Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_H10
         (567 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23170-1|AAC46699.1|  163|Caenorhabditis elegans Hypothetical pr...   101   3e-22
U23524-2|ABD63241.1|  303|Caenorhabditis elegans Mirp k channel ...    29   2.3  
Z75547-8|CAA99898.1|  126|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical...    28   4.1  
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr...    28   5.4  
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g...    27   9.4  
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ...    27   9.4  

>U23170-1|AAC46699.1|  163|Caenorhabditis elegans Hypothetical
           protein F58F12.1 protein.
          Length = 163

 Score =  101 bits (243), Expect = 3e-22
 Identities = 47/89 (52%), Positives = 64/89 (71%)
 Frame = +2

Query: 110 YAKQVVKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTILENDGKQNKIFVSSGTITVNDD 289
           ++  VVKQ+DVP+ +G  G+L  HVPT+ VL+PGVV++  N+G   ++FVSSGT++VN D
Sbjct: 43  FSNAVVKQVDVPTLAGMVGVLANHVPTIGVLKPGVVSVTTNEGTVQRLFVSSGTLSVNID 102

Query: 290 SSVQVLAEEAHPLESIDRSAAQEALSKAQ 376
            S QVLAEE   +E ID SAA+  L  AQ
Sbjct: 103 GSCQVLAEEVLKVEEIDESAARAELDAAQ 131


>U23524-2|ABD63241.1|  303|Caenorhabditis elegans Mirp k channel
           accessory subunitprotein 1, isoform b protein.
          Length = 303

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -3

Query: 265 RRYEDFILFPIIFKNCNNTRSKNSQ 191
           RR++  +  P+++ N NN  SKN++
Sbjct: 274 RRFDVTVFLPVVYNNVNNYNSKNAE 298


>Z75547-8|CAA99898.1|  126|Caenorhabditis elegans Hypothetical
           protein R11D1.8 protein.
          Length = 126

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 21/90 (23%), Positives = 45/90 (50%)
 Frame = +2

Query: 125 VKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTILENDGKQNKIFVSSGTITVNDDSSVQV 304
           +K+++ P +SG   +  KH   ++    GVV   +N+  +    V++ T++    +SV+ 
Sbjct: 34  LKKVNSPKYSG---LANKHAIDVSAAAKGVVVSTKNEKGRPAKAVTTSTLSKTPVASVRR 90

Query: 305 LAEEAHPLESIDRSAAQEALSKAQSEFNSA 394
           LA+ A      ++ A + A +  +S+   A
Sbjct: 91  LAKNA-GFNKFNKLAQRRAAAIVRSQVKKA 119


>AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical
           protein Y47D3A.29 protein.
          Length = 1428

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = +2

Query: 110 YAKQVVKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTILENDGKQNK 250
           Y+K   +Q+ VP  +   G+LP+ +  L   R  V ++++++  + K
Sbjct: 859 YSKDSDEQLSVPQSTDIEGVLPREIRKLVECRRDVKSLMKSERNEAK 905


>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical
           protein ZK430.1 protein.
          Length = 1650

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +2

Query: 254 FVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQS 379
           F S        + S+++++EEA   + I  +A+++A   AQS
Sbjct: 459 FASEAVAATQSEESIEIISEEAPSSKKIKLTASEKAQKLAQS 500


>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
            protein.
          Length = 1492

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 359  PPVQHYGQCSPEGEPLRLKPELRSHH 282
            PP     Q SP+G P+   P   SHH
Sbjct: 1244 PPALSVFQHSPQGAPITAPPPASSHH 1269


>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
            protein Y53H1C.2a protein.
          Length = 1512

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 359  PPVQHYGQCSPEGEPLRLKPELRSHH 282
            PP     Q SP+G P+   P   SHH
Sbjct: 1264 PPALSVFQHSPQGAPITAPPPASSHH 1289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,924,849
Number of Sequences: 27780
Number of extensions: 168868
Number of successful extensions: 413
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)