Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_H12
(764 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1324 - 25825153-25825197,25825705-25825785,25825907-258259... 171 5e-43
02_05_0942 + 32970537-32970581,32971059-32971113,32971300-329714... 155 5e-38
04_01_0026 - 354855-354876,355184-355248,355710-355817,356215-35... 152 3e-37
06_01_0718 + 5233030-5233062,5233329-5233383,5233543-5233660,523... 150 1e-36
08_01_0066 - 455589-455687,455902-455976,456531-456677,457158-45... 143 2e-34
06_01_0067 + 561910-561987,562698-562759,564293-564338,564701-56... 100 1e-27
08_02_0034 - 11435678-11435702,11435787-11435816,11436364-114365... 99 4e-21
11_03_0227 + 11934530-11934638,11937206-11937351,11937492-119376... 88 8e-18
03_01_0215 + 1696250-1696573,1697653-1697793,1698267-1698539,169... 81 1e-15
12_01_0813 + 7475591-7475693,7476972-7477117,7477205-7477324,747... 78 7e-15
04_04_1543 - 34270578-34270718,34271069-34271341,34271782-342719... 77 2e-14
08_01_0130 + 1040696-1041049,1042135-1042275,1042422-1042673,104... 55 5e-08
07_03_0057 + 12872946-12873152,12873371-12873421,12876335-128764... 35 0.062
11_03_0215 + 11809068-11809300,11809872-11809964,11810976-118111... 32 0.58
09_02_0580 + 10884012-10884081,10884173-10884419,10884472-108847... 30 1.8
05_05_0081 + 22248963-22249016,22249120-22249165,22249259-222493... 30 1.8
11_08_0091 - 28303446-28303732,28303825-28304297,28304383-283045... 29 3.1
01_05_0027 - 17331888-17331968,17332236-17332806,17333190-173333... 29 3.1
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 29 4.1
06_01_1150 + 9720227-9720858,9720948-9721118,9721199-9721403 29 5.4
06_01_0011 + 162301-163218,163349-163987 29 5.4
05_06_0027 - 25029725-25030017,25030097-25030211,25030347-250305... 29 5.4
05_03_0047 + 7793337-7793969 29 5.4
08_02_1359 + 26382605-26382815,26382907-26382998,26383722-263837... 28 7.1
06_03_0933 + 26067109-26067232,26067334-26067486,26068929-260692... 28 7.1
06_01_0785 - 5873244-5873357,5873458-5873562,5874333-5874424,587... 28 7.1
12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,730... 28 9.4
07_03_0676 + 20618677-20618840,20618938-20619502 28 9.4
07_01_0353 + 2563807-2564496,2564595-2564660,2564853-2564918,256... 28 9.4
>07_03_1324 -
25825153-25825197,25825705-25825785,25825907-25825967,
25826005-25826060,25826171-25826239,25826366-25826473,
25826555-25826635,25826795-25826951,25827060-25827177,
25827285-25827339,25827779-25827814
Length = 288
Score = 171 bits (416), Expect = 5e-43
Identities = 85/188 (45%), Positives = 131/188 (69%), Gaps = 4/188 (2%)
Frame = +2
Query: 113 KKPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGEL 292
K +V+VLGGPGSGKGTQC IV +GFTHLS GDLLRAE+KSGSE + +++ G++
Sbjct: 23 KVTVVFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGKI 82
Query: 293 VPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIAPVS--VIIYFEASSET 466
VP+E+ + LL++A++ E+ FLIDG+PR + AF EN+ +S +++F+ S E
Sbjct: 83 VPSEVTIKLLQDAMI--KNENDKFLIDGFPRNEENRAAF-ENVTKISPAFVLFFDCSEEE 139
