGR+ D+++ ++ + +K LVLDEAD + + GF++ IY + ++LPP
Sbjct: 130 LTGGVDIIVACPGRLLDLLQGKKNNFLQQVKHLVLDEADHLFDHGFRDAIYHILKHLPPR 189
Query: 758 TQGCAY 775
Q +
Sbjct: 190 RQNLLF 195
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 118 bits (284), Expect = 2e-25
Identities = 60/173 (34%), Positives = 104/173 (60%), Gaps = 4/173 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F + L EL + G+E+P+ IQ ++I +++G D++A+AQ+GTGKTA+F++ I++
Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64
Query: 419 TLDTT----LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
L R + L+L+PTRELA Q+ L G + ++ + GG + I++L
Sbjct: 65 KLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLK 124
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRY 745
G ++ TPGR+ D++R++ + ++ LVLDEAD ML+ GF + I + Y
Sbjct: 125 RGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDY 177
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 118 bits (284), Expect = 2e-25
Identities = 66/171 (38%), Positives = 98/171 (57%), Gaps = 1/171 (0%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISILQ 418
F ++GL + + + GF++PS IQ+++I ++ + D+I QAQ+GTGKTA F + I+Q
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQ 63
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
++ L++ Q LIL PTRELA Q+ + I + + GG + + R L G
Sbjct: 64 KIEPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKKGVD 123
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 751
+V TPGR I L S++ LVLDEADEMLN GF E + V + P
Sbjct: 124 LVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASP 174
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 118 bits (284), Expect = 2e-25
Identities = 64/182 (35%), Positives = 103/182 (56%), Gaps = 4/182 (2%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F +GL L++ + G+ P+ IQ ++I I+ G++V+A AQ+GTGKTA+F + +L
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 422 LDTT--LRETQV--LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
+R +V +IL+PTRELA Q+++ I ++ + A GG + ++L
Sbjct: 63 FADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
G ++ TPGR+ DM +R +R + +LVLDEAD ML+ GF E I + LP Q
Sbjct: 123 GVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPEQRQNL 182
Query: 770 AY 775
+
Sbjct: 183 LF 184
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 118 bits (284), Expect = 2e-25
Identities = 65/188 (34%), Positives = 105/188 (55%), Gaps = 4/188 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F SM L +L+G+ GFE P+ IQ ++I + G+D++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 419 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
L + T+VLIL PTRELA Q V + F ++ CIGG +L ++L
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRK 379
Query: 590 GQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
+V TPGR D +R + +I+++V+DEAD ML GF +++ ++ + P + Q
Sbjct: 380 RPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQT 439
Query: 767 CAYISNTT 790
+ + T
Sbjct: 440 MLFSATMT 447
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 118 bits (283), Expect = 2e-25
Identities = 70/206 (33%), Positives = 112/206 (54%), Gaps = 5/206 (2%)
Frame = +2
Query: 134 IRKMTSSEVSSNRKILSEDLSNVEFDTSEDV-EVIPTFDSMGLRDELLRGIYTYGFEKPS 310
++K + EV N + + S+ + + E+ E I F + G+R + + ++ G +
Sbjct: 67 VKKEKNGEVQQNGIVKEKPSSSKQGEVDEETQEKIGAFSNFGIRPKTIEKLHAKGVKYLF 126
Query: 311 AIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL----QTLDTTLRETQVLILSPTREL 478
IQ ++ PI G DVIAQA++GTGKT +F + ++ Q + R+ +L L+PTREL
Sbjct: 127 PIQAQTFKPIDDGFDVIAQARTGTGKTLSFVLPLVEKWQQFPQKSGRQPIILALAPTREL 186
Query: 479 ATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRT 658
A QI + A+G ++ C GGT+ + G VV GTPGR+ D IR+ L
Sbjct: 187 AKQISEYFEAIGPHLSTTC--IYGGTSYWPQESAIRRGLDVVVGTPGRILDYIRKNTLDL 244
Query: 659 RSIKMLVLDEADEMLNKGFKEQIYDV 736
+K +VLDE D ML+ GF E + ++
Sbjct: 245 SKLKHVVLDEVDRMLDMGFAESVEEI 270
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 118 bits (283), Expect = 2e-25
Identities = 64/181 (35%), Positives = 105/181 (58%), Gaps = 6/181 (3%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F S+GL D + + G+++P+AIQ ++I ++KG D+IA A++G+GKTA F + +L+
Sbjct: 2 SFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLLE 61
Query: 419 TLDTTLRE----TQVLILSPTRELATQIQKVILALGDFM--NVQCHACIGGTNLGEDIRK 580
L + T L+L PTRELA Q+ + + + ++ A GG + ++
Sbjct: 62 KLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQS 121
Query: 581 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 760
L G +V TPGR+ D++R+ L R +K LVLDEAD ML+ GF +++ D+ P
Sbjct: 122 LSKGCDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFADELDDILDQTPGNV 181
Query: 761 Q 763
Q
Sbjct: 182 Q 182
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 118 bits (283), Expect = 2e-25
Identities = 67/175 (38%), Positives = 96/175 (54%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F + L E L + GFE P+ IQ ++I P + G+DVI A +GTGKTA F + ++
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLID 64
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
L T+ L+L+PTRELA QI + + G V+ IGG + + L +
Sbjct: 65 RL-AGKPGTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKRE 123
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
+V TPGR+ D + + R I+ LVLDEAD ML+ GFK Q+ + R LP Q
Sbjct: 124 IVIATPGRLVDHLEQGNARLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQRQ 178
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 118 bits (283), Expect = 2e-25
Identities = 59/165 (35%), Positives = 95/165 (57%), Gaps = 1/165 (0%)
Frame = +2
Query: 272 LRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQV 451
L + G+ + +Q ++ I+ G+DV QA++G+GKTA F + +LQ +D +L +TQ
Sbjct: 15 LTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQA 74
Query: 452 LILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVF 628
L+L PTRELA Q+ + L F+ N + GG G L + H++ TPGR+
Sbjct: 75 LVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLL 134
Query: 629 DMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
D +++ + ++ LV+DEAD ML+ GF + I DV R+ P + Q
Sbjct: 135 DHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQ 179
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 117 bits (282), Expect = 3e-25
Identities = 65/170 (38%), Positives = 97/170 (57%), Gaps = 5/170 (2%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F+S E+LR I G++ + +QQ++I I +G DV+A AQ+GTGKTA F++ ILQ
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 422 LDT---TLRET--QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
+ T++ + + LIL+PTRELA Q+ I A MN+ GG + +KL
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQKLK 122
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDV 736
G ++ TPGR+ + I L +++ LVLDEAD ML+ GF I +
Sbjct: 123 QGADIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLDMGFSTDIQKI 172
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 117 bits (282), Expect = 3e-25
Identities = 63/184 (34%), Positives = 110/184 (59%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
++S+GL LL+ I G++ PS +Q SI ++ G++++ ++++GTGKTA++ + +L
Sbjct: 110 WESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGKTASYIVPMLNM 169
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 601
++++ Q +IL P RELA QI + + + + V +GGT++ +DI ++ G HV
Sbjct: 170 INSSELSIQGIILVPIRELALQISRNVKRMSEGTGVISAPVVGGTSMQDDIIRVSNGVHV 229
Query: 602 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYIS 781
+ GTPGR+ D++ +RV +LV DEAD++L+ F E + + LP Q Y S
Sbjct: 230 MVGTPGRIVDLVEKRVGTLSKRVILVFDEADKLLDVTFGETVTKLLDLLPREKQMLLY-S 288
Query: 782 NTTP 793
T P
Sbjct: 289 ATFP 292
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 117 bits (282), Expect = 3e-25
Identities = 69/185 (37%), Positives = 101/185 (54%), Gaps = 3/185 (1%)
Frame = +2
Query: 257 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 436
L+ ELLR I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQ ++
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN 110
