Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_H03
         (817 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    27   0.24 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    27   0.24 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    24   1.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    24   1.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   6.7  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +2

Query: 416 LMVVGESGLGKSTLINSL 469
           L ++G SG GK+TL+N+L
Sbjct: 107 LAILGSSGAGKTTLLNTL 124


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +2

Query: 416 LMVVGESGLGKSTLINSL 469
           L ++G SG GK+TL+N+L
Sbjct: 107 LAILGSSGAGKTTLLNTL 124


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 713 RHMQDNRVHCCLYFVPPWAHSLRQVDLEMMK 805
           RH+  NR    L+F   W  S ++   E++K
Sbjct: 403 RHLNSNRAPLGLHFHASWLKSKKEFKEELIK 433


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 713 RHMQDNRVHCCLYFVPPWAHSLRQVDLEMMK 805
           RH+  NR    L+F   W  S ++   E++K
Sbjct: 410 RHLNSNRAPLGLHFHASWLKSKKEFKEELIK 440


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 713 RHMQDNRVHCCLYFVPPW 766
           RH ++NR    LYF   W
Sbjct: 411 RHYEENRAPLGLYFHAAW 428


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,292
Number of Sequences: 336
Number of extensions: 3584
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)