Query: 467 LTQRLLGRAASSGRADDNEETIKLRLKTFLDNNDLVLAQY--PDKLRRINAERPVDEIFA 640
+ +RLLGR + GR DDN ETI+ R K F++++ V+ Y +K+++I+A +P+ E+F
Sbjct: 140 MERRLLGR--NQGRVDDNIETIRKRFKVFVESSLPVIEHYNAKNKVKKIDAAKPISEVFE 197
Query: 641 EVQSILDP 664
+V++I P
Sbjct: 198 DVKAIFAP 205
>02_05_0942 +
32970537-32970581,32971059-32971113,32971300-32971417,
32971567-32971615,32971637-32971723,32971890-32971970,
32972074-32972181,32972432-32972503,32973218-32973250
Length = 215
Score = 155 bits (375), Expect = 5e-38
Identities = 83/188 (44%), Positives = 123/188 (65%), Gaps = 4/188 (2%)
Frame = +2
Query: 113 KKPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGEL 292
K +V+VLGGPGSGKGTQC IV +GF HLS GDLLRAE+KSGSE + +++ G++
Sbjct: 26 KVTVVFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIENMIKEGKI 85
Query: 293 VPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEE--NIAPVSVIIYFEASSET 466
VP+E EA++ + FLIDG+PR + AFE I P + +++F+ S E
Sbjct: 86 VPSE-------EAMIKSGNDK--FLIDGFPRNEENRAAFENVTKITP-AFVLFFDCSEEE 135
Query: 467 LTQRLLGRAASSGRADDNEETIKLRLKTFLDNNDLVLAQY--PDKLRRINAERPVDEIFA 640
+ +RLLGR + GR DDN ETI+ R K F++++ V+ Y DK+++I+A +P+ E+F
Sbjct: 136 MERRLLGR--NQGRVDDNIETIRKRFKVFVESSLPVIEYYNAKDKVKKIDAAKPIPEVFE 193
Query: 641 EVQSILDP 664
+V++I P
Sbjct: 194 DVKAIFAP 201
>04_01_0026 -
354855-354876,355184-355248,355710-355817,356215-356295,
356729-356885,356990-357107,357485-357533,357806-357901
Length = 231
Score = 152 bits (368), Expect = 3e-37
Identities = 82/192 (42%), Positives = 122/192 (63%), Gaps = 4/192 (2%)
Frame = +2
Query: 104 DTSKKP-IVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIME 280
D + KP I +VLGGPGSGKGTQC +I + +GF HLS GDLLR+E+ +G E+ + + I++
Sbjct: 37 DGATKPFIAFVLGGPGSGKGTQCVRIASDFGFAHLSAGDLLRSEISTGGEKGELILNIIK 96
Query: 281 RGELVPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEE-NIAPVSVIIYFEAS 457
G++VP+EI ++L+++A+ + ++K LIDG+PR + IAFE ++I+F+
Sbjct: 97 EGKIVPSEITVELIRKAM--ESSDAKRVLIDGFPRCEENRIAFERITGTEPDLVIFFDCP 154
Query: 458 SETLTQRLLGRAASSGRADDNEETIKLRLKTFLDNNDLVLAQYPD--KLRRINAERPVDE 631
+ + +RLLGR + GR DDN ETIK RLK F N V+ Y K+ +INA +E
Sbjct: 155 EDEMVKRLLGR--NQGRVDDNIETIKKRLKVFESLNIPVVDYYTSRGKVHKINATGTEEE 212
Query: 632 IFAEVQSILDPL 667
IF V + L
Sbjct: 213 IFGAVHKLFSSL 224
>06_01_0718 +
5233030-5233062,5233329-5233383,5233543-5233660,
5233746-5233902,5234033-5234113,5234213-5234320,
5234448-5234483
Length = 195
Score = 150 bits (364), Expect = 1e-36
Identities = 75/163 (46%), Positives = 110/163 (67%), Gaps = 2/163 (1%)
Frame = +2
Query: 113 KKPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGEL 292
K I++VLGGPGSGKGTQC IV +GF HLS G+LLRAE+ SGSE + I+ G++
Sbjct: 22 KVKIIFVLGGPGSGKGTQCSNIVEHFGFIHLSAGELLRAEINSGSENGTMIDTIITEGKI 81
Query: 293 VPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEE--NIAPVSVIIYFEASSET 466
VP+EI + LL+EAI+ + ++IDG+PR + + FE +I+P +++F+ S E
Sbjct: 82 VPSEITIKLLQEAIIKGGNDK--YIIDGFPRNEENRVVFESVISISP-EFVLFFDCSEEE 138
Query: 467 LTQRLLGRAASSGRADDNEETIKLRLKTFLDNNDLVLAQYPDK 595
