Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_H05
(496 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal... 99 4e-21
CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein. 99 4e-21
BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein L36a-... 99 4e-21
BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein L36a-... 99 4e-21
BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein L36a-... 99 4e-21
BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein L36a-... 99 4e-21
AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein L36a-... 99 4e-21
U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protei... 99 1e-20
CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein. 99 1e-20
BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a ... 99 1e-20
BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a ... 99 1e-20
BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a ... 99 1e-20
BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a ... 99 1e-20
AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting ... 99 1e-20
AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing prot... 99 1e-20
AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a ... 99 1e-20
BC058160-1|AAH58160.1| 25|Homo sapiens LOC554234 protein protein. 40 0.004
U21092-1|AAC50112.1| 568|Homo sapiens CD40 receptor associated ... 29 8.9
U19260-1|AAA65732.1| 568|Homo sapiens LMP1 associated protein p... 29 8.9
U15637-1|AAA56753.1| 567|Homo sapiens CD40 binding protein prot... 29 8.9
L38509-1|AAA68195.1| 543|Homo sapiens CD40-associated protein p... 29 8.9
BC075087-1|AAH75087.1| 568|Homo sapiens TNF receptor-associated... 29 8.9
BC075086-1|AAH75086.1| 568|Homo sapiens TNF receptor-associated... 29 8.9
>M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal
protein mRNA, complete cds. ).
Length = 106
Score = 99 bits (238), Expect = 4e-21
Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 290
Q +GK +L + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 291 LKRCKHFELGGDKKRK*QMIQF 356
+KRCKHFELGGDKKRK Q+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 153
MVNVPK RRT+ +QYKK K G
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein.
Length = 106
Score = 99 bits (238), Expect = 4e-21
Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 290
Q +GK +L + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 291 LKRCKHFELGGDKKRK*QMIQF 356
+KRCKHFELGGDKKRK Q+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 153
MVNVPK RRT+ +QYKK K G
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 99 bits (238), Expect = 4e-21
Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 290
Q +GK +L + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 291 LKRCKHFELGGDKKRK*QMIQF 356
+KRCKHFELGGDKKRK Q+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 153
MVNVPK RRT+ +QYKK K G
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 99 bits (238), Expect = 4e-21
Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 290
Q +GK +L + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 291 LKRCKHFELGGDKKRK*QMIQF 356
+KRCKHFELGGDKKRK Q+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 153
MVNVPK RRT+ +QYKK K G
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 99 bits (238), Expect = 4e-21
Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 290
Q +GK +L + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 291 LKRCKHFELGGDKKRK*QMIQF 356
+KRCKHFELGGDKKRK Q+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 153
MVNVPK RRT+ +QYKK K G
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 99 bits (238), Expect = 4e-21
Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 290
Q +GK +L + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 291 LKRCKHFELGGDKKRK*QMIQF 356
+KRCKHFELGGDKKRK Q+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 153
MVNVPK RRT+ +QYKK K G
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 99 bits (238), Expect = 4e-21
Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 290
Q +GK +L + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 291 LKRCKHFELGGDKKRK*QMIQF 356
+KRCKHFELGGDKKRK Q+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 153
MVNVPK RRT+ +QYKK K G
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protein
protein.
Length = 106
Score = 98.7 bits (235), Expect = 1e-20
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 290
Q +GK +L + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 291 LKRCKHFELGGDKKRK*QMIQF 356
+KRCKHFELGGDKKRK Q+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 153
MVNVPK RRT+ +QYKK K G
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein.
Length = 106
Score = 98.7 bits (235), Expect = 1e-20
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 290
Q +GK +L + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 291 LKRCKHFELGGDKKRK*QMIQF 356
+KRCKHFELGGDKKRK Q+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 153
MVNVPK RRT+ +QYKK K G
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 98.7 bits (235), Expect = 1e-20
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 290
Q +GK +L + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 291 LKRCKHFELGGDKKRK*QMIQF 356
+KRCKHFELGGDKKRK Q+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 153
MVNVPK RRT+ +QYKK K G
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 98.7 bits (235), Expect = 1e-20
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 290
Q +GK +L + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 291 LKRCKHFELGGDKKRK*QMIQF 356
+KRCKHFELGGDKKRK Q+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 153
MVNVPK RRT+ +QYKK K G
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 98.7 bits (235), Expect = 1e-20
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 290
Q +GK +L + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 291 LKRCKHFELGGDKKRK*QMIQF 356
+KRCKHFELGGDKKRK Q+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 153
MVNVPK RRT+ +QYKK K G
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 98.7 bits (235), Expect = 1e-20
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 290
Q +GK +L + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 291 LKRCKHFELGGDKKRK*QMIQF 356
+KRCKHFELGGDKKRK Q+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 153
MVNVPK RRT+ +QYKK K G
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting
protein 15 protein.