Query: 437 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG-QHVVSG 610
+ VL++ TRELA QI K +M +V+ GG ++ +D L HVV G
Sbjct: 111 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVG 170
Query: 611 TPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQGCAYISNT 787
TPGR+ ++R R +++K VLDE D+ML + + + +++R L P + C S T
Sbjct: 171 TPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFR-LTPHEKQCMMFSAT 229
Query: 788 TP*DI 802
DI
Sbjct: 230 LSKDI 234
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 117 bits (281), Expect = 4e-25
Identities = 65/190 (34%), Positives = 106/190 (55%), Gaps = 3/190 (1%)
Frame = +2
Query: 233 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 412
+P+F + + + GFE+P+ +Q++ I I KG+ VI Q+Q+G+GKT TF + +
Sbjct: 1 MPSFKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPL 60
Query: 413 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM--NVQCHACIGGTNLGEDIRKLD 586
+ + T+ E Q++I +P+RELA QI + L F ++ +GGT+ + KL
Sbjct: 61 MDKVKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTDKQRQLNKLK 120
Query: 587 YGQ-HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
+ Q HVV GTPGR+ DM+ + L+ + V+DEAD L+ GF ++ + LP Q
Sbjct: 121 HQQPHVVIGTPGRILDMMNEQALKVHTAFAFVVDEADMTLDMGFLAEVDQIAGRLPEKLQ 180
Query: 764 GCAYISNTTP 793
+ S T P
Sbjct: 181 MLVF-SATIP 189
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 117 bits (281), Expect = 4e-25
Identities = 71/195 (36%), Positives = 108/195 (55%), Gaps = 4/195 (2%)
Frame = +2
Query: 221 DVEVIPT----FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 388
DVE++P F + L +L+ + F++PS IQ +I I K +D+IA +Q+G+GK
Sbjct: 6 DVELLPQEPNGFITFNLDPLILKALDKMNFKEPSRIQTEAIPLIQKKQDLIALSQTGSGK 65
Query: 389 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 568
TAT +I I ++T L + Q LI+ PTRELA Q +G + V+ A GG +
Sbjct: 66 TATCAIPICNRVNTELTDIQALIIVPTRELALQYATETQKIGKYKGVKAFAIFGGEDSAL 125
Query: 569 DIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYL 748
KL +G V+ TPGR+ D I R + ++ L+LDEADEML+ GF + + + + L
Sbjct: 126 QQSKLKHGVQVLVATPGRLIDFIYSRQIDLSHVETLILDEADEMLSMGFYDDLVFIIQCL 185
Query: 749 PPATQGCAYISNTTP 793
+ Q + S T P
Sbjct: 186 NHSHQTLLF-SATMP 199
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 117 bits (281), Expect = 4e-25
Identities = 66/195 (33%), Positives = 105/195 (53%), Gaps = 3/195 (1%)
Frame = +2
Query: 218 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 397
E+V+ P F +GL + + R I G+ P+ IQ ++I ++ GRDV+ AQ+GTGKTA+
Sbjct: 217 EEVDDRPLFADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTAS 276
Query: 398 FSISILQTLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 568
F++ ++ L R + LIL PTRELA Q+ + + G ++ + IGG ++ +
Sbjct: 277 FTLPMMDILSDRRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMND 336
Query: 569 DIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYL 748
L G V+ TPGR+ D+ R L ++LV+DEAD ML+ GF + + L
Sbjct: 337 QRDVLSKGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLL 396
Query: 749 PPATQGCAYISNTTP 793
P Q + + P
Sbjct: 397 PHNRQTLFFSATMAP 411
>UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 577
Score = 117 bits (281), Expect = 4e-25
Identities = 63/192 (32%), Positives = 97/192 (50%)
Frame = +2
Query: 218 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 397
E + +P+ L L G++ +Q ++ + GRD++ Q+++G+GKT
Sbjct: 31 EPEDALPSVQFADLAPRLQEACIRAGWQSLMPVQAHALPYLFDGRDLMVQSRTGSGKTGA 90
Query: 398 FSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIR 577
F + +L+ LD TQ L+L PTRELA Q++ L + ++ A GG G+
Sbjct: 91 FLLPLLERLDPAEASTQALVLVPTRELALQVEHEARTLFEGTGLRVAAVYGGVGYGKQND 150
Query: 578 KLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 757
L G H V GTPGRV D + RR ++ ++ L DEAD ML+ GF + ++ RYLP
Sbjct: 151 ALREGAHFVVGTPGRVLDHLLRRTMQLDRLRALTFDEADRMLSIGFYPDMKEIQRYLPKR 210
Query: 758 TQGCAYISNTTP 793
S T P
Sbjct: 211 RIATCLFSATYP 222
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 117 bits (281), Expect = 4e-25
Identities = 62/181 (34%), Positives = 101/181 (55%), Gaps = 8/181 (4%)
Frame = +2
Query: 245 DSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL 424
D+ G+ + ++ + G + IQQ + P + G+DV+ +A++GTGKT FS+ +++ L
Sbjct: 28 DNFGMSETTVQALRKRGVDALFPIQQAVLRPAMDGQDVVGRARTGTGKTLAFSLPVIEKL 87
Query: 425 DTT--------LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRK 580
+ R + ++L+PTRELA Q++ I ++ C GGT +G+ K
Sbjct: 88 LSNGRGSGGRGYRNPKCIVLAPTRELAKQVENEIFITAPTLDTAC--VYGGTPIGQQESK 145
Query: 581 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 760
L G +V GTPGR+ D++ RR L I+ +VLDEAD+MLN GF+E + + P
Sbjct: 146 LRRGVDIVVGTPGRIMDLMNRRALDLSEIEFVVLDEADQMLNVGFEEDVEAILHDCPAGR 205
Query: 761 Q 763
Q
Sbjct: 206 Q 206
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 117 bits (281), Expect = 4e-25
Identities = 73/194 (37%), Positives = 100/194 (51%), Gaps = 5/194 (2%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ- 418
F+ GL D +L GF KP+AIQ + + + GRD++ AQ+G+GKT + L
Sbjct: 124 FEQGGLPDYILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYIAPALVH 183
Query: 419 -TLDTTLRETQ---VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
T LR L+L+PTRELA QIQ+V G +N GG G IR L+
Sbjct: 184 ITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLE 243
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
G +V TPGR+ D + R + R LVLDEAD ML+ GF+ QI + + P Q
Sbjct: 244 RGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDRQV 303
Query: 767 CAYISNTTP*DIGN 808
+ S T P ++ N
Sbjct: 304 LMW-SATWPKEVRN 316
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 116 bits (280), Expect = 6e-25
Identities = 62/179 (34%), Positives = 100/179 (55%), Gaps = 4/179 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F+ L+ +LLR + GFE+PS +Q + I + G+DV+ QA++GTGKTA F +S+L
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ- 595
L + L+L TRELA QI+ LG F N + A GG DI L +
Sbjct: 99 QLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFTNFKVKAVYGGVEESVDIHTLKTKKP 158
Query: 596 HVVSGTPGRVFDMIRRR--VLRTRSIKMLVLDEADEMLNKG-FKEQIYDVYRYLPPATQ 763
H++ TPGR +I+ + V+ T++I+ ++DE D +L+ + + +++ LP Q
Sbjct: 159 HILVATPGRCLSLIKAKPSVIETQNIEYFIIDECDRVLSSNKMRSDVQNIFYELPRKKQ 217
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 116 bits (280), Expect = 6e-25
Identities = 65/192 (33%), Positives = 110/192 (57%), Gaps = 7/192 (3%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F+ + D L R + F + + IQ ++I I +G+D++A++Q+GTGKT FS +++
Sbjct: 2 SFEQLNFPDYLSRAVDNLNFSEATDIQAKAIPLIQEGKDLLAESQTGTGKTLAFSFPLIE 61
Query: 419 TLDTTLRETQV-----LILSPTRELATQIQKVILALGDFM--NVQCHACIGGTNLGEDIR 577
++T + + L+L PTRELA Q++K +F ++ IGG N+ IR
Sbjct: 62 RINTLPPKKKKISILGLVLVPTRELALQVEKAFTNYAEFSLRPIKTATLIGGENIDGQIR 121
Query: 578 KLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 757
KL G V+ TPGR+ ++I +R ++ML+LDEAD+ML+ GF +++ ++ LP
Sbjct: 122 KLRMGLDVLIATPGRIIELINLGEVRLVELEMLILDEADKMLDLGFADELKELLEALPKK 181
Query: 758 TQGCAYISNTTP 793
Q + S T P
Sbjct: 182 RQNLLF-SATLP 192
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 116 bits (280), Expect = 6e-25
Identities = 67/186 (36%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F+SMGL EL R I + GF P+ IQ+++I I+ GRD++A +++G+GKTA F I ++
Sbjct: 12 FESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPLINK 71
Query: 422 LD--TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
L +T+ + LIL PTRELA QI V+ AL F ++Q +GG L
Sbjct: 72 LQNHSTVVGIRGLILLPTRELALQIASVLKALLKFSDIQYSIMVGGHGFEGQFESLASNP 131
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
++ TPGRV + L+ ++M++ DEAD + G +Q+ + +LP Q +
Sbjct: 132 DILICTPGRVLQHLLEDRLKLSRVQMVIYDEADFLFEMGLADQLKQILSHLPSQKQSLMF 191
Query: 776 ISNTTP 793
S T P
Sbjct: 192 -SATIP 196
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 116 bits (279), Expect = 7e-25
Identities = 69/192 (35%), Positives = 103/192 (53%), Gaps = 5/192 (2%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F S+ + + +L+ I G++ P+ IQ +I I+ G D++ AQ+GTGKTA F+I +LQ