+ +RLLGR + GR+DDN ETI+ RLK F++++ V+ Y K
Sbjct: 139 MERRLLGR--NQGRSDDNIETIRKRLKVFVESSLPVIEYYESK 179
>08_01_0066 -
455589-455687,455902-455976,456531-456677,457158-457292,
457380-457508,457719-457814,458212-458403
Length = 290
Score = 143 bits (346), Expect = 2e-34
Identities = 88/242 (36%), Positives = 131/242 (54%), Gaps = 24/242 (9%)
Frame = +2
Query: 5 RSADRAGNTRS*TEITKLSHTTSVLIL*KMAPIDTSKKPIVWVLGGPGSGKGTQCDKIVA 184
+SA R G + + + L V++ K P+ V + G P SGKGTQC+ I +
Sbjct: 42 QSARRCGISPATRKPRSLPRAAKVVVAVKADPLK------VMIAGAPASGKGTQCELIKS 95
Query: 185 KYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNEIVLDLLKEAILARAEESKGF 364
KYG H+S GDLLRAE+ +GSE K ME+G+LVP+EIV++++KE +L + KG+
Sbjct: 96 KYGLVHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDEIVVNMVKERLLQPDAQEKGW 155
Query: 365 LIDGYPREKSQGIAFEE-NIAPVSVIIYFEASSETLTQRLLGR----------------- 490
L+DGYPR SQ +A E NI P + I + E L +R++GR
Sbjct: 156 LLDGYPRSYSQAMALETLNIRP-DIFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPP 214
Query: 491 ------AASSGRADDNEETIKLRLKTFLDNNDLVLAQYPDKLRRINAERPVDEIFAEVQS 652
+ + R DD EE +KLRL+T N + +L+ Y D + + + VD++FAE+
Sbjct: 215 ENEEIASRLTQRFDDTEEKVKLRLQTHYQNVESLLSIYEDVIVEVKGDALVDDVFAEIDK 274
Query: 653 IL 658
L
Sbjct: 275 QL 276
>06_01_0067 +
561910-561987,562698-562759,564293-564338,564701-564758,
564892-565009,565130-565286,565611-565718,565884-565955,
566058-566174,566309-566404
Length = 303
Score = 100 bits (239), Expect(2) = 1e-27
Identities = 49/105 (46%), Positives = 70/105 (66%)
Frame = +2
Query: 98 PIDTSKKPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIM 277
P K IV+V+GGPGSGKGTQC KIV ++GFTHLS GDLLR E K +E+ + +M
Sbjct: 69 PPPGKKITIVFVIGGPGSGKGTQCAKIVKQFGFTHLSAGDLLREEAKYDTEQGTMIKNLM 128
Query: 278 ERGELVPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFE 412
G+LV +++++ LL +A+ R + FL+DG+PR + A+E
Sbjct: 129 NEGKLVSSDLIVKLLFKAM--RESGNDKFLVDGFPRNEENRHAYE 171
Score = 41.1 bits (92), Expect(2) = 1e-27
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +2
Query: 503 GRADDNEETIKLRLKTFLDNNDLVLAQYPD--KLRRINAERPVDEIFAEVQSILDPL 667
GR DDN +TI+ R F V+ Y KLR+++ R VDE+F +V++I L
Sbjct: 174 GRDDDNIDTIRRRFDVFQQQTLPVIQYYEKRGKLRKVDGNRQVDEVFEDVKAIFAQL 230
>08_02_0034 -
11435678-11435702,11435787-11435816,11436364-11436501,
11436646-11436755,11436838-11436867,11437948-11437993,
11438453-11438622,11439156-11439221,11439299-11439378,
11440704-11440842,11440933-11441013,11441112-11441147,
11441414-11441539,11442084-11442179,11443615-11443689,
11444288-11444434,11445155-11445229,11445485-11445619,
11445706-11445834,11446161-11446292,11446395-11446598
Length = 689
Score = 98.7 bits (235), Expect = 4e-21
Identities = 48/109 (44%), Positives = 64/109 (58%)
Frame = +2
Query: 125 VWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNE 304
V + G P SGKGTQC IV KYG H+STGDLLRAEV SG+E K M+ G LVP++
Sbjct: 92 VMISGAPASGKGTQCRMIVEKYGLVHISTGDLLRAEVSSGTEIGKKAKEYMDNGMLVPDQ 151
Query: 305 IVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFE 451
