Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_H09
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   7.5  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 344  KVKILWNTFLNKYCSFNCG 288
            K++I WN  LN    F CG
Sbjct: 1120 KIRICWNVLLNCVYLFLCG 1138


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = -1

Query: 220 PSFSRVCNWYLMSSM 176
           P ++ +C WY+  S+
Sbjct: 454 PEYTNICFWYVPKSL 468


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 572 RDRTAASFFDQGNRRICFESNSI 640
           R+ TAA FF+   R I   SN++
Sbjct: 304 RNFTAARFFELNRRTILGVSNAV 326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,781
Number of Sequences: 336
Number of extensions: 3532
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)