Sbjct: 84 FRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIPVLQL 143
Query: 422 LDTTL-----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
L+ R+ + LI++PTRELA QI + A G + GG N L
Sbjct: 144 LNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNPQTASLQ 203
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
G ++ TPGR+ D++ + L R+I+ VLDEAD ML+ GF I + LP Q
Sbjct: 204 KGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAELPKKKQS 263
Query: 767 CAYISNTTP*DI 802
+ S T P +I
Sbjct: 264 -LFFSATMPPEI 274
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 116 bits (279), Expect = 7e-25
Identities = 67/187 (35%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F L+ E+L ++ G P+ IQ ++ ++G+D+I QA++GTGKT F++ I +
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62
Query: 422 LDTTL---RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 592
L + R+ + L+L+PTRELA Q+ + A+ + V A GGT G+ L G
Sbjct: 63 LAPSQERGRKPRALVLTPTRELALQVASELTAVAPHLKVV--AVYGGTGYGKQKEALLRG 120
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCA 772
V TPGR D +R+ VL +++ VLDEADEML+ GF+E++ + PP+ Q
Sbjct: 121 ADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPSRQTLL 180
Query: 773 YISNTTP 793
+ S T P
Sbjct: 181 F-SATLP 186
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 116 bits (279), Expect = 7e-25
Identities = 65/172 (37%), Positives = 94/172 (54%), Gaps = 3/172 (1%)
Frame = +2
Query: 257 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 436
L+ ELLR I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQ L+
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 437 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG-QHVVSG 610
+ VL++ TRELA QI K +M NV+ GG ++ +D L H+V G
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 611 TPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQ 763
TPGR+ + R + L + IK +LDE D+ML + + + +++R P Q
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQ 223
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 116 bits (278), Expect = 1e-24
Identities = 66/186 (35%), Positives = 102/186 (54%), Gaps = 2/186 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F SM L +L+GI G++ P+ IQ+++I ++GRD++A A++G+GKTA F I + +
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 422 LDTTLRET--QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
L + + LILSPTRELA Q K I LG F ++ +GG N+ +
Sbjct: 98 LKIRQAKVGARALILSPTRELALQTLKFIKELGRFTGLKATIILGGDNMENQFSAIHGNP 157
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
++ TPGR + L+ +I+ +V DEAD + GF EQI ++ LP + Q +
Sbjct: 158 DILIATPGRFLHICIEMDLQLNNIEYVVFDEADRLFEMGFGEQINEIINRLPESRQTLLF 217
Query: 776 ISNTTP 793
S T P
Sbjct: 218 -SATLP 222
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 116 bits (278), Expect = 1e-24
Identities = 65/188 (34%), Positives = 107/188 (56%), Gaps = 5/188 (2%)
Frame = +2
Query: 227 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 406
++ F+S+ L +L+G+ + G+ KPS IQ +I + G+D+IA A +G+GKTA F I
Sbjct: 228 QMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMI 287
Query: 407 SILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDI 574
I++ L + T+V++L PTRELA Q+ V + F++ + +GG NL +
Sbjct: 288 PIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQE 347
Query: 575 RKLDYGQHVVSGTPGRVFDMIRRRV-LRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 751
+ L +V TPGR D IR S+++LV+DEAD ML +GF++++ ++ LP
Sbjct: 348 QMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLP 407
Query: 752 PATQGCAY 775
Q +
Sbjct: 408 SNRQNLLF 415
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 115 bits (277), Expect = 1e-24
Identities = 58/163 (35%), Positives = 101/163 (61%), Gaps = 1/163 (0%)
Frame = +2
Query: 266 ELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET 445
EL + + G+++P+ IQ+ +I ++G D++ QA +GTGKT F+I I++ L +
Sbjct: 10 ELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDV 69
Query: 446 QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL-DYGQHVVSGTPGR 622
+ L+L+PTRELA Q+++ I L + + + GGT++ +++ L + ++ GTPGR
Sbjct: 70 KALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNVDILIGTPGR 129
Query: 623 VFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 751
+ D+I R+ L ++ LVLDE D+ML+ GF E I + +LP
Sbjct: 130 IKDLIDRKALNLSKVEYLVLDEFDQMLDMGFIEDIEYIISFLP 172
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 115 bits (277), Expect = 1e-24
Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 6/190 (3%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
FD + L DE+L G+ F + + +Q +I PI++GRDVIA AQ+GTGKTA + + IL
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPILDR 62
Query: 422 LDTTLRETQV---LILSPTRELATQIQKVILALGDFMNVQCHACIGGTN---LGEDIRKL 583
L + V +I++PTRELA QI + + FM V A GGT+ + R +
Sbjct: 63 LSAGEFASDVVNAVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTDGVAWEQQRRGM 122
Query: 584 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
G +V TPGR+ + + VLDEAD ML+ GF + I +Y+ LP + Q
Sbjct: 123 AMGADIVIATPGRLISHLNLGSADLSHVSYFVLDEADRMLDMGFFDDIMQIYKQLPSSCQ 182
Query: 764 GCAYISNTTP 793
+ + P
Sbjct: 183 TVMFSATMPP 192
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 115 bits (277), Expect = 1e-24
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 1/203 (0%)
Frame = +2
Query: 197 NVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQS 376
N+ +TSE + F+ + L LL + G+++ + +Q S+ I+ D + +A +
Sbjct: 8 NISDNTSETSPELLHFNQLNLPPALLTRLDEIGYQQMTPVQSLSLPVILNNTDAVVRADT 67
Query: 377 GTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGG 553
G+GKT F++++L L+ Q L+L PTRELA Q+ + L +N++ GG
Sbjct: 68 GSGKTTAFALTLLAKLEAKSFSPQALVLCPTRELAHQVADEVRKLAKSMLNIKILTLCGG 127
Query: 554 TNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYD 733
L++G HV+ GTPGRV D + +R + + LVLDEAD ML GF++ +
Sbjct: 128 EPSRIQTNSLEHGAHVLVGTPGRVLDHLEQRNVDLSMLTTLVLDEADRMLEMGFQDSLNA 187
Query: 734 VYRYLPPATQGCAYISNTTP*DI 802
+ +++P Q + S T P +I
Sbjct: 188 IVKHIPKTRQTLLF-SATYPKNI 209
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 115 bits (276), Expect = 2e-24
Identities = 71/189 (37%), Positives = 101/189 (53%), Gaps = 4/189 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F +GL ++ + G++ P IQ + I ++KG D++ A +G+GKTA F + +LQ
Sbjct: 7 SFVDLGLNTYIVDMLSNIGYQAPLPIQTQCIPLLLKGCDLLGMAHTGSGKTAAFLLPLLQ 66
Query: 419 TLDTTLRETQVLILSPTRELATQIQKV----ILALGDFMNVQCHACIGGTNLGEDIRKLD 586
+D R Q LI+ PTRELA QI V I +L +N+ GG N L
Sbjct: 67 NIDIKQRFVQGLIIVPTRELAIQIGHVCMYFIKSLSHIINIA--VLYGGQNYRIQFNDLK 124
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
H++ GTPGR+ D + R L +K L++DEADEML GF E I + RY+P Q
Sbjct: 125 KNPHIIIGTPGRLLDHLSRG-LDISKLKTLIIDEADEMLRMGFIEDIEHIIRYVPTHRQ- 182
Query: 767 CAYISNTTP 793
A S T P
Sbjct: 183 TALFSATLP 191
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 115 bits (276), Expect = 2e-24
Identities = 70/189 (37%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL- 415
TF+ LL + + GF KP+ IQ +I I+ D++A AQ+GTGKTA + + IL
Sbjct: 2 TFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPILH 61
Query: 416 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG---TNLGEDIRKLD 586
+ +++ L+L PTRELA QI + I F+NV A GG + + L
Sbjct: 62 KIIESNTDSLDTLVLVPTRELAIQIDQQIEGFSYFINVSSIAVYGGGDGATWDQQRKALT 121
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
G ++V TPGR+ ++ + IK LVLDEAD ML+ GF + I V YLP Q
Sbjct: 122 DGANIVIATPGRLLAQLQSGTANLKQIKHLVLDEADRMLDMGFYDDIVRVISYLPTERQT 181
Query: 767 CAYISNTTP 793
+ S T P
Sbjct: 182 IMF-SATMP 189
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 115 bits (276), Expect = 2e-24
Identities = 63/184 (34%), Positives = 104/184 (56%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F L+D + + GF++PS +Q+ +I +++G D+IAQAQ+GTGKTA F + I+
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 601
+ + L++ PTRELA Q+ + G ++ GGT G+ I ++ V