+V D++ + +G+L+DGYPR +Q + E + I E
Sbjct: 152 VVTDMVVSRLSQPDVRERGWLLDGYPRSYAQAQSLESMKIRPDIFIVLE 200
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 506 RADDNEETIKLRLKTFLDNNDLVLAQYPDKLRRI 607
R+DD E +K RL T+ N++ V+ Y D L ++
Sbjct: 267 RSDDTFEKVKSRLDTYKQNSEAVIPTYSDLLNQV 300
>11_03_0227 +
11934530-11934638,11937206-11937351,11937492-11937611,
11937731-11937898,11938534-11938623,11938920-11939018
Length = 243
Score = 87.8 bits (208), Expect = 8e-18
Identities = 66/209 (31%), Positives = 103/209 (49%), Gaps = 33/209 (15%)
Frame = +2
Query: 131 VLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNEIV 310
++G PGSGKGTQ I +Y HL+TGD+LRA V + + M++GELV +++V
Sbjct: 35 LVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSDDLV 94
Query: 311 LDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENI----APVSVIIYFEASSETLTQR 478
+ ++ EA + + KGF++DG+PR Q +E + V ++ F L +R
Sbjct: 95 VGIIDEA-MKKPSCQKGFILDGFPRTVVQAQKLDEMLEKKGTKVDKVLNFAIDDSILEER 153
Query: 479 LLGR--AASSGRA-------------------------DDNEETIKLRLKTFLDNNDLVL 577
+ GR SSGR+ DD E +K RL+ F + V+
Sbjct: 154 ITGRWIHPSSGRSYHTKFAPPKVPGVDDVTGEPLIQRKDDTAEVLKSRLEAFHKQTEPVI 213
Query: 578 AQYPDK--LRRINAERPVDEIFAEVQSIL 658
Y K + ++AE+P E+ AEVQ +L
Sbjct: 214 DYYSKKALVANLHAEKPPKEVTAEVQKVL 242
>03_01_0215 +
1696250-1696573,1697653-1697793,1698267-1698539,
1698755-1698814,1698890-1699033
Length = 313
Score = 80.6 bits (190), Expect = 1e-15
Identities = 40/128 (31%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Frame = +2
Query: 113 KKPIVWV-LGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGE 289
++ + WV LG PG GKGT ++ G H++TGDL+R E+ S + L I+ +G+
Sbjct: 58 ERNVQWVFLGCPGVGKGTYASRLSRLLGVPHIATGDLVRDELASSGPLSVQLAEIVNQGK 117
Query: 290 LVPNEIVLDLLKEAILARAEESK-GFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSET 466
LV +EI+++LL + + E+ + GF++DG+PR Q + + + +++ + +
Sbjct: 118 LVSDEIIINLLSKRLKKGEEQGESGFILDGFPRTVKQA-EILDGVTDIDMVVNLKLREDV 176
Query: 467 LTQRLLGR 490
L ++ LGR
Sbjct: 177 LVEKCLGR 184
>12_01_0813 +
7475591-7475693,7476972-7477117,7477205-7477324,
7477445-7477612,7478252-7478341,7478941-7479039
Length = 241
Score = 78.2 bits (184), Expect = 7e-15
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 33/211 (15%)
Frame = +2
Query: 125 VWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNE 304
V ++G PG GKGTQ I ++ HL+TGD+LRA V + + M++GELV ++
Sbjct: 31 VILVGPPGCGKGTQSPLIKDEFCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDD 90
Query: 305 IVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIA----PVSVIIYFEASSETLT 472
+V+ ++ EA + + KGF++DG+PR Q +E +A + ++ F L
Sbjct: 91 LVVGIIDEA-MKKTSCQKGFILDGFPRTVVQAQKLDEMLAKQGTKIDKVLNFAIDDAILE 149
Query: 473 QRLLGR--AASSGRA-------------------------DDNEETIKLRLKTFLDNNDL 571
+R+ GR SSGR+ DD +K RL+ F
Sbjct: 150 ERITGRWIHPSSGRSYHTKFAPPKTPGLDDVTGEPLIQRKDDTAAVLKSRLEAFHVQTKP 209
Query: 572 VLAQYPDK--LRRINAERPVDEIFAEVQSIL 658
V+ Y K + ++AE+P E+ EVQ L
Sbjct: 210 VIDYYTKKGIVANLHAEKPPKEVTVEVQKAL 240
