Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_H09
         (715 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024201-11|ABQ13050.1|  284|Caenorhabditis elegans Hypothetical...   146   2e-35
AC024201-10|ABQ13051.1|  281|Caenorhabditis elegans Hypothetical...   146   2e-35
AF039046-12|AAB94215.1|  299|Caenorhabditis elegans Hydroxy-acyl...    58   6e-09
Z46240-3|CAA86312.1|  309|Caenorhabditis elegans Hypothetical pr...    54   1e-07
Z22178-1|CAA80153.1|  298|Caenorhabditis elegans Hypothetical pr...    52   5e-07
Z81055-3|CAB02892.2|  434|Caenorhabditis elegans Hypothetical pr...    47   2e-05
AF000263-3|AAL77185.1|  697|Caenorhabditis elegans Hypothetical ...    44   1e-04
AF000263-2|AAK21464.1|  755|Caenorhabditis elegans Hypothetical ...    44   1e-04
AF000263-1|AAK21462.1|  781|Caenorhabditis elegans Hypothetical ...    44   1e-04
Z81055-2|CAB02891.2|  437|Caenorhabditis elegans Hypothetical pr...    41   8e-04
Z68108-2|CAA92135.1|  406|Caenorhabditis elegans Hypothetical pr...    31   0.82 
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ...    29   2.5  
U10402-4|AAK95873.1|  255|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>AC024201-11|ABQ13050.1|  284|Caenorhabditis elegans Hypothetical
           protein Y71F9B.9a protein.
          Length = 284

 Score =  146 bits (353), Expect = 2e-35
 Identities = 65/176 (36%), Positives = 105/176 (59%)
 Frame = +3

Query: 141 VYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTDLATAVKGAVFVQE 320
           +YD+  KQ+  A+E+++  L  L+  GL RG L A E    +  +T L   +K A+++QE
Sbjct: 1   MYDISEKQLQVALENVEKNLRKLDEHGLQRGNLSADEALLRVSTTTSLNEVMKNAIYMQE 60

Query: 321 CVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQVIVSHPVNPPYYV 500
              E+L+ + + ++ +D + D  TI              +GL +K + ++ HPVNPP ++
Sbjct: 61  SALEDLNFRIQFYKVIDEIADPTTILASSTSTIPASKFTDGLINKERCLIVHPVNPPLFL 120

Query: 501 PLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAILDEVWRL 668
           PL E+VPAPWT  +   +  EIM  + Q+PV L +E+ GFV+NR+Q+A+L E WRL
Sbjct: 121 PLTELVPAPWTSQDTVDRAAEIMRSVKQEPVKLKKEVLGFVVNRLQFALLAETWRL 176


>AC024201-10|ABQ13051.1|  281|Caenorhabditis elegans Hypothetical
           protein Y71F9B.9b protein.
          Length = 281

 Score =  146 bits (353), Expect = 2e-35
 Identities = 65/176 (36%), Positives = 105/176 (59%)
 Frame = +3

Query: 141 VYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTDLATAVKGAVFVQE 320
           +YD+  KQ+  A+E+++  L  L+  GL RG L A E    +  +T L   +K A+++QE
Sbjct: 1   MYDISEKQLQVALENVEKNLRKLDEHGLQRGNLSADEALLRVSTTTSLNEVMKNAIYMQE 60

Query: 321 CVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQVIVSHPVNPPYYV 500
              E+L+ + + ++ +D + D  TI              +GL +K + ++ HPVNPP ++
Sbjct: 61  SALEDLNFRIQFYKVIDEIADPTTILASSTSTIPASKFTDGLINKERCLIVHPVNPPLFL 120

Query: 501 PLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAILDEVWRL 668
           PL E+VPAPWT  +   +  EIM  + Q+PV L +E+ GFV+NR+Q+A+L E WRL
Sbjct: 121 PLTELVPAPWTSQDTVDRAAEIMRSVKQEPVKLKKEVLGFVVNRLQFALLAETWRL 176


>AF039046-12|AAB94215.1|  299|Caenorhabditis elegans
           Hydroxy-acyl-coa dehydrogenaseprotein 1 protein.
          Length = 299

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 7/184 (3%)
 Frame = +3

Query: 105 AXLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELK-------ASEQFQC 263
           A +    GY V +Y    K++ +A E IK  L  + +       ++       A  Q   
Sbjct: 26  AQVCLQAGYPVNLYGRSEKKLLEARETIKKNLIRVASKKKTDVPMEPAALEEIAQIQLDL 85

Query: 264 IKGSTDLATAVKGAVFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEG 443
           ++  TD+ +A + A    E V ENLDLK  +FQ +      N +                
Sbjct: 86  LQIHTDIPSAAEDAAMAIEAVAENLDLKLDIFQTIQKTCPQNCMLITNTSSLKLSQMLPV 145

Query: 444 LKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFV 623
           +++ +     H  NP   + LVE+V    T PE         +EI + PV+  ++  GF+
Sbjct: 146 IQNPALFAGLHFFNPVPVMKLVEVVSTDETSPETTNFLFNFCKEIKKLPVA-AKDTPGFI 204

Query: 624 LNRI 635
           +NR+
Sbjct: 205 VNRL 208


>Z46240-3|CAA86312.1|  309|Caenorhabditis elegans Hypothetical
           protein B0272.3 protein.
          Length = 309

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 36/135 (26%), Positives = 64/135 (47%)
 Frame = +3

Query: 264 IKGSTDLATAVKGAVFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEG 443
           IK ST+++ +VK A  V E + EN+D+K+K+F  ++      T+                
Sbjct: 95  IKMSTNVSDSVKDADLVIEAIVENIDIKRKLFAEVEVAAKPTTLITTNTSSLRLADIGLN 154

Query: 444 LKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFV 623
           LK KS+    H  NP   + L+E+V    T      +  +  + +G+  V+  ++  GF+
Sbjct: 155 LKDKSRFGGLHFFNPVPMMKLLEVVRHTETSDATFNQLVDYGKTVGKTTVA-CKDTPGFI 213

Query: 624 LNRIQYAILDEVWRL 668
           +NR+    + E  RL
Sbjct: 214 VNRLLVPYMFEALRL 228


>Z22178-1|CAA80153.1|  298|Caenorhabditis elegans Hypothetical
           protein F54C8.1 protein.
          Length = 298

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 5/193 (2%)
 Frame = +3

Query: 105 AXLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQC-----IK 269
           A + AS G+ V + DV  K +  A++ I   +  L      +G  K    F       IK
Sbjct: 27  AQVTASSGFNVMLADVNKKALDRAMKAISQSVTHLSKKQ--KGTDKEKSDFVTLTMSRIK 84

Query: 270 GSTDLATAVKGAVFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLK 449
              +++TAV  A  + E   EN+DLK+ +F  ++     ++I              +GL+
Sbjct: 85  TCNNVSTAVADADLIIEAAIENIDLKRGIFAQIEQSCKKDSILTTNTSSFLLEDVAKGLQ 144

Query: 450 HKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLN 629
            K++    H  NP   + L+E++ +  T  E      +    +G+  V+  ++  GF++N
Sbjct: 145 DKTRFGGLHFFNPVPVMKLLEVIRSDDTSDETYATLIKFGTAVGKTTVA-CKDSPGFIVN 203

Query: 630 RIQYAILDEVWRL 668
           R+      E  R+
Sbjct: 204 RLLIPYFFEAARM 216


>Z81055-3|CAB02892.2|  434|Caenorhabditis elegans Hypothetical
           protein F01G10.3 protein.
          Length = 434

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 31/119 (26%), Positives = 51/119 (42%)
 Frame = +3

Query: 312 VQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQVIVSHPVNPP 491
           + E V E++ LKK++F NL+++     I                L+  S ++  H  NP 
Sbjct: 119 IVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPSNLVGIHFFNPA 178

Query: 492 YYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAILDEVWRL 668
             + LVEI+    T  +      +  E I + PV L      FV NR+ +   D+  +L
Sbjct: 179 NVIRLVEIIYGSHTSSQAIATAFQACESIKKLPV-LVGNCKSFVFNRLLHVYFDQSQKL 236


>AF000263-3|AAL77185.1|  697|Caenorhabditis elegans Hypothetical
           protein T08B2.7c protein.
          Length = 697

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 35/127 (27%), Positives = 56/127 (44%)
 Frame = +3

Query: 288 TAVKGAVFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQVI 467
           +A+K A  V E V E+L LK KV + ++SVV  NTI                     +VI
Sbjct: 453 SAMKNADVVIEAVFEDLQLKHKVIKQIESVVGPNTIIASNTSALPIKDIAAASSRPDKVI 512

