Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_H07
         (818 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    24   1.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   1.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   3.9  
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    23   3.9  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   6.7  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   6.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.9  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 114 LLFF*IKSLFSKYNKT*IQILKIHNLYSHF 25
           LLFF + +LF+ Y K   +++  ++  SHF
Sbjct: 7   LLFFAVATLFAAYCKAESKVVCYYDSKSHF 36


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 14  VTSEKCEYKLCIFKICI*VLLYLLNSDFI*KNN 112
           +TSE CE  +      + +L+   NSDF+ +N+
Sbjct: 344 ITSETCEEIVAGVTTYLVILIQFNNSDFVQRNS 376


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 463 TLDVPWWGAIVLGTIVVRVVMFPLVIL 543
           TL   +W A+   TI+    + PL+IL
Sbjct: 227 TLANTFWSALYFLTIIFLFFIIPLIIL 253


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 562 QMNNNLPEIQLLQMKMTQARQTGNQIEAARYAQ 660
           Q+   LPEI     +   +RQ  N    ARY Q
Sbjct: 51  QIKGALPEIIGKNCERCDSRQVANARRIARYVQ 83


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 117 VIHHVQVTKPSW 152
           VIHH+   KP+W
Sbjct: 86  VIHHLIENKPNW 97


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 117 VIHHVQVTKPSW 152
           VIHH+   KP+W
Sbjct: 86  VIHHLIENKPNW 97


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 470 SKVTCRYSKQFCTNPTGPQP 411
           ++V CR  K  C  PT  +P
Sbjct: 78  ARVQCRSIKNECPEPTCDEP 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,822
Number of Sequences: 336
Number of extensions: 4465
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)