>04_04_1543 -
34270578-34270718,34271069-34271341,34271782-34271922,
34272365-34272667
Length = 285
Score = 76.6 bits (180), Expect = 2e-14
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Frame = +2
Query: 122 IVWV-LGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVP 298
+ WV LG PG GKGT ++ H++TGDL+R + S ++ L I+ G+LV
Sbjct: 54 VQWVFLGCPGVGKGTYASRLSQMLRVPHIATGDLVRDALASPGPFSEQLAEIVNNGKLVS 113
Query: 299 NEIVLDLLKEAILARAEESK-GFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQ 475
+EI+++LL + + AE+ + GF++DG+PR Q E + + ++I + E L
Sbjct: 114 DEIIINLLSKRLEEGAEKGELGFILDGFPRTIRQA-EILEGVTDIDLVINLKLREEALLA 172
Query: 476 RLLGRAASS 502
+ LGR S
Sbjct: 173 KCLGRRMCS 181
>08_01_0130 +
1040696-1041049,1042135-1042275,1042422-1042673,
1043797-1043904,1044289-1044593,1044720-1044841,
1044979-1045225,1045308-1045365,1045414-1045530,
1045718-1045753,1046492-1046554,1046958-1047047,
1047241-1047399,1047475-1047596,1048145-1048217,
1048307-1048375
Length = 771
Score = 55.2 bits (127), Expect = 5e-08
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = +2
Query: 131 VLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNEIV 310
V+G PG K ++ ++S G L+R E+ S K + + G+LVP +I+
Sbjct: 75 VMGRPGPQKHAHAARLAEVLAVPYISMGTLVRQELSPASSLYKKIANSVNEGKLVPEDII 134
Query: 311 LDLLKEAILARAEESK-GFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRLLG 487
LL + + + + GF++DG PR Q +E I + +++ F+ + +R G
Sbjct: 135 FGLLTKRLEEGYNKGETGFILDGIPRTHMQAEILDE-IVDIDLVLNFKCADNCFMKRRFG 193
>07_03_0057 +
12872946-12873152,12873371-12873421,12876335-12876480,
12876567-12876756
Length = 197
Score = 35.1 bits (77), Expect = 0.062
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 116 KPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLR 226
+P V V G PG+GK T C + H++ GDL+R
Sbjct: 12 RPNVLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVR 48
>11_03_0215 +
11809068-11809300,11809872-11809964,11810976-11811193,
11812780-11812832,11813411-11813527,11814817-11814908,
11815672-11815758,11816625-11816742
Length = 336
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 92 MAPIDTSKKPIVWVLGGPGSGKGTQCDKIVAKYGFT 199
MA ++ + P+V V+G GSGK TQ +I+ + G+T
Sbjct: 25 MAAVEAN--PVVVVIGETGSGKSTQLSQILHRRGYT 58
>09_02_0580 +
10884012-10884081,10884173-10884419,10884472-10884735,
10885630-10886093,10888326-10888396
Length = 371
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 67 YVSFNFIKNGTHRYIEKANRVGPGRSRIRKGNTMRQDRRQIRVHSPLDWR 216
Y + N I++ + R +++ N +GP +SRI + DRR +R+ W+
Sbjct: 166 YPALNAIQSQSMRLVQRTN-MGPSKSRILRYPDDPYDRRWLRMQLDRTWK 214
>05_05_0081 +
22248963-22249016,22249120-22249165,22249259-22249357,
22250178-22250337,22250858-22251128,22251295-22251486
Length = 273
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = -3
Query: 135 RTHTIGFFDVSMGAIFYKIKTDVVCDNLVISV 40
+T+ G+F+V+ A ++ + TDVV D L+ SV
Sbjct: 73 QTNWKGYFNVASYAPYFNVDTDVVVDRLISSV 104
>11_08_0091 -
28303446-28303732,28303825-28304297,28304383-28304574,
28304688-28304986,28305086-28305121
Length = 428
