Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_H03
         (817 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.9  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   5.9  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   5.9  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   7.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 641 WRVCSAYIDEQFRQYFTDESGLNRRHMQDN 730
           W +    + EQ   YFT++ GLN  +   N
Sbjct: 207 WYLTKHNVPEQRLNYFTEDVGLNHFYFMLN 236


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 641 WRVCSAYIDEQFRQYFTDESGLNRRHMQDN 730
           W +    + EQ   YFT++ GLN  +   N
Sbjct: 207 WYLTKHNVPEQRLNYFTEDVGLNHFYFMLN 236


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/28 (25%), Positives = 18/28 (64%)
 Frame = -1

Query: 562 YFHSFLFDCRRFFYSILNIWNFSIFVKI 479
           Y +++  +C++ +Y+I+NI    + V +
Sbjct: 343 YNNNYNNNCKKLYYNIINIEQIPVPVPV 370


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 212 FPL*SSVLINYFAF*FLVSKI 150
           FP  S +LINYF F +  S +
Sbjct: 11  FPSTSFILINYFIFLYFNSLV 31


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = -2

Query: 675 NCSSMYAEQTRHESSQLIASPKPGVSTIVRRNLTPR 568
           N  S  ++ +R +   L  +P P + +     +TPR
Sbjct: 123 NSPSFLSDHSRDQEQNLYLTPSPQMYSSGGEEITPR 158


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,230
Number of Sequences: 438
Number of extensions: 4473
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)