Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_G14
(825 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113626-1|AAM29631.1| 163|Drosophila melanogaster RH70774p pro... 126 4e-29
AE013599-321|AAF59278.1| 163|Drosophila melanogaster CG11086-PA... 126 4e-29
X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal ... 35 0.12
AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p pro... 35 0.12
AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-P... 35 0.12
AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-P... 35 0.12
AE014297-4347|AAF56870.1| 1302|Drosophila melanogaster CG11898-P... 31 1.4
AE014298-906|AAO41633.1| 333|Drosophila melanogaster CG3960-PD,... 29 5.8
>AY113626-1|AAM29631.1| 163|Drosophila melanogaster RH70774p
protein.
Length = 163
Score = 126 bits (304), Expect = 4e-29
Identities = 69/140 (49%), Positives = 90/140 (64%)
Frame = +2
Query: 296 IGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGDSATHMQDVLLQA 475
IG+ IK+ L RA E R+ +GL AI LSK+ G+LFCL A+ GDSATHM +VLL+A
Sbjct: 31 IGRTIKSALLRAQSEARVIVGLSAAINVLSKSPEGSLFCLMAQPKDGDSATHMHEVLLEA 90
Query: 476 FCVENDIHVIKVDCETKLRRMLGYCSPMDFSCVLVHYPYTDPFTDSQEIDLSTLSEAERQ 655
FC ENDI+VIKVD TKL R+LG S SC LV + D + L++AE Q
Sbjct: 91 FCYENDIYVIKVDDATKLSRILGQDSVE--SCCLVQKVWADAPEEQ-------LTKAENQ 141
Query: 656 LIDHCESDWGYSQMPVIKLP 715
L+D+CE+ W Q P+++LP
Sbjct: 142 LVDYCEAHWDAPQQPIVQLP 161
>AE013599-321|AAF59278.1| 163|Drosophila melanogaster CG11086-PA
protein.
Length = 163
Score = 126 bits (304), Expect = 4e-29
Identities = 69/140 (49%), Positives = 90/140 (64%)
Frame = +2
Query: 296 IGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGDSATHMQDVLLQA 475
IG+ IK+ L RA E R+ +GL AI LSK+ G+LFCL A+ GDSATHM +VLL+A
Sbjct: 31 IGRTIKSALLRAQSEARVIVGLSAAINVLSKSPEGSLFCLMAQPKDGDSATHMHEVLLEA 90
Query: 476 FCVENDIHVIKVDCETKLRRMLGYCSPMDFSCVLVHYPYTDPFTDSQEIDLSTLSEAERQ 655
FC ENDI+VIKVD TKL R+LG S SC LV + D + L++AE Q
Sbjct: 91 FCYENDIYVIKVDDATKLSRILGQDSVE--SCCLVQKVWADAPEEQ-------LTKAENQ 141
Query: 656 LIDHCESDWGYSQMPVIKLP 715
L+D+CE+ W Q P+++LP
Sbjct: 142 LVDYCEAHWDAPQQPIVQLP 161
>X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal
protein S12 protein.
Length = 151
Score = 35.1 bits (77), Expect = 0.12
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +2
Query: 275 VIAAKSSIGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGDSATHM 454
V+ I ++ VL+++ + L G+ A + L K A+ C+ AE+ D +
Sbjct: 26 VLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKR--QAVLCILAES--FDEPNYK 81
Query: 455 QDVLLQAFCVENDIHVIKVDCETKLRRMLGYC 550
+ L+ A C E+ I +I+VD KL G C
Sbjct: 82 K--LVTALCNEHQIPLIRVDSHKKLGEWSGLC 111
>AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p
protein.
Length = 139
Score = 35.1 bits (77), Expect = 0.12
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +2
Query: 275 VIAAKSSIGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGDSATHM 454
V+ I ++ VL+++ + L G+ A + L K A+ C+ AE+ D +
Sbjct: 14 VLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKR--QAVLCILAES--FDEPNYK 69
Query: 455 QDVLLQAFCVENDIHVIKVDCETKLRRMLGYC 550
+ L+ A C E+ I +I+VD KL G C
Sbjct: 70 K--LVTALCNEHQIPLIRVDSHKKLGEWSGLC 99
>AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-PC,
isoform C protein.
Length = 139
Score = 35.1 bits (77), Expect = 0.12
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +2
Query: 275 VIAAKSSIGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGDSATHM 454
V+ I ++ VL+++ + L G+ A + L K A+ C+ AE+ D +
Sbjct: 14 VLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKR--QAVLCILAES--FDEPNYK 69
Query: 455 QDVLLQAFCVENDIHVIKVDCETKLRRMLGYC 550
+ L+ A C E+ I +I+VD KL G C
Sbjct: 70 K--LVTALCNEHQIPLIRVDSHKKLGEWSGLC 99
>AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-PB,
isoform B protein.
Length = 139
Score = 35.1 bits (77), Expect = 0.12
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +2
Query: 275 VIAAKSSIGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGDSATHM 454
V+ I ++ VL+++ + L G+ A + L K A+ C+ AE+ D +
Sbjct: 14 VLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKR--QAVLCILAES--FDEPNYK 69
Query: 455 QDVLLQAFCVENDIHVIKVDCETKLRRMLGYC 550
+ L+ A C E+ I +I+VD KL G C
Sbjct: 70 K--LVTALCNEHQIPLIRVDSHKKLGEWSGLC 99
>AE014297-4347|AAF56870.1| 1302|Drosophila melanogaster CG11898-PA
protein.
Length = 1302
Score = 31.5 bits (68), Expect = 1.4
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +2
Query: 23 KCTNASSVSKVVKLLCHKFKLLREV--*VCLHNRRILCKVLVHSVKIHIRISLRSLEISE 196
+C N K+ L+ H+ +LLR V V L RI + ++K IR + E
Sbjct: 592 RCLNEFLSKKIRILVTHRVQLLRHVDHLVLLEGGRISVQGHYDALKKLIRFRMSVANDVE 651
Query: 197 IQELRSIRLSKMYKE 241
+ +LR++R +Y+E
Sbjct: 652 VAKLRAMRTDSVYEE 666
>AE014298-906|AAO41633.1| 333|Drosophila melanogaster CG3960-PD,
isoform D protein.
Length = 333
Score = 29.5 bits (63), Expect = 5.8
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 555 PWTSVACWSTIRIQIHSQTVKK*IYQHYLKPRDS*STTANQTGAIHKCPSSSCP 716
P++S A S I+ ++ Q I Y K +S STT N + +K SSS P
Sbjct: 30 PFSSAALRSVIKHRLLLQVKTTRITNTYSKSGNSTSTTNNTSNTTNKVSSSSAP 83
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,882,677
Number of Sequences: 53049
Number of extensions: 792896
Number of successful extensions: 1743
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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