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 122 IVWVLGGPGSGKGTQCDKIVAKYGFT--HLSTGDL 220
I+ + GG G GK QC+ + AK G +S G+L
Sbjct: 151 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 185
>01_05_0027 -
17331888-17331968,17332236-17332806,17333190-17333335,
17333412-17333459
Length = 281
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 100 HRYIEKANRVGPGRSRIRKGNTMRQDRRQIRVHSPLDWRPAQG*SQKRLGEG 255
HR + + + PGRSR+ + MR+ ++ RV S RP+ K G G
Sbjct: 177 HRVLSRLHTTDPGRSRLAR---MRKSWKKFRVGSARCCRPSMSRPSKLPGSG 225
>08_02_0259 -
14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 29.1 bits (62), Expect = 4.1
Identities = 27/121 (22%), Positives = 55/121 (45%)
Frame = +2
Query: 122 IVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPN 301
++ ++G GSGK TQ + + + G+T + G + + + + + E G + +
Sbjct: 435 VIVIVGETGSGKTTQIPQYLHEAGYT--AKGKVACTQPRRVAAMSVAARVSQEMGVKLGH 492
Query: 302 EIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRL 481
E+ + E + K ++ DG + G E ++A SV++ EA TL+ +
Sbjct: 493 EVGYSIRFEDCTSEKTLIK-YMTDGMLLREFLG---EPDLASYSVVMVDEAHERTLSTDI 548
Query: 482 L 484
L
Sbjct: 549 L 549
>06_01_1150 + 9720227-9720858,9720948-9721118,9721199-9721403
Length = 335
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -1
Query: 713 FVEWFKQGSRARLTRPAGPGSTVPPRRSHPQDVPRL 606
F++W K +T P S +PP HP V L
Sbjct: 10 FIQWPKHSIEINITPRPAPSSRLPPTHPHPTVVSLL 45
>06_01_0011 + 162301-163218,163349-163987
Length = 518
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 668 PAGPGSTVPPRRSHPQDVPRLSS-*VCPGI 582
P G G+TV P+ HPQ +P S CPG+
Sbjct: 427 PDGAGATVDPKGQHPQLMPFGSGRRACPGM 456
>05_06_0027 -
25029725-25030017,25030097-25030211,25030347-25030504,
25030582-25030682,25030846-25030994,25031089-25031239,
25031329-25031482,25032249-25032321,25032446-25032676
Length = 474
Score = 28.7 bits (61), Expect = 5.4
Identities = 28/109 (25%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
Frame = +2
Query: 101 IDTSKKPIVWVLGGPGSGKGTQCDKIVAKY---GF-THLSTGDLLRAEVKSGSERAKCLT 268
+D K G P SGK T C K + GF L D RA ++
Sbjct: 87 LDPGKPSFTPTKGKPSSGKTTTCTKYAHYHQLKGFKPSLVCADTFRAGAFDQLKQNATKA 146
Query: 269 AIMERGELVPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEE 415
I G + ++ V ++ R E+S ++D R K + FEE
Sbjct: 147 KIPYYGSYMESDPVKIAVEGVERFRKEKSDLIIVDTSGRHKQEAALFEE 195
>05_03_0047 + 7793337-7793969
Length = 210
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 686 RARLTRPAGPGSTVPPRRSHPQDVPR 609
R R +PAGPG+ PPR + V R
Sbjct: 71 RDRAAKPAGPGAAAPPRDASTTAVSR 96
>08_02_1359 +
26382605-26382815,26382907-26382998,26383722-26383791,
26383895-26384013,26384580-26384676,26384781-26384860,
26384986-26385180,26385460-26385520,26386408-26386468,
26386900-26386993,26387085-26387157,26387158-26387270,
26387444-26387587
Length = 469
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +2
Query: 110 SKKP-IVWVLGGPGSGKGTQCDKIV 181
SK+P ++ V GG SGK T CD I+
Sbjct: 64 SKQPFVIGVSGGTASGKTTVCDMII 88
>06_03_0933 +
26067109-26067232,26067334-26067486,26068929-26069279,
