BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_H12
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical pr... 223 1e-58
AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kin... 223 1e-58
Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical pr... 123 1e-28
Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical pr... 116 2e-26
L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical p... 100 2e-21
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 92 5e-19
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 92 5e-19
Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical pr... 61 1e-09
Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical pr... 35 0.073
Z68342-6|CAD89740.1| 418|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z68342-5|CAA92774.2| 416|Caenorhabditis elegans Hypothetical pr... 33 0.17
U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical p... 28 6.3
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 28 6.3
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 28 8.4
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 28 8.4
>Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical
protein F38B2.4 protein.
Length = 210
Score = 223 bits (544), Expect = 1e-58
Identities = 116/193 (60%), Positives = 142/193 (73%), Gaps = 3/193 (1%)
Frame = +2
Query: 92 MAPIDTSKKPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTA 271
+AP+ + PI +++GGPGSGKGTQCDKIVAKYG THLS+GDLLR EVKSGS R LTA
Sbjct: 12 LAPLKAAGVPIFFIVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDEVKSGSPRGAQLTA 71
Query: 272 IMERGELVPNEIVLDLLKEAILARAEE-SKGFLIDGYPREKSQGIAFEENIAPVSVIIYF 448
IME G LVP E+VLDL+KEA+L E+ SKGFLIDGYPRE +QG FE I ++++F
Sbjct: 72 IMESGALVPLEVVLDLVKEAMLKAIEKGSKGFLIDGYPREVAQGQQFESEIQEAKLVLFF 131
Query: 449 EASSETLTQRLLGRAASSGRADDNEETIKLRLKTFLDNNDLVLAQYPD--KLRRINAERP 622
+ + ETL +RLL RA +SGRADDN +TIK RL TF+ + V+ Y KL RINAE
Sbjct: 132 DVAEETLVKRLLHRAQTSGRADDNADTIKKRLHTFVTSTAPVVDYYESKGKLVRINAEGS 191
Query: 623 VDEIFAEVQSILD 661
VD+IFA V + LD
Sbjct: 192 VDDIFAVVVANLD 204
>AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kinase
1 protein.
Length = 210
Score = 223 bits (544), Expect = 1e-58
Identities = 116/193 (60%), Positives = 142/193 (73%), Gaps = 3/193 (1%)
Frame = +2
Query: 92 MAPIDTSKKPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTA 271
+AP+ + PI +++GGPGSGKGTQCDKIVAKYG THLS+GDLLR EVKSGS R LTA
Sbjct: 12 LAPLKAAGVPIFFIVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDEVKSGSPRGAQLTA 71
Query: 272 IMERGELVPNEIVLDLLKEAILARAEE-SKGFLIDGYPREKSQGIAFEENIAPVSVIIYF 448
IME G LVP E+VLDL+KEA+L E+ SKGFLIDGYPRE +QG FE I ++++F
Sbjct: 72 IMESGALVPLEVVLDLVKEAMLKAIEKGSKGFLIDGYPREVAQGQQFESEIQEAKLVLFF 131
Query: 449 EASSETLTQRLLGRAASSGRADDNEETIKLRLKTFLDNNDLVLAQYPD--KLRRINAERP 622
+ + ETL +RLL RA +SGRADDN +TIK RL TF+ + V+ Y KL RINAE
Sbjct: 132 DVAEETLVKRLLHRAQTSGRADDNADTIKKRLHTFVTSTAPVVDYYESKGKLVRINAEGS 191
Query: 623 VDEIFAEVQSILD 661
VD+IFA V + LD
Sbjct: 192 VDDIFAVVVANLD 204
>Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical
protein F40F8.1 protein.