Sbjct: 63 MKAD-GSVEGLVIVPTRELAMQVSDELFRFGKLSGLKTATVYGGTAYGKQIERIKQASIV 121
Query: 602 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYIS 781
V+ TPGR+ D++ ++ +VLDEADEML+ GF ++I +++ +LP Q + S
Sbjct: 122 VA-TPGRLQDLLMSGKIKLNP-HFVVLDEADEMLDMGFLDEIKNIFTFLPKERQTLMF-S 178
Query: 782 NTTP 793
T P
Sbjct: 179 ATMP 182
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 115 bits (276), Expect = 2e-24
Identities = 71/198 (35%), Positives = 112/198 (56%), Gaps = 6/198 (3%)
Frame = +2
Query: 188 DLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQ 367
D + E DVE +F+ +GL ++R ++ FE P+ +Q ++I ++GRDV A
Sbjct: 3 DFFDTETPLPNDVE---SFEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCAS 59
Query: 368 AQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 538
A +G+GKTA F I ++ L +T +T+ +ILSPTRELA Q V+ + F +
Sbjct: 60 AVTGSGKTAAFLIPTVERLLRSKSTEAQTRAVILSPTRELAAQTYSVLSQIIQFTPLTAL 119
Query: 539 ACIGGTN--LGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNK 709
GG++ E+ R L+Y +V TPGR+ D I+ ++ +LVLDE+D +L +
Sbjct: 120 LLTGGSSNVKEEEERLLEYPDFLVC-TPGRIIDHIKNCEGFTLENVLVLVLDESDRLLQE 178
Query: 710 GFKEQIYDVYRYLPPATQ 763
GF QI +V++ LP TQ
Sbjct: 179 GFYSQIEEVHKSLPETTQ 196
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 115 bits (276), Expect = 2e-24
Identities = 63/192 (32%), Positives = 106/192 (55%), Gaps = 4/192 (2%)
Frame = +2
Query: 194 SNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQ 373
++V+ + + I F G+R+E+LR + G++ P+ +Q+ SI I+ G D+I +Q
Sbjct: 107 ADVKVEAGNHIPPIIDFPGCGIRNEVLRNVAHNGYKVPTPVQRYSIPYILNGEDLIVTSQ 166
Query: 374 SGTGKTATFSISILQTLDTTLRETQ--VLILSPTRELATQIQKVILALGDFMNVQCHACI 547
+G+GKTA F + ++ L T + L PTRELA QI + +++
Sbjct: 167 TGSGKTAAFMLPVITQLIGTCHSPNPSCVALCPTRELAIQIFEETRKFCKGTDLKTTCVF 226
Query: 548 GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQI 727
GG + E IR L G +V TPGR+ D++++ + ++ L+LDEAD ML+ GF+ Q+
Sbjct: 227 GGAPITEQIRNLSRGIDIVIATPGRLIDILKQHCITLSEVRFLILDEADRMLDMGFEPQM 286
Query: 728 YDVYR--YLPPA 757
+V +PPA
Sbjct: 287 QEVINGWDMPPA 298
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 115 bits (276), Expect = 2e-24
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 4/188 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF + L LLR T G++KP+ IQ I + GRD+ A A +G+GKTA F++ L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 419 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
L + T+VLIL+PTRELA QI +I L F +++C +GG ++ E L
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287
Query: 590 GQHVVSGTPGRVFDMIRRRV-LRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
+V TPGR+ D +R + + + +L+LDEAD +L GF +I ++ R P Q
Sbjct: 288 MPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQT 347
Query: 767 CAYISNTT 790
+ + T
Sbjct: 348 MLFSATMT 355
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 115 bits (276), Expect = 2e-24
Identities = 67/188 (35%), Positives = 104/188 (55%), Gaps = 4/188 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F M L +LRG+ + GF KP+ IQ ++I + G+DV+ A +G+GKTA F + IL+
Sbjct: 294 SFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILE 353
Query: 419 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
L + T+V+IL+PTRELA Q V + L +++ +GG +L +L
Sbjct: 354 RLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQEAELRL 413
Query: 590 GQHVVSGTPGRVFDMIRRRV-LRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
VV TPGR D +R +I++LVLDEAD ML GF +++ ++ LP + Q
Sbjct: 414 RPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNEILTTLPKSRQT 473
Query: 767 CAYISNTT 790
+ + T
Sbjct: 474 MLFSATMT 481
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 115 bits (276), Expect = 2e-24
Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 4/190 (2%)
Frame = +2
Query: 233 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 412
+ +F M L +LRG+ + GF KP+ IQ ++I + G+DV+ A +G+GKTA F + I
Sbjct: 275 LSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPI 334
Query: 413 LQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL 583
L+ L + T+V++L+PTRELA Q V L +++ +GG +L +L
Sbjct: 335 LERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEGEL 394
Query: 584 DYGQHVVSGTPGRVFDMIRRRV-LRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 760
VV TPGR D +R ++++LVLDEAD ML GF +++ ++ LP +
Sbjct: 395 RLRPDVVIATPGRFIDHMRNSASFAVETVEILVLDEADRMLEDGFADELNEILTTLPKSR 454
Query: 761 QGCAYISNTT 790
Q + + T
Sbjct: 455 QTMLFSATMT 464
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 114 bits (275), Expect = 2e-24
Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 4/185 (2%)
Frame = +2
Query: 233 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS- 409
I +F++ G E+L+ I GF P+ IQ +S ++ +DV+A A++G+GKT + +
Sbjct: 149 ITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPG 208
Query: 410 --ILQTLDTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRK 580
++ L R VL+L+PTRELATQI + + G + GG G +R
Sbjct: 209 FMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRD 268
Query: 581 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT 760
LD G VV TPGR+ D++ R + + + LVLDEAD ML+ GF+ QI + + +PP
Sbjct: 269 LDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRR 328
Query: 761 QGCAY 775
Q Y
Sbjct: 329 QTLMY 333
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 114 bits (275), Expect = 2e-24
Identities = 62/176 (35%), Positives = 97/176 (55%), Gaps = 1/176 (0%)
Frame = +2
Query: 227 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 406
E TF +G+ D L G+ KP+ IQ +I ++GRD+I A++G+GKT F++
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 407 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
IL L T + L+L+PTRELA QI + ALG + VQ +GG + L
Sbjct: 81 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALA 140
Query: 587 YGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 751
H++ TPGR+ D + + R++K LV+DEAD +LN F+ ++ + + +P
Sbjct: 141 KKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIP 196
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 114 bits (274), Expect = 3e-24
Identities = 70/215 (32%), Positives = 113/215 (52%), Gaps = 5/215 (2%)
Frame = +2
Query: 134 IRKMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSA 313
I K+T +V RK +S V + I +F +G +EL+R I GFEKP+
Sbjct: 33 ITKLTEQQVEKIRKEFEIKVSGVR-----PPKPIVSFGHLGFDEELMRQITKLGFEKPTQ 87
Query: 314 IQQRSILPIVKGRDVIAQAQSGTGKTATFS----ISILQTLDTTLRETQV-LILSPTREL 478
IQ +++ + GRD++ A++G+GKT ++ I IL + E + LIL+PTREL
Sbjct: 88 IQCQALPCGLSGRDIVGVAKTGSGKTVSYLWPLLIHILDQRELEKNEGPIGLILAPTREL 147
Query: 479 ATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRT 658
Q+ N+ A +GG N E + L G ++ TPGR+ +MI+++
Sbjct: 148 CQQVYTESKRYAKIYNISVGALLGGENKHEQWKMLKAGVEILIATPGRLMEMIQKKATNL 207
Query: 659 RSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
R +V+DEAD+M + GF++QI + + + P Q
Sbjct: 208 RRCTYVVIDEADKMFSMGFEKQIRSIMQQIRPDRQ 242
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 114 bits (274), Expect = 3e-24
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 3/191 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F ++GL +++L + G+ P+ IQ+++I ++ +DV+ AQ+GTGKTA F + +L
Sbjct: 2 SFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLARKDVLGIAQTGTGKTAAFVLPMLT 61
Query: 419 TLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
L+ R + LIL PTRELA Q+++ G + IGG + G+ KL
Sbjct: 62 ILEKGRARARMPRTLILEPTRELAAQVKENFDRYGAGQKLNVALLIGGVSFGDQDAKLTR 121
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
G V+ TPGR+ D R L +++LV+DEAD ML+ GF I + + L P T+
Sbjct: 122 GVDVLIATPGRLLDHTERGGLLLTGVELLVIDEADRMLDMGFIPDIERICK-LVPFTRQT 180
Query: 770 AYISNTTP*DI 802
+ + T P +I
Sbjct: 181 LFFTATMPPEI 191
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 114 bits (274), Expect = 3e-24
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 10/215 (4%)
Frame = +2
Query: 179 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 358