26069375-26069451,26069665-26070982,26071948-26072009,
26072253-26072309
Length = 713
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -2
Query: 277 HNSGKAFRPLRAAFDFSPEQVSSREVS---EPVFGDDL 173
HN G +FRP +A + Q+SS S EP+FGD+L
Sbjct: 532 HNDGTSFRPSQANI-ANINQLSSFAASSGQEPMFGDEL 568
>06_01_0785 -
5873244-5873357,5873458-5873562,5874333-5874424,
5874525-5874594,5875080-5875202,5875287-5875372,
5875547-5875648,5875874-5876096,5876217-5876282,
5876407-5876497,5876574-5876701,5877734-5877749,
5878171-5878318,5878440-5878511,5878586-5878690,
5879122-5879291,5880093-5880424
Length = 680
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 335 LARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRLLGRAAS 499
+A A + + I+G P EK + + +E+ PV +I E ++ TL Q G A S
Sbjct: 92 IALAGDGRLLWIEGRPEEKGRMVIVKEDDKPVDIIPQ-EFAARTLAQEYGGGAFS 145
>12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,
7302885-7304042,7304133-7304291,7304397-7304504,
7305045-7305304,7305936-7306101,7307025-7307050,
7307318-7307402,7307486-7307695,7308815-7308872,
7308964-7309037,7309323-7309373,7309576-7309664,
7310027-7310104,7310164-7310269
Length = 1140
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 106 YIEKANRVGPGRSRIRKGNTMRQDRRQIRVHSPL-DWR 216
++EK P + R+ GN M +++ Q ++H + +WR
Sbjct: 924 FVEKEKYELPSKCRLHPGNDMFREQEQHKIHFDINEWR 961
>07_03_0676 + 20618677-20618840,20618938-20619502
Length = 242
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +1
Query: 505 PCRRQRGDHQAQAEDLPGQQRPRTGSIPGQTQEDKRGTSCG*DLRGGTVDPGPAGRVSRA 684
P RR+R A AE+ G++R R + RG G D GG G R R
Sbjct: 166 PARRERRLEAAGAEEREGRRRERASGGHRAKRRAGRGGGGGGDAGGGDGAAGARSRRHRR 225
Query: 685 RE 690
E
Sbjct: 226 LE 227
>07_01_0353 +
2563807-2564496,2564595-2564660,2564853-2564918,
2565044-2565115,2565196-2565261,2565355-2565417,
2565505-2565570,2565963-2566062,2567403-2567504,
2567772-2567995,2568200-2568314,2568653-2568763,
2568873-2569088,2569426-2569624,2570690-2570790,
2570872-2570919,2571052-2571236,2571345-2571462,
2571572-2571699,2571981-2572107,2572529-2572647,
2572770-2572938,2573078-2573162,2573247-2573320,
2573449-2573568,2574068-2574251,2574343-2574464,
2574548-2574755,2574885-2574958,2575047-2575185,
2575275-2575456,2575852-2576007,2576153-2576284,
2576508-2576566,2576913-2576945,2577065-2577196,
2577303-2577479
Length = 1675
Score = 27.9 bits (59), Expect = 9.4
Identities = 24/87 (27%), Positives = 44/87 (50%)
Frame = +3
Query: 165 NATRSSPNTGSLTSRLETCSGLKSKAARRGRNALPLLWKEASLSLMKSSWIC*KKRSWPV 344
NAT +SP + S+TS + G ++ + +G +++P+ K ++ S ++ P
Sbjct: 168 NATLNSPRSPSVTSSVTKKVGSRTSSMDKG-SSMPIRKKSSTADSRDSRFM-----MLPQ 221
Query: 345 LKNPKASSSTATLARSHRVSLLKRTSL 425
+ + KAS +R HRV LK+ L
Sbjct: 222 V-DLKASDEVRLDSRGHRVRTLKQLRL 247
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,484,117
Number of Sequences: 37544
Number of extensions: 454501
Number of successful extensions: 1464
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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