Length = 191
Score = 123 bits (297), Expect = 1e-28
Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 6/186 (3%)
Frame = +2
Query: 122 IVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAE-VKSGSERAKCLTAIMERGELVP 298
+V+VLG PGSGKGT C KI + HLS GDLLRAE + GSE + + ++ G +VP
Sbjct: 4 VVFVLGPPGSGKGTICAKIQENLNYVHLSAGDLLRAERQREGSEFGALIESHIKNGSIVP 63
Query: 299 NEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENI---APVSVIIYFEASSETL 469
EI LL+ A+ A ++KGFL+DG+PR + + + + A V +++
Sbjct: 64 VEITCSLLENAMKA-CGDAKGFLVDGFPRNEDNLQGWNKQMDGKALVQFVLFLSCPVSIC 122
Query: 470 TQRLLGRAASSGRADDNEETIKLRLKTFLDNNDLVLAQYPDK--LRRINAERPVDEIFAE 643
+R L R GR DDNEE++K R++T+ ++ + +R + +ERPVD ++A+
Sbjct: 123 IERCLNR--GQGRTDDNEESLKKRVETYNQQTFPIIEHFEKSGLVREVKSERPVDVVYAD 180
Query: 644 VQSILD 661
V+ + D
Sbjct: 181 VEKVFD 186
>Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical
protein C29F7.3 protein.
Length = 191
Score = 116 bits (279), Expect = 2e-26
Identities = 64/184 (34%), Positives = 106/184 (57%), Gaps = 6/184 (3%)
Frame = +2
Query: 122 IVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAE-VKSGSERAKCLTAIMERGELVP 298
+V+VLG PGSGKGT C +I G+ HLS GDLLRAE ++GSE + ++ G +VP
Sbjct: 4 VVFVLGPPGSGKGTICTQIHENLGYVHLSAGDLLRAERERAGSEYGALIEGHIKNGSIVP 63
Query: 299 NEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENI---APVSVIIYFEASSETL 469
EI LL+ A++A ++++ GFLIDG+PR + + + + +++ +
Sbjct: 64 VEITCALLENAMIA-SKDANGFLIDGFPRNEDNWSGWNKQMGGKVNEQFVLFLSCPVDVC 122
Query: 470 TQRLLGRAASSGRADDNEETIKLRLKTFLDNNDLVLAQYP--DKLRRINAERPVDEIFAE 643
R L R GR DDN E++K R++T+ + ++ + +R +N+ERPV E++ +
Sbjct: 123 IDRCLHR--GQGRTDDNVESLKKRVETYNQSTFPIIEHFEKVGMVREVNSERPVTEVYED 180
Query: 644 VQSI 655
V +
Sbjct: 181 VVKV 184
>L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical
protein C29E4.8 protein.
Length = 251
Score = 99.5 bits (237), Expect = 2e-21
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 6/132 (4%)
Frame = +2
Query: 134 LGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNEIVL 313
+G PGSGKGTQ KY HL+TGDLLRAEV SGSE K L A M+ G+LV +E+V
Sbjct: 32 IGPPGSGKGTQAPAFAQKYFSCHLATGDLLRAEVASGSEFGKELKATMDAGKLVSDEVVC 91
Query: 314 DLLKEAILARAEESKGFLIDGYPREKSQGIAFEENI----APVSVIIYFEASSETLTQRL 481
L+++ L + E GF++DG+PR Q +E + P+ ++ F + + L +R+
Sbjct: 92 KLIEQK-LEKPECKYGFILDGFPRTSGQAEKLDEILERRKTPLDTVVEFNIADDLLVRRI 150
Query: 482 LGRA--ASSGRA 511
GR +SGR+
Sbjct: 151 TGRLFHIASGRS 162
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical protein
F13E6.2 protein.
