Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_G21
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003137-6|AAB93644.1|  497|Caenorhabditis elegans Hypothetical ...    29   5.7  
Z46933-6|CAA87038.3|  321|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z46829-2|CAA86863.3|  321|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z75955-5|CAB00119.2|  285|Caenorhabditis elegans Hypothetical pr...    28   9.9  
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ...    28   9.9  

>AF003137-6|AAB93644.1|  497|Caenorhabditis elegans Hypothetical
           protein C27A12.7a protein.
          Length = 497

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
 Frame = +1

Query: 325 TSDNEIYSVTQTLKNEEILLINDVASVQPDTLEATTK---KSEPSLTVVL--PYTPRDGS 489
           TSDN+     +  K+E  +L ND+   + +T  A  +   + +P +  +L   Y     S
Sbjct: 37  TSDNDTSYAKEDKKSENEVLDNDLLEAEMNTTIADVQAVLQVDPGVCRILLHKYKWNKES 96

Query: 490 SLQELYTRPPRVEIVPASEVTPQ 558
            L+ LY  P  +  +  ++V P+
Sbjct: 97  LLERLYEHPDTIAFLIDAQVIPR 119


>Z46933-6|CAA87038.3|  321|Caenorhabditis elegans Hypothetical
           protein T14B1.2 protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 447 WFTFLCRCLKCVWLN*SHIIY 385
           W   +C CL  VWLN   +IY
Sbjct: 96  WTCQMCSCLNLVWLNVDKLIY 116


>Z46829-2|CAA86863.3|  321|Caenorhabditis elegans Hypothetical
           protein T14B1.2 protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 447 WFTFLCRCLKCVWLN*SHIIY 385
           W   +C CL  VWLN   +IY
Sbjct: 96  WTCQMCSCLNLVWLNVDKLIY 116


>Z75955-5|CAB00119.2|  285|Caenorhabditis elegans Hypothetical
           protein R07B7.10 protein.
          Length = 285

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 588 YLIYIGCFDWLRSYFRSRHNFNSW 517
           YL YI  ++ L  YFRS +  N+W
Sbjct: 178 YLFYIPVYEGLSRYFRSHNLENTW 201


>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
           protein Y54E2A.6 protein.
          Length = 1798

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +1

Query: 307 ITTPYSTSDNEIYSVTQTLKNEEILLINDVASVQPDTLEATT 432
           + T  STSDN + +V + L  +E+ L++D      +TL A T
Sbjct: 207 VITRKSTSDNSLINVVRLLIIDEVHLLHDERGPVIETLVART 248


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.316    0.134    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,447,820
Number of Sequences: 27780
Number of extensions: 369462
Number of successful extensions: 922
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)