L D +NVE D E++ + + L L + G IQ+ ++P ++GRD+
Sbjct: 87 LDGDNNNVEADDGEELAI----SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDI 142
Query: 359 IAQAQSGTGKTATFSISILQTLD------TTLRET----QVLILSPTRELATQIQKVILA 508
IA+A++GTGKT F I I++ L T R + + L+L+PTRELA Q++K I
Sbjct: 143 IARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKE 202
Query: 509 LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDE 688
+++ C GG + L G VV GTPGR+ D+I R L+ ++ LVLDE
Sbjct: 203 SAPYLSTVC--VYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDE 260
Query: 689 ADEMLNKGFKEQIYDVYRYLPPATQGCAYISNTTP 793
AD+ML GF+E + + LP Q + S T P
Sbjct: 261 ADQMLAVGFEEAVESILENLPTKRQSMLF-SATMP 294
>UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP8 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 619
Score = 114 bits (274), Expect = 3e-24
Identities = 56/187 (29%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF+S+GL L+ + + +KP+ IQ + PI+ GRD I A++G+GKT F++ I++
Sbjct: 153 TFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVE 212
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
+ ++L+PTRELA Q+ + L +G + + +GG ++ + ++L+ H
Sbjct: 213 RIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDMMKQAQELEARPH 272
Query: 599 VVSGTPGRVFDMIRRRVL---RTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
++ TPGR+ D++R + + ++ LVLDEAD ML F ++ ++ +P Q C
Sbjct: 273 IIVATPGRLCDLLRSGGVGPGKLSRVRTLVLDEADRMLTPSFAPELAYLFSQIPAKRQTC 332
Query: 770 AYISNTT 790
+ + +
Sbjct: 333 LFTATVS 339
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 113 bits (273), Expect = 4e-24
Identities = 59/179 (32%), Positives = 101/179 (56%), Gaps = 3/179 (1%)
Frame = +2
Query: 236 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 415
PTF +GL + ++R + G P IQ +I + G+D++ + ++G+GKT +F + L
Sbjct: 61 PTFADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTL 120
Query: 416 QTLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
TL T + + +IL+PTRELA Q+ + GD + ++ GGT++G I L+
Sbjct: 121 ATLAGGRTEKHKPRAVILTPTRELAMQVADALQPYGDVLGLKMKVVCGGTSMGNQIYALE 180
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
G V+ TPGR+ D+I R ++++ VLDEAD+M + GF ++ ++ +P Q
Sbjct: 181 RGVDVLVATPGRLRDIINRGACSLENVQIAVLDEADQMSDLGFLPEVTELLDQVPAGGQ 239
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 113 bits (273), Expect = 4e-24
Identities = 66/179 (36%), Positives = 101/179 (56%), Gaps = 4/179 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F+ +G+ LL I G+EKP+ IQ R+I I+ DV A AQ+GTGKTA F + +LQ
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 419 ----TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
T D R + L+++PTREL+ QI + + + M + +GG +L + L
Sbjct: 62 RLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKILK 121
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
G +V TPGRV + + + L +++ VLDEAD ML+ GF ++I ++ LP Q
Sbjct: 122 EGVDIVIATPGRVLEHVDKG-LSLSHVEIFVLDEADRMLDMGFMKEIRRIHPILPKRHQ 179
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 113 bits (273), Expect = 4e-24
Identities = 51/150 (34%), Positives = 95/150 (63%)
Frame = +2
Query: 293 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTR 472
GF+KP+ +Q+++ I+ G+DVIA++ +GTGKT +++ +L+ + + Q +IL+P+R
Sbjct: 23 GFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSR 82
Query: 473 ELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVL 652
EL QI +VI ++ + IGG N+ + + KL H++ GTPGRVF++I+ + L
Sbjct: 83 ELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVFELIKAKKL 142
Query: 653 RTRSIKMLVLDEADEMLNKGFKEQIYDVYR 742
+ +K +VLDE D+++ +E + + +
Sbjct: 143 KMHEVKTIVLDETDQLVLPEHRETMKQIIK 172
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 113 bits (273), Expect = 4e-24
Identities = 62/188 (32%), Positives = 106/188 (56%), Gaps = 4/188 (2%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F L ++ + +KP+ IQ R I +KGRD+I Q+Q+GTGKT +F + I+Q
Sbjct: 4 FSHFDLHPFVVEALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIVQN 63
Query: 422 LDTTLRETQVLILSPTRELATQI----QKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
++ L+E Q +I++PTRELA QI + +++ D+ ++ GG + I ++
Sbjct: 64 VNPELQEMQAIIVAPTRELAWQIHEELKSILVKQPDY--IKTSLITGGMDRERQIGRVKV 121
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
+V GTPGR+ D+ + + L+ +K ++DEAD+ML+ GF ++ + + LP Q
Sbjct: 122 SPQIVIGTPGRILDLFKEQALKPHFVKHYIIDEADQMLDMGFLPEVDRIAQALPEKLQMM 181
Query: 770 AYISNTTP 793
+ S T P
Sbjct: 182 VF-SATIP 188
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 113 bits (273), Expect = 4e-24
Identities = 61/160 (38%), Positives = 96/160 (60%), Gaps = 7/160 (4%)
Frame = +2
Query: 269 LLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL----DTTL 436
L I+ G+E + +Q + P ++GRD++ A++G+GKT F ++I L DT L
Sbjct: 11 LRAAIHERGYETLTEVQAAATAPELEGRDLLVSARTGSGKTVAFGLAIANELLGGEDTFL 70
Query: 437 RETQV---LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVS 607
LI++PTRELA Q+ + + L N + C+GG ++ ++ R L+ G H+V
Sbjct: 71 IRAATPLGLIIAPTRELALQVARELRWLYANTNAEIATCVGGMDMRDERRALERGAHIVV 130
Query: 608 GTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQI 727
GTPGR+ D I R T +I+ +VLDEADEML+ GF+E++
Sbjct: 131 GTPGRLVDHINRGSFDTSAIRAVVLDEADEMLDLGFREEL 170
>UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Flavobacteria|Rep: DEAD/DEAH box helicase domain
protein - Flavobacterium johnsoniae UW101
Length = 450
Score = 113 bits (273), Expect = 4e-24
Identities = 60/185 (32%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF+ L L + + GF P+ IQ++S I+ GRD++ AQ+GTGKT + + +L+
Sbjct: 3 TFEKFNLPKSLQKAVDELGFVTPTPIQEKSFSVIMSGRDMMGIAQTGTGKTFAYLLPLLK 62
Query: 419 TLDTTLRET-QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
T T ++++L PTREL Q+ + + L +M+V+ GG N+ + + G
Sbjct: 63 LYKFTHTNTPKIVVLVPTRELVVQVVEEVEKLTKYMSVKTLGIYGGVNINTQKKAVYEGV 122
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
++ GTPGR D+ V+R + LV+DE DEMLN GF+ Q+ ++ + Q +
Sbjct: 123 DILVGTPGRTMDLALDAVVRFDETQKLVIDEFDEMLNLGFRPQLTSLFAMMKTKRQNILF 182
Query: 776 ISNTT 790
+ T
Sbjct: 183 SATMT 187
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 113 bits (273), Expect = 4e-24
Identities = 65/185 (35%), Positives = 103/185 (55%), Gaps = 3/185 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
FD++GL ++++ + G+ P+ IQ +I +++ +DV+ AQ+GTGKTA+F + +L
Sbjct: 8 FDNLGLSAKVIKAVQLAGYTAPTPIQSETIPHVLQHKDVLGIAQTGTGKTASFVLPMLTL 67
Query: 422 LD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 592
L+ R + LIL PTRELA Q+++ G + IGG + RKL+ G
Sbjct: 68 LEKGRAKARMPRTLILEPTRELAAQVKENFDKYGINHRLNVALLIGGVSFDHQDRKLERG 127
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCA 772
V+ TPGR+ D R L +++LV+DEAD ML+ GF I + + L P T+
Sbjct: 128 ADVLIATPGRLLDHFERGTLLLMGVEILVIDEADRMLDMGFIPDIERICK-LTPFTRQTL 186
Query: 773 YISNT 787
+ S T
Sbjct: 187 FFSAT 191
>UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 868
Score = 113 bits (273), Expect = 4e-24
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 3/188 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF S G +LL I G+ P+ IQ++ I+ GRDV+A A++G+GKTA F + +++
Sbjct: 5 TFQSFGFSPKLLESIKIIGYSLPTPIQRKCFPSILAGRDVVAMARTGSGKTAGFVLPMIE 64
Query: 419 TLDTTLRET---QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
L + + + ++LSPTRELA Q +V+ L N+ A GG++L L
Sbjct: 65 RLGCSHSQIVGIRGVVLSPTRELALQTYRVVRKLACKTNLVVCALTGGSSLDRQFESLSG 124
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
+V TPGR+F I L ++K+++LDEAD + G QI + +P Q C
Sbjct: 125 NPDIVVATPGRLFHHIIEAGLSLIAVKIIILDEADRLFEMGLASQIEKILESIPKNRQ-C 183
Query: 770 AYISNTTP 793
+S T P
Sbjct: 184 VLVSATMP 191
>UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG425
homolog; n=4; Mycoplasma|Rep: Probable ATP-dependent RNA
helicase MG425 homolog - Mycoplasma pneumoniae
Length = 450
Score = 113 bits (273), Expect = 4e-24
Identities = 56/181 (30%), Positives = 106/181 (58%), Gaps = 2/181 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF+ +G+ L+ + +P+ IQQ +I ++ +++I + +GTGKTA F I +++