Length = 729
Score = 91.9 bits (218), Expect = 5e-19
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 5/219 (2%)
Frame = +2
Query: 20 AGNTRS*TEITKLSHTTSVLIL*KMAPIDTSKKPIVWVLGGPGSGKGTQCDKIVAKY-GF 196
A +TR+ T S S L + + + P++ VLG PGS K +I KY GF
Sbjct: 482 AADTRNKTSSNGSSEIVSAAELGEPVGLPNNA-PVILVLGAPGSQKNDISRRIAQKYDGF 540
Query: 197 THLSTGDLLRAEVKS--GSERAKCLTAIMERGELVPNEIVLDLLKEAILARAEESKGFLI 370
T LS GD+LR ++ + E ++ M G+ +P ++ +L E + +R + G++I
Sbjct: 541 TMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDPIPTKMCRTVLYEELHSRGTSNWGYVI 600
Query: 371 DGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRLLGRAASSGRADDNEETIKLRLKT 550
+GYP+ Q + E ++ + I + + + + + R + R+DD+ + ++ R++
Sbjct: 601 EGYPKSPDQLVDLEHSLQRTDLAILIDCTEQFCLEVINKRNRENKRSDDDSDAVRSRMEY 660
Query: 551 FLDNNDLVLAQYPD--KLRRINAERPVDEIFAEVQSILD 661
F N +L D KLR ++ + D +F EV ++D
Sbjct: 661 FKKNTLPMLKTLDDKGKLRVVDGDADPDTVFKEVVQVID 699
Score = 68.9 bits (161), Expect = 4e-12
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Frame = +2
Query: 119 PIVWVLGGPGSGKGTQCDKI---VAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIME--- 280
PI+ +GGPG GK ++ +A G H+ D++R + ++ E
Sbjct: 170 PIILFMGGPGGGKTRHAARVADSLADNGLVHICMPDIIRTALGKYKDKYPEWKEANEHYI 229
Query: 281 RGELVPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASS 460
RGEL+PN++ L LLK A + R ++ GF ++GYPRE Q FE + V++ + +
Sbjct: 230 RGELIPNQLALTLLK-AEMGRHPDAMGFFLEGYPREARQVEDFERQVKSVNMALILDYDE 288
Query: 461 ETLTQRL 481
TL + +
Sbjct: 289 RTLREHM 295
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 91.9 bits (218), Expect = 5e-19
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 5/219 (2%)
Frame = +2
Query: 20 AGNTRS*TEITKLSHTTSVLIL*KMAPIDTSKKPIVWVLGGPGSGKGTQCDKIVAKY-GF 196
A +TR+ T S S L + + + P++ VLG PGS K +I KY GF
Sbjct: 482 AADTRNKTSSNGSSEIVSAAELGEPVGLPNNA-PVILVLGAPGSQKNDISRRIAQKYDGF 540
Query: 197 THLSTGDLLRAEVKS--GSERAKCLTAIMERGELVPNEIVLDLLKEAILARAEESKGFLI 370
T LS GD+LR ++ + E ++ M G+ +P ++ +L E + +R + G++I
Sbjct: 541 TMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDPIPTKMCRTVLYEELHSRGTSNWGYVI 600
Query: 371 DGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRLLGRAASSGRADDNEETIKLRLKT 550
+GYP+ Q + E ++ + I + + + + + R + R+DD+ + ++ R++
Sbjct: 601 EGYPKSPDQLVDLEHSLQRTDLAILIDCTEQFCLEVINKRNRENKRSDDDSDAVRSRMEY 660
Query: 551 FLDNNDLVLAQYPD--KLRRINAERPVDEIFAEVQSILD 661
F N +L D KLR ++ + D +F EV ++D
Sbjct: 661 FKKNTLPMLKTLDDKGKLRVVDGDADPDTVFKEVVQVID 699
Score = 68.9 bits (161), Expect = 4e-12
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Frame = +2
Query: 119 PIVWVLGGPGSGKGTQCDKI---VAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIME--- 280
PI+ +GGPG GK ++ +A G H+ D++R + ++ E
Sbjct: 170 PIILFMGGPGGGKTRHAARVADSLADNGLVHICMPDIIRTALGKYKDKYPEWKEANEHYI 229
Query: 281 RGELVPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASS 460
RGEL+PN++ L LLK A + R ++ GF ++GYPRE Q FE + V++ + +
Sbjct: 230 RGELIPNQLALTLLK-AEMGRHPDAMGFFLEGYPREARQVEDFERQVKSVNMALILDYDE 288
Query: 461 ETLTQRL 481
TL + +
Sbjct: 289 RTLREHM 295
>Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical
protein ZK673.2 protein.
