Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_H08
         (852 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0207 - 1620192-1620280,1620408-1620451,1620703-1620791,162...    30   2.0  
11_01_0159 - 1318825-1319618,1319722-1319854                           29   6.2  

>11_01_0207 -
           1620192-1620280,1620408-1620451,1620703-1620791,
           1620870-1620914,1621441-1621548,1621638-1621723,
           1622202-1622289,1622403-1622576,1623084-1623159,
           1623256-1623305,1623392-1623454,1623689-1623791,
           1623871-1623973,1624679-1624739,1624864-1624904,
           1625076-1625154
          Length = 432

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = -2

Query: 827 QCLAVFVLGLKVY--FFWDP*HKRKSLTGALNA*KLSSVRSFAVSATFFFVTHV 672
           Q LAV   GL VY  F +   HK     G++N+ +++S  S  + AT+ F+TH+
Sbjct: 274 QVLAVAGAGLLVYQLFIYRSVHK---FLGSINSSRIASALSVPILATYPFMTHL 324


>11_01_0159 - 1318825-1319618,1319722-1319854
          Length = 308

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -2

Query: 602 YDGGFY-DVIVLIEVIGNRCVKDTDQQADCQNDTQHYPRQHQP 477
           YDGG+Y DV   ++V+GN  +   D  +    D      Q QP
Sbjct: 203 YDGGYYDDVKPAVDVVGNPLLSSFDCMSGADLDCCFDVHQQQP 245


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,799,140
Number of Sequences: 37544
Number of extensions: 398356
Number of successful extensions: 838
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)