Sbjct: 4 TFNELGVSPALIATLKDNNINQPTTIQQLAIPQFLQHQNLIVHSPTGTGKTAVFGIPVIE 63
Query: 419 TL--DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 592
TL + TQ L+++PTRELA QI+ + +++ + IGG + + +++L+
Sbjct: 64 TLLKKPSKGTTQTLVVAPTRELAEQIKTTFINFAKHTHLKVVSLIGGIPIWQQLKQLENQ 123
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCA 772
+V GT GRV D++ R V++ ++ L++DE D ML++GFK +++D+ + Q
Sbjct: 124 PEIVVGTMGRVMDLLERGVIKFEHLEHLIIDEVDLMLDRGFKRKLFDLLSRIEKFEQIAV 183
Query: 773 Y 775
Y
Sbjct: 184 Y 184
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 113 bits (273), Expect = 4e-24
Identities = 61/164 (37%), Positives = 100/164 (60%), Gaps = 2/164 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD--VIAQAQSGTGKTATFSISIL 415
F+ + L D +L I GFEKP+ IQ + ++P+ + ++AQA++G+GKTA+F+I ++
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMK-VIPLFLNDEYNIVAQARTGSGKTASFAIPLI 66
Query: 416 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
+ ++ + +IL+PTRELA Q+ I +L N++ GG + I+ L
Sbjct: 67 ELVNEN-NGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALK-NA 124
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQI 727
++V GTPGR+ D I R L +++K +LDEADEMLN GF + +
Sbjct: 125 NIVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLNMGFIKDV 168
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 113 bits (273), Expect = 4e-24
Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 2/186 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F +MGL LLR I GF P+ IQ+++I +++ RDV+ A++G+GKTA F I +++
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIER 147
Query: 422 LDTTLRET--QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
L + +I+SP+RELA Q KV+ LG +++ +GG +L E +
Sbjct: 148 LKAHSARVGARAIIMSPSRELALQTLKVVKELGKGTDLKTVLLVGGDSLEEQFGLMAANP 207
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAY 775
++ TPGR + L S++ +V DEAD + GF Q+ ++ LPP+ Q +
Sbjct: 208 DIIIATPGRFLHLKVEMSLNLSSVRYVVFDEADRLFEMGFAAQLTEILHALPPSRQTLLF 267
Query: 776 ISNTTP 793
S T P
Sbjct: 268 -SATLP 272
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 113 bits (272), Expect = 5e-24
Identities = 66/175 (37%), Positives = 98/175 (56%), Gaps = 5/175 (2%)
Frame = +2
Query: 293 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQ-----VLI 457
G+E P+ IQ +I I++G D++ AQ+GTGKTA FS+ ILQ L R+ + LI
Sbjct: 23 GYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQNLSKHTRKIEPKSPRCLI 82
Query: 458 LSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMI 637
L+PTRELA QI + I A +N++ GG +R L G ++ TPGR+ D+
Sbjct: 83 LTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVRALQGGVDILIATPGRLMDLH 142
Query: 638 RRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYISNTTP*DI 802
++ L+ +++ VLDEAD ML+ GF + I + LP + S T P +I
Sbjct: 143 GQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLPQKRHN-LFFSATMPHEI 196
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 113 bits (272), Expect = 5e-24
Identities = 57/170 (33%), Positives = 97/170 (57%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F L +E+++ + + +P+ IQ++ I ++G+D+IA++++G+GKTA F+I I ++
Sbjct: 6 FTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICES 65
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 601
+ Q L+L PTRELA Q++ I +G V+ GG + L H+
Sbjct: 66 IVWEENLPQALVLEPTRELAYQVKDEIFNVGRMKRVKVPVVFGGFPFDKQALTLKQKSHI 125
Query: 602 VSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 751
V GTPGRV D L+ ++K +++DEAD ML+ GF + + + YLP
Sbjct: 126 VVGTPGRVLDHCETGTLKCSNVKYVIIDEADLMLDMGFLDDVKRILSYLP 175
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 113 bits (272), Expect = 5e-24
Identities = 64/178 (35%), Positives = 102/178 (57%), Gaps = 1/178 (0%)
Frame = +2
Query: 218 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 397
E V + + +GL E+++ I G+ + + +Q +I ++ +DVIA+A +GTGKT
Sbjct: 6 EQVNEVVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFA 65
Query: 398 FSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACI-GGTNLGEDI 574
F I +++ +D Q L+L+PTRELA QIQ + L +F C+ GG + + I
Sbjct: 66 FGIPMVEHIDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQI 125
Query: 575 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYL 748
L +V TPGR+ D ++RR ++ ++ +VLDEAD ML+ GF I+DV R L
Sbjct: 126 TTLKKHPQIVVATPGRLMDHMKRRTVKLDKVETVVLDEADRMLDMGF---IHDVTRIL 180
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 113 bits (272), Expect = 5e-24
Identities = 61/172 (35%), Positives = 102/172 (59%), Gaps = 3/172 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
FD++GL +L I G+ + + +QQ+ I ++G+D++A AQ+GTGKTA+F++ +L+
Sbjct: 24 FDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLEQ 83
Query: 422 LDTTLRET---QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 592
L + + L+++PTRELA Q+ I F+ ++ A GG N+ + ++ G
Sbjct: 84 LSKQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQG 143
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYL 748
++ TPGR+FD+I + L S+ LV+DEAD ML+ GF I V R +
Sbjct: 144 VDILVATPGRLFDIIGQFHLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLI 195
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 113 bits (272), Expect = 5e-24
Identities = 61/179 (34%), Positives = 102/179 (56%), Gaps = 4/179 (2%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
++ + L +L R + G++ P+ +Q++ I ++ GRD + A +G+GKT F I +L+
Sbjct: 2 SWQGLSLSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLLE 61
Query: 419 TLDTTLRETQ---VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
+ R+T LILSPTRELA Q V+ L F N + + IGGT+ + +L
Sbjct: 62 RMILRGRDTYGTTALILSPTRELAAQTAAVLQELAYFTNFRVYLLIGGTDTAKQAAQLRT 121
Query: 590 GQHVVSGTPGRVFDMIRRRV-LRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
++ TPGR+ D++R V +I++LVLDE D+ML+ GF +++ ++ P A Q
Sbjct: 122 EPDIIVATPGRLIDLVRNTVNFSLDTIEVLVLDEGDKMLDIGFHDELKEICALCPVARQ 180
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 113 bits (272), Expect = 5e-24
Identities = 70/191 (36%), Positives = 112/191 (58%), Gaps = 6/191 (3%)
Frame = +2
Query: 209 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG---RDVIAQAQSG 379
D S + + TF+ + L++ELL+GIY GF +PS IQ+ + LP++ +++IAQ+QSG
Sbjct: 88 DPSSPLYSVKTFEELRLKEELLKGIYAMGFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSG 146
Query: 380 TGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGT 556
TGKTA F +++L ++ Q L L+PT ELA Q +V+ +G F ++VQ I G
Sbjct: 147 TGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGN 206
Query: 557 NLGEDIRKLDYGQHVVSGTPGRVFD-MIRRRVLRTRSIKMLVLDEADEMLN-KGFKEQIY 730
+ R D + ++ GTPG V D + +++ I++ VLDEAD M++ +GF +
Sbjct: 207 RIP---RGTDITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSI 263
Query: 731 DVYRYLPPATQ 763
+ R LP Q
Sbjct: 264 RIQRALPSECQ 274
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 113 bits (271), Expect = 7e-24
Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 2/190 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F MGL L + + F P+ +Q ++I +KG+D++ AQ+GTGKT F+I ++
Sbjct: 3 SFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLIA 62
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVI--LALGDFMNVQCHACIGGTNLGEDIRKLDYG 592
L + L++ PTRELA Q+ I L L + + ++ IGG + + +L
Sbjct: 63 KLLGEPNASTALVIVPTRELAQQVTNEIGKLLLKNSV-LKIALLIGGEPIFRQLNQLQRR 121
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCA 772
+V GTPGR+ D I R+ L T ++ LVLDE D M + GF QI + +YLP Q
Sbjct: 122 PRIVIGTPGRIIDHIERKTLITNNVSTLVLDEVDRMFDMGFGIQIEGIMKYLPKMRQNLM 181
Query: 773 YISNTTP*DI 802
+ S T P DI
Sbjct: 182 F-SATLPGDI 190
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 113 bits (271), Expect = 7e-24
Identities = 61/192 (31%), Positives = 107/192 (55%), Gaps = 5/192 (2%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F + L + ++ + G+++P+ IQ+ I ++ G D++ AQ+GTGKTA FS+ I+