Length = 222
Score = 60.9 bits (141), Expect = 1e-09
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Frame = +2
Query: 125 VWVLGGPGSGKGTQCDKIVAKY---GFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELV 295
V + G GSGKGT +V ++ GF + + GD +R + G+E + + +GE V
Sbjct: 4 VLLSGAAGSGKGTIARMLVREFEPLGFNYFAAGDFIRDHIARGTEFGVRAQSFLNKGEHV 63
Query: 296 PNEIVLDLLKEAILAR-AEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLT 472
P+ I L AILA + ++DGYPR SQ + E AP+++I+ + + L
Sbjct: 64 PDSI----LNGAILAEMLKAGPRVVLDGYPRNMSQ-LKMVEEQAPLNLIVELKVPRKVLI 118
Query: 473 QRLLGRAA--SSGRA 511
RL + +SGRA
Sbjct: 119 DRLSKQLVHPASGRA 133
>Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical
protein E02H1.6 protein.
Length = 182
Score = 34.7 bits (76), Expect = 0.073
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 92 MAPIDTSKKPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLR 226
MA +T ++P + V G PG+GK T ++ K GF + +R
Sbjct: 1 MATPETRRRPNILVTGSPGTGKSTLGQQVAEKLGFVFIEVSKEVR 45
>Z68342-6|CAD89740.1| 418|Caenorhabditis elegans Hypothetical
protein F38E11.6b protein.
Length = 418
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2
Query: 122 IVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLL 223
IV++ GGP S KG+ +++ + + FT +S D++
Sbjct: 44 IVFIFGGPASQKGSIIEELTSSFNFTSISVEDIV 77
>Z68342-5|CAA92774.2| 416|Caenorhabditis elegans Hypothetical
protein F38E11.6a protein.
Length = 416
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2
Query: 122 IVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLL 223
IV++ GGP S KG+ +++ + + FT +S D++
Sbjct: 44 IVFIFGGPASQKGSIIEELTSSFNFTSISVEDIV 77
>U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical
protein ZK1290.10 protein.
Length = 412
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 50 TKLSHTTSVLIL*KMAPIDTSKKPIVWVLGGPGSGKGT 163
T+ S TTS AP++T+ P LG PG+ K T
Sbjct: 261 TEKSKTTSTYSTTTTAPVNTTSAPTTTHLGTPGTHKKT 298
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +3
Query: 126 CGSWEVPDQEREHNATRSSPNTGSL-TSRLETCS----GLKSKAARRGRNALPLLWKEAS 290
C +W PD++ H+ S TG+ T+++ S G S+ RG P + K S
Sbjct: 78 CCNWTFPDKKELHSHNNSMLKTGTPGTAKIIAVSSRRPGSLSQHELRGEERSPRIKKRPS 137
Query: 291 LSLMKSS 311
MK+S
Sbjct: 138 SKAMKTS 144
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +2
Query: 455 SSETLTQRLLGRAASSGRADDNEETIKLRLKTFLDNNDLVLAQYPDKLRRINAERPVDE 631
SSE + RL+ + + +E K +L+ + D N ++L+ + D + E+ + E
Sbjct: 334 SSEEVRSRLIQKITELEKQIGDERIAKEQLQAWQDENKVLLSDHQDTMEMATIEKELAE 392
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +2
Query: 461 ETLTQRLLGRAASSGRADDNEETIKLRL---KTFLDNNDLVLAQYPDKLRRINAERPVDE 631
E+ ++L + A + DD ++ + R+ K FLD +YP R+N E V++
Sbjct: 1214 ESEMRKLKAKRAEIVKNDDEQDDVSERIERFKEFLDEEVQTEWEYPQVSSRLNNEEEVEQ 1273
Query: 632 I 634
+
Sbjct: 1274 L 1274
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,955,237
Number of Sequences: 27780
Number of extensions: 364212
Number of successful extensions: 1096
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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