Length = 106
Score = 98.7 bits (235), Expect = 1e-20
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 290
Q +GK +L + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 291 LKRCKHFELGGDKKRK*QMIQF 356
+KRCKHFELGGDKKRK Q+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 153
MVNVPK RRT+ +QYKK K G
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing protein
6 protein.
Length = 106
Score = 98.7 bits (235), Expect = 1e-20
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 290
Q +GK +L + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 291 LKRCKHFELGGDKKRK*QMIQF 356
+KRCKHFELGGDKKRK Q+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 153
MVNVPK RRT+ +QYKK K G
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 98.7 bits (235), Expect = 1e-20
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 290
Q +GK +L + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 291 LKRCKHFELGGDKKRK*QMIQF 356
+KRCKHFELGGDKKRK Q+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 153
MVNVPK RRT+ +QYKK K G
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC058160-1|AAH58160.1| 25|Homo sapiens LOC554234 protein protein.
Length = 25
Score = 40.3 bits (90), Expect = 0.004
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +3
Query: 285 VALKRCKHFELGGDKKRK*QMIQF 356
+ +KR KHF+LGGDKKRK Q+IQF
Sbjct: 2 LTIKRYKHFKLGGDKKRKGQVIQF 25
>U21092-1|AAC50112.1| 568|Homo sapiens CD40 receptor associated
factor 1 protein.
Length = 568
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 343 CHFLFLSPPSSKCLHLFNATCDLTLQSAHSRRST 242
CH + SP ++C H F +C L S+ S + T
Sbjct: 56 CHLVLCSPKQTECGHRFCESCMAALLSSSSPKCT 89
>U19260-1|AAA65732.1| 568|Homo sapiens LMP1 associated protein
protein.
Length = 568
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 343 CHFLFLSPPSSKCLHLFNATCDLTLQSAHSRRST 242
CH + SP ++C H F +C L S+ S + T
Sbjct: 56 CHLVLCSPKQTECGHRFCESCMAALLSSSSPKCT 89
>U15637-1|AAA56753.1| 567|Homo sapiens CD40 binding protein
protein.
Length = 567
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 343 CHFLFLSPPSSKCLHLFNATCDLTLQSAHSRRST 242
CH + SP ++C H F +C L S+ S + T
Sbjct: 56 CHLVLCSPKQTECGHRFCESCMAALLSSSSPKCT 89
>L38509-1|AAA68195.1| 543|Homo sapiens CD40-associated protein
protein.
Length = 543
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 343 CHFLFLSPPSSKCLHLFNATCDLTLQSAHSRRST 242
CH + SP ++C H F +C L S+ S + T
Sbjct: 56 CHLVLCSPKQTECGHRFCESCMAALLSSSSPKCT 89
>BC075087-1|AAH75087.1| 568|Homo sapiens TNF receptor-associated
factor 3 protein.
Length = 568
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 343 CHFLFLSPPSSKCLHLFNATCDLTLQSAHSRRST 242
CH + SP ++C H F +C L S+ S + T
Sbjct: 56 CHLVLCSPKQTECGHRFCESCMAALLSSSSPKCT 89
>BC075086-1|AAH75086.1| 568|Homo sapiens TNF receptor-associated
factor 3 protein.
Length = 568
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 343 CHFLFLSPPSSKCLHLFNATCDLTLQSAHSRRST 242
CH + SP ++C H F +C L S+ S + T
Sbjct: 56 CHLVLCSPKQTECGHRFCESCMAALLSSSSPKCT 89
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,646,646
Number of Sequences: 237096
Number of extensions: 917195
Number of successful extensions: 2072
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2056
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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