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Query: 422 -----LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
+D + T+ LIL+PTRELA+QI + I D + ++ GG + ++
Sbjct: 64 FGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIE 123
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
G ++ TPGR+ D+I + +++++ VLDEAD ML+ GF + + + LP + Q
Sbjct: 124 LGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQT 183
Query: 767 CAYISNTTP*DI 802
+ S T P +I
Sbjct: 184 LLF-SATMPAEI 194
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 113 bits (271), Expect = 7e-24
Identities = 66/159 (41%), Positives = 96/159 (60%), Gaps = 2/159 (1%)
Frame = +2
Query: 332 LPI-VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILA 508
+P+ ++GRD + QA++GTGKTA F + IL +L + LIL+PTRELA QI+
Sbjct: 3 IPVALQGRDCLIQAKTGTGKTAAFGLPILNSLK---EGEKALILAPTRELALQIRDNFRD 59
Query: 509 LGDFMNVQCHACIGGTNLGEDIRKLDYGQ-HVVSGTPGRVFDMIRRRVLRTRSIKMLVLD 685
++NV+ A GGT + D++ L G+ VV GTPGR+ D+I R L+T ++ VLD
Sbjct: 60 FARYLNVRTFAFYGGTKVFGDLKVLRGGKVDVVIGTPGRIKDLIERGALKTDDVRYFVLD 119
Query: 686 EADEMLNKGFKEQIYDVYRYLPPATQGCAYISNTTP*DI 802
E D ML+ FKE I +Y LP Q ++S T P ++
Sbjct: 120 EVDVMLDMNFKEDIDFIYSQLPEEKQ-VFFVSATFPKEV 157
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 113 bits (271), Expect = 7e-24
Identities = 59/163 (36%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F +GL E+++ + G+ P+ IQ ++I ++ +D++ AQ+GTGKTA F++ ++Q
Sbjct: 105 FSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAFALPLIQQ 164
Query: 422 LDTTL-----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
L R + +ILSPTRELA QI + ++ G + + IGG + + +R L
Sbjct: 165 LLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQMRDLS 224
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGF 715
G ++ TPGR+ D++ ++ LR K LVLDEAD+ML+ GF
Sbjct: 225 KGVDILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGF 267
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 113 bits (271), Expect = 7e-24
Identities = 61/175 (34%), Positives = 98/175 (56%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F +G+ D +LR I FE+P+ IQ+ +I I++G+D+I A +G+GKT F I+Q
Sbjct: 3 SFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQ 62
Query: 419 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 598
++ + L+L+PTRELA Q+Q + ++ GG + IR+L+
Sbjct: 63 KIEKG-NGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQLERAD- 120
Query: 599 VVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
VV TPGR+ D I R + +++LVLDEAD ML+ GF + + ++ P Q
Sbjct: 121 VVVATPGRLLDHIERGTIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSDRQ 175
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 112 bits (270), Expect = 9e-24
Identities = 77/218 (35%), Positives = 115/218 (52%), Gaps = 16/218 (7%)
Frame = +2
Query: 197 NVEFDTS-EDVEV-IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 370
++E TS EDV I +FD LR L I G+ KP+ +Q+ I ++ GRD++A A
Sbjct: 287 SIEVKTSGEDVPPPISSFDEANLRVLLNTNIKKSGYTKPTPVQKYGIPILLSGRDLMACA 346
Query: 371 QSGTGKTATFSISILQTL---DTTLR--------ETQVLILSPTRELATQIQKVILALGD 517
Q+G+GKTA F I I+ TL D L E + LI+SPTREL QI
Sbjct: 347 QTGSGKTAAFLIPIIHTLLAKDRDLSDMSSANQVEPRALIISPTRELTIQIFDEARKFSK 406
Query: 518 FMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADE 697
++CH GGT+ ++++ G ++ TPGR+ D++ + + +I+ +VLDEAD
Sbjct: 407 DSVLKCHIIYGGTSTSHQMKQIFQGVDILVATPGRLLDLVGKGKITFDAIEFVVLDEADR 466
Query: 698 MLNKGFKEQIYDVYRY---LPPATQGCAYISNTTP*DI 802
ML+ GF + V R+ PP + S T P +I
Sbjct: 467 MLDMGFLPDVEKVLRHDTMKPPGERQTLMFSATFPQEI 504
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 112 bits (270), Expect = 9e-24
Identities = 71/204 (34%), Positives = 104/204 (50%), Gaps = 10/204 (4%)
Frame = +2
Query: 212 TSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKT 391
T V V +F +G+R+++ + + G P IQ SI V+G D+I QA++GTGKT
Sbjct: 45 TETTVSVPTSFADLGVREDICQALEGVGIVSPFPIQAMSIPIAVEGTDLIGQARTGTGKT 104
Query: 392 ATFSISILQTLD----------TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHA 541
F I+IL + TT + Q L++ PTRELA Q+ K I +
Sbjct: 105 LAFGITILLRITLPGDEGWEELTTKGKPQALVMCPTRELALQVSKDISTAASVRGARVLT 164
Query: 542 CIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKE 721
GG I L G VV GTPGR+ D+ +R+ L ++++VLDEADEML+ GF
Sbjct: 165 VYGGVGYESQIDALKAGVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEMLDLGFLP 224
Query: 722 QIYDVYRYLPPATQGCAYISNTTP 793
+ ++ P + Q + S T P
Sbjct: 225 DVENLIGRTPASRQTMLF-SATMP 247
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 112 bits (270), Expect = 9e-24
Identities = 62/175 (35%), Positives = 99/175 (56%), Gaps = 5/175 (2%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F + L LLR + G+ KP+ IQ +SI +++GRD++ AQ+GTGKTA+F++ +L
Sbjct: 9 FADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLLHR 68
Query: 422 LDTTLRET-----QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 586
L T R +VL+L+PTREL +QI + V+ GG + ++ L+
Sbjct: 69 LAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVHQVKALE 128
Query: 587 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 751
G ++ PGR+ D+I + + ++ LVLDEAD+ML+ GF + I + LP
Sbjct: 129 EGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLDMGFAKPIERIVATLP 183
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 112 bits (270), Expect = 9e-24
Identities = 61/176 (34%), Positives = 99/176 (56%), Gaps = 2/176 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F +MGL +L+ I G++ P+ IQ+++I I++GRDV+A A++G+GKT F I + +
Sbjct: 40 FQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTGCFLIPLFEK 99
Query: 422 LDTTLRET--QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 595
L ++ + L+L+PTRELA Q K I LG F +++ +GG ++ +
Sbjct: 100 LKQREIKSGARALVLTPTRELAIQTFKFIKQLGKFTDLKTILVLGGDSMDSQFAAIHTLP 159
Query: 596 HVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
++ TPGR + L+ S++ V DEAD + GF EQ+ + R LP A Q
Sbjct: 160 DIIVATPGRFLHLCVEMDLKLSSVQYCVFDEADRLFEMGFGEQLTETLRRLPEARQ 215
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 112 bits (270), Expect = 9e-24
Identities = 65/187 (34%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Frame = +2
Query: 242 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 421
F+ L+ ++ ++ GF +P+ IQ+R I ++K VI Q+Q+GTGKT + + +L
Sbjct: 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNK 65
Query: 422 LDTTLRETQVLILSPTRELATQIQKVILAL---GDFMNVQCHACIGGTNLGEDIRKLDYG 592
+D QV+I +PTRELA QI + L + + ++ IGGT+ + I KL
Sbjct: 66 IDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQ 125
Query: 593 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCA 772
H+V GTPGR+ D+I+ + L + LV+DEAD ML+ GF + + +P Q
Sbjct: 126 PHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGFLADVDYIGSRMPEDLQMLV 185
Query: 773 YISNTTP 793
+ S T P
Sbjct: 186 F-SATIP 191
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 112 bits (270), Expect = 9e-24
Identities = 66/173 (38%), Positives = 95/173 (54%), Gaps = 4/173 (2%)
Frame = +2
Query: 257 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 436
L+ E+LR I GFE PS +Q I V G D++ QA+SG GKTA F ++ LQ L+ +
Sbjct: 48 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSD 107
Query: 437 RET-QVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG-QHVVS 607
T VL++ TRELA QI K +M V+ GG + +D L G H+V
Sbjct: 108 NNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVV 167
Query: 608 GTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQ 763
GTPGR+ +IR + L + +K VLDE D+ML + + + +++R P Q
Sbjct: 168 GTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQ 220
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 112 bits (270), Expect = 9e-24
Identities = 77/217 (35%), Positives = 114/217 (52%), Gaps = 27/217 (12%)
Frame = +2
Query: 194 SNVEFDTSEDVEV----------IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV 343
+ + FD ED+ V I +FD + L + + + ++KP+ +Q+ +I I+
Sbjct: 271 TGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIII 330