Query: 468 VSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAI 647
             H  +P   + L+EI+    T  E      ++  + G+  V + ++  GF + R    +
Sbjct: 513 GMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGKL-VVVVKDCPGFFVVRCLGPM 571

Query: 648 LDEVWRL 668
             E+ RL
Sbjct: 572 TAEIMRL 578


>AF000263-2|AAK21464.1|  755|Caenorhabditis elegans Hypothetical
           protein T08B2.7b protein.
          Length = 755

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 35/127 (27%), Positives = 56/127 (44%)
 Frame = +3

Query: 288 TAVKGAVFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQVI 467
           +A+K A  V E V E+L LK KV + ++SVV  NTI                     +VI
Sbjct: 427 SAMKNADVVIEAVFEDLQLKHKVIKQIESVVGPNTIIASNTSALPIKDIAAASSRPDKVI 486

Query: 468 VSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAI 647
             H  +P   + L+EI+    T  E      ++  + G+  V + ++  GF + R    +
Sbjct: 487 GMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGKL-VVVVKDCPGFFVVRCLGPM 545

Query: 648 LDEVWRL 668
             E+ RL
Sbjct: 546 TAEIMRL 552


>AF000263-1|AAK21462.1|  781|Caenorhabditis elegans Hypothetical
           protein T08B2.7a protein.
          Length = 781

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 35/127 (27%), Positives = 56/127 (44%)
 Frame = +3

Query: 288 TAVKGAVFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQVI 467
           +A+K A  V E V E+L LK KV + ++SVV  NTI                     +VI
Sbjct: 453 SAMKNADVVIEAVFEDLQLKHKVIKQIESVVGPNTIIASNTSALPIKDIAAASSRPDKVI 512

Query: 468 VSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAI 647
             H  +P   + L+EI+    T  E      ++  + G+  V + ++  GF + R    +
Sbjct: 513 GMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGKL-VVVVKDCPGFFVVRCLGPM 571

Query: 648 LDEVWRL 668
             E+ RL
Sbjct: 572 TAEIMRL 578


>Z81055-2|CAB02891.2|  437|Caenorhabditis elegans Hypothetical
           protein F01G10.2 protein.
          Length = 437

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 29/119 (24%), Positives = 50/119 (42%)
 Frame = +3

Query: 312 VQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQVIVSHPVNPP 491
           + E V E++ LKK++F  LD +   + I                L+  ++V+  H  NP 
Sbjct: 122 IVEAVFEDMKLKKELFTKLDKICKPSCIFGTNTSSLDLNEMSSVLRDPTKVVGIHFFNPA 181

Query: 492 YYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAILDEVWRL 668
             + +VE++    T  +      E    I + PV L      FV NR+    L++  +L
Sbjct: 182 NLIRMVEVIYGSKTSSKAVATAFEACRSIKKLPV-LVGNCPAFVFNRLLGVYLNQSQKL 239


>Z68108-2|CAA92135.1|  406|Caenorhabditis elegans Hypothetical
           protein T05A10.3 protein.
          Length = 406

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +3

Query: 210 ENDGLLRGELKASEQFQCIKGSTDLATAVKGAVFVQ-ECVPENLDLKKKVFQNL 368
           ++D LL   +       C+KGST+  TA++  VF++  C  E L+ +K+VF  +
Sbjct: 52  DSDDLLGSVVADHRGVFCVKGSTEEFTAIEPYVFIEHNCGYEGLN-EKRVFSKM 104


>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
           protein H06I04.5 protein.
          Length = 1138

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 453 KSQVIVSHPVNPPYYVPLVEIVPAP 527
           K   + + PV+PP  VP+  IVPAP
Sbjct: 700 KPDPVPAKPVSPPVIVPIDSIVPAP 724


>U10402-4|AAK95873.1|  255|Caenorhabditis elegans Hypothetical
           protein C34E10.11 protein.
          Length = 255

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 477 PVNPPYYVPLVEIVPAPWTKPE 542
           P+ PP    L  +V APW KPE
Sbjct: 47  PILPPSKKVLYHVVHAPWQKPE 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,776,059
Number of Sequences: 27780
Number of extensions: 329664
Number of successful extensions: 926
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)