Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_H08
         (852 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VEW3 Cluster: CG10311-PA; n=5; Endopterygota|Rep: CG1...    61   4e-08
UniRef50_Q16KE9 Cluster: Zinc finger protein; n=1; Aedes aegypti...    34   4.0  
UniRef50_A4J6T5 Cluster: Poly-gamma-glutamate synthesis protein ...    34   5.2  
UniRef50_Q9UL59 Cluster: Zinc finger protein 214; n=11; Eutheria...    33   6.9  

>UniRef50_Q9VEW3 Cluster: CG10311-PA; n=5; Endopterygota|Rep:
           CG10311-PA - Drosophila melanogaster (Fruit fly)
          Length = 165

 Score = 60.9 bits (141), Expect = 4e-08
 Identities = 42/171 (24%), Positives = 58/171 (33%)
 Frame = +3

Query: 213 LQKCCCCASTRTXXXXXXXXXXXXXXXXXXXXWTVKKHTVSFSTFIFDKEFDKKLSDLDI 392
           L  CC C STR                     +T + H   F T IFD          DI
Sbjct: 6   LNSCCLCQSTRNGSVISGILAIVLSIITIVVIFTTRVH---FKTIIFD------FIPNDI 56

Query: 393 PRXXXXXXXXXXXXXXXXXXVAINKRRSWLMLPWXXXXXXXXXXXXXXXXHTSITYYLDE 572
            +                  +   KR  +LM+PW                +T I +++D 
Sbjct: 57  VKIILVINLCMTILISLLMIIGALKRNHYLMVPWVVLGIMIAIGLLISVIYTGIVFFID- 115

Query: 573 HDHVIEATXXXXXXXXXXXXXXXXWAVVFSHYLDVRDEEERGRYRKAPYRR 725
             +V+                   W VV+S Y ++ +E ERGRY K PYRR
Sbjct: 116 -GYVLTGVLWLIFGLIVCAIMTYCWCVVYSEYANLSEENERGRYNKQPYRR 165


>UniRef50_Q16KE9 Cluster: Zinc finger protein; n=1; Aedes
           aegypti|Rep: Zinc finger protein - Aedes aegypti
           (Yellowfever mosquito)
          Length = 719

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
 Frame = +2

Query: 260 HCYPRHHTFDSHNHIDMDCQE----THSLIQHIYL*QGIRQEAFRLRHSKDNFNN-KFMF 424
           H   +H    S      DC +      S   HIY  + I++E ++  H    F+N   + 
Sbjct: 398 HMRSKHENISSDGFTCDDCGQFFTNKRSFSTHIYKHRAIKEEKYKCEHCGKAFSNAALLT 457

Query: 425 HHLDLHTSDRRYK 463
            H+ +HT +R Y+
Sbjct: 458 RHVRIHTGERPYE 470


>UniRef50_A4J6T5 Cluster: Poly-gamma-glutamate synthesis protein
           (Capsule biosynthesis protein) precursor; n=1;
           Desulfotomaculum reducens MI-1|Rep: Poly-gamma-glutamate
           synthesis protein (Capsule biosynthesis protein)
           precursor - Desulfotomaculum reducens MI-1
          Length = 396

 Score = 33.9 bits (74), Expect = 5.2
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -1

Query: 753 YGGVECLKIIFCKELCGIGHVLLRHARPSNG*IQLPKGRDISINI 619
           Y   E  + +FC E+ GI   +L +   +NG I LPKG+D ++++
Sbjct: 160 YRSAEDAQRVFCTEIKGIKIGILNYTESTNG-IPLPKGKDYAVDM 203


>UniRef50_Q9UL59 Cluster: Zinc finger protein 214; n=11;
           Eutheria|Rep: Zinc finger protein 214 - Homo sapiens
           (Human)
          Length = 606

 Score = 33.5 bits (73), Expect = 6.9
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +2

Query: 260 HCYPRHHTFDSHNHIDMDCQETHSLIQHIYL*QGIRQEAFRLRHSKDNFNNKFMFH-HLD 436
           H + R HT +    I+ D   + + + HI+    I ++ F+      +FN   + H H  
Sbjct: 319 HNHQRVHTEEKFYKIECDKDLSRNSLLHIHQRLHIGEKPFKCNQCGKSFNRSSVLHVHQR 378

Query: 437 LHTSDRRYK 463
           +HT ++ YK
Sbjct: 379 VHTGEKPYK 387


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,462,772
Number of Sequences: 1657284
Number of extensions: 14964094
Number of successful extensions: 30999
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30973
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)