Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_G24
         (778 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.6  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   4.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.3  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 144 LHFSFYFWRILVVEARVLGILRRRSASRHQSTK 46
           LHF+F  W++L       G L   S S +++ K
Sbjct: 53  LHFTFKSWKVLYTSLTSFGYLFCASLSFYKAFK 85


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 165 TDVCWFRPGGRADAKECSRY 224
           TD C  + G  ADA++C +Y
Sbjct: 36  TDQCPEKYGFFADAEQCDKY 55


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 12/44 (27%), Positives = 18/44 (40%)
 Frame = +1

Query: 118  SPKVKAEMESSVAWHRPMSAGSVQEEELMQKSARAMTQATDPLE 249
            S K+K E E      R   +   +EE+  + S   +T    P E
Sbjct: 881  SVKIKREAEDRDEDERSFHSNGAKEEDEDKPSVSPLTSPRQPAE 924


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.134    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,404
Number of Sequences: 336
Number of extensions: 3622
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)