Query: 344 KGRDVIAQAQSGTGKTATFSISIL------------QTLDTTLRETQV---LILSPTREL 478
GRD++A AQ+G+GKTA F + IL Q+ R Q L+L+PTREL
Sbjct: 331 NGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTREL 390
Query: 479 ATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRT 658
ATQI + ++ GG N E +R+LD G H++ TPGR+ DMI R +
Sbjct: 391 ATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGL 450
Query: 659 RSIKMLVLDEADEMLNKGFKEQIYDVYRYL--PPATQ 763
+I+ LVLDEAD ML+ GF+ QI + L PP Q
Sbjct: 451 ENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQ 487
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 112 bits (269), Expect = 1e-23
Identities = 60/170 (35%), Positives = 96/170 (56%), Gaps = 3/170 (1%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
+F + L +L+ I G+++P+ IQ +SI I+ + V+A AQ+GTGKTA F + IL
Sbjct: 2 SFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPILD 61
Query: 419 TLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
L E +VLI+SPTRELATQI I ++ + GG + G R
Sbjct: 62 KLTKNRSEGRGPRVLIVSPTRELATQITDSIKKYSRYLRINSITITGGISYGLQNRMFSK 121
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVY 739
++ TPGR+ D+ +++ + + +++++LDEAD ML+ GF I +Y
Sbjct: 122 PIDILVATPGRLLDLYQQKKINFKGLEVMILDEADRMLDMGFVPDIRKIY 171
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 112 bits (269), Expect = 1e-23
Identities = 74/222 (33%), Positives = 120/222 (54%), Gaps = 9/222 (4%)
Frame = +2
Query: 128 N*IRKMTSSEVSSNR-KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEK 304
N I+ ++++ N +I+ E+L N+ + +E ++ + +D M + D+LL I +E
Sbjct: 141 NKIKTKPLNQMNENDWRIIRENL-NIFVNNNEVIKPLRKWDDMNVCDDLLLLIKNI-YEN 198
Query: 305 PSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ--------TLDTTLRETQVLIL 460
P+ IQ SI +K RD+IA A++GTGKT + I ++Q T +T+ L+L
Sbjct: 199 PTPIQCASIPIALKMRDLIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVL 258
Query: 461 SPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIR 640
+PTRELA QIQK L L ++ CIGG + I +L G +V PGR+ D++
Sbjct: 259 APTRELALQIQKETLKLATPFGLRVCCCIGGEPMQPQIEELSNGAEIVVAAPGRLKDLLN 318
Query: 641 RRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQG 766
+ L +VLDEAD+M++ G Q+ ++ LP G
Sbjct: 319 QSYLVLGQCYFVVLDEADKMIDLGLDVQVRYIFSELPSVKDG 360
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 112 bits (269), Expect = 1e-23
Identities = 62/188 (32%), Positives = 102/188 (54%), Gaps = 2/188 (1%)
Frame = +2
Query: 236 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 415
P F+ +GL LL + G ++PS IQ ++I P+++G+DV+ +Q+G+GKTA F + +L
Sbjct: 20 PGFEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGKTAAFVLPML 79
Query: 416 QTLDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 589
Q L + LIL PTRELA Q V LG ++++ GGT+ + ++ +
Sbjct: 80 QKLTEAGPAPGPRALILEPTRELAAQTAAVCRQLGRRLSLKTRVICGGTSREQQVQSVSD 139
Query: 590 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGC 769
G ++ T GR+ D++ + L + LVLDEAD +L++ F + + Y P
Sbjct: 140 GVDIIVATHGRLLDLVMQADLVLEHLTYLVLDEADRLLDEDFSASMTALTPYFPDQPPQT 199
Query: 770 AYISNTTP 793
+ S T P
Sbjct: 200 VFCSATLP 207
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 112 bits (269), Expect = 1e-23
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 8/193 (4%)
Frame = +2
Query: 239 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 418
TF L ++ + I G+ +P+ IQ ++I ++ G DV+ AQ+GTGKTA FS+ IL
Sbjct: 21 TFADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILN 80
Query: 419 TLDTTLRET--------QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 574
L E + LIL+PTRELA Q+ + F ++ GG ++ I
Sbjct: 81 RLMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINPQI 140
Query: 575 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 754
+ L G +V TPGR+ D ++++ + +++LVLDEAD ML+ GF + + LP
Sbjct: 141 QTLRRGVELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLDMGFLPDLQRIINLLPK 200
Query: 755 ATQGCAYISNTTP 793
Q + + +P
Sbjct: 201 TRQNLLFSATFSP 213
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 112 bits (269), Expect = 1e-23
Identities = 69/203 (33%), Positives = 103/203 (50%), Gaps = 24/203 (11%)
Frame = +2
Query: 227 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 406
E +P FD +GL DE+LR I G+ P+ +Q SI +++GRD++A AQ+GTGKTA F +
Sbjct: 43 ENLPAFDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQTGTGKTAAFLL 102
Query: 407 SILQTLD-----TTLRETQ-------------------VLILSPTRELATQIQKVILALG 514
+ L+ +RE +L+++PTRELA QI +V +
Sbjct: 103 PTMNNLEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPVMLVITPTRELAQQIDEVAGKIA 162
Query: 515 DFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEAD 694
D +GG + L YG ++ TPGR+ D+I + +K+LVLDEAD
Sbjct: 163 DVTGHVAVTVVGGVSYKPQTAALKYGCDILVATPGRLVDLIEQGACHLDEVKVLVLDEAD 222
Query: 695 EMLNKGFKEQIYDVYRYLPPATQ 763
ML+ GF + + R P Q
Sbjct: 223 RMLDMGFLPAVRRIVRETPAERQ 245
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 112 bits (269), Expect = 1e-23
Identities = 70/210 (33%), Positives = 110/210 (52%), Gaps = 14/210 (6%)
Frame = +2
Query: 176 ILSEDLSNVE-FDTSEDVEV----IPT----FDSMGLRDELLRGIYTYGFEKPSAIQQRS 328
+L+ + E F TS ++ + +PT F+ G D ++ I GF KP+AIQ +
Sbjct: 128 VLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQG 187
Query: 329 ILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQ-----VLILSPTRELATQIQ 493
+ GRD++ AQ+G+GKT + + + ++ R + L+L+PTRELA QIQ
Sbjct: 188 WPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQ 247
Query: 494 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKM 673
+V + G +V+ GG G+ R L+ G +V TPGR+ D + R +
Sbjct: 248 QVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTY 307
Query: 674 LVLDEADEMLNKGFKEQIYDVYRYLPPATQ 763
LVLDEAD ML+ GF+ QI + + + P Q
Sbjct: 308 LVLDEADRMLDMGFEPQIRKIMQQIRPDRQ 337
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 111 bits (268), Expect = 2e-23
Identities = 58/185 (31%), Positives = 106/185 (57%), Gaps = 1/185 (0%)
Frame = +2
Query: 251 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDT 430
M + + L + + F +P+ IQ+++I ++ G+DVI ++++G+GKTA + + +L +++
Sbjct: 1 MDISENLKKSLGLMKFTEPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNSVEK 60
Query: 431 TL-RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVS 607
+ + +I+ PTRELA Q +V LG ++ GG ++ + +L G +V
Sbjct: 61 LKGKSVKAIIILPTRELALQTHRVASRLGKISGIKSTIVYGGASIIRQVEELP-GSDIVI 119
Query: 608 GTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQGCAYISNT 787
GTPGR+ D+ ++ L+ +K LVLDEAD ML+ GF + I + + P Q +S T
Sbjct: 120 GTPGRILDLYNQKYLKLDHVKYLVLDEADLMLDMGFIDDIKKIISFTPEGRQ-TILLSAT 178
Query: 788 TP*DI 802
P ++
Sbjct: 179 LPAEV 183
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 111 bits (268), Expect = 2e-23
Identities = 67/195 (34%), Positives = 118/195 (60%), Gaps = 6/195 (3%)
Frame = +2
Query: 182 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--- 352
S + ++ D S + + +F+ + L+ ELL+G+Y GF +PS IQ+ + LP++ +
Sbjct: 20 SNQVEVLQRDPSSPLYSVKSFEELRLKPELLKGVYQMGFNRPSRIQENA-LPLMMAQPAQ 78
Query: 353 DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNV 529
++IAQ+QSGTGKTA F +++L ++ + Q L ++PT ELA QI +V+ +G F +V
Sbjct: 79 NLIAQSQSGTGKTAAFCLAMLGIVNPADKWPQCLCIAPTYELALQIGQVLEQMGRFCADV 138
Query: 530 QCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFD-MIRRRVLRTRSIKMLVLDEADEMLN 706
+ + G + +R + +V GTPG V+D +++VL + I M VLDEAD M++
Sbjct: 139 RLVYAVRGNRI---VRGTKVQEQIVVGTPGTVYDWCAKQKVLDPKKITMFVLDEADVMIS 195
Query: 707 -KGFKEQIYDVYRYL 748
+G ++Q + R++
Sbjct: 196 MQGHRDQSIRIQRWV 210
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,161,793
Number of Sequences: 1657284
Number of extensions: 15834842
Number of successful extensions: 48163
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 44522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46756
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72553824147
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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