Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_G13
(770 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPYUG7.05 |||delta-1-pyrroline-5-carboxylate reductase |Schizo... 77 2e-15
SPAC22E12.16c |pik1||phosphatidylinositol kinase Pik1|Schizosacc... 29 0.97
SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|c... 28 1.3
SPCC1259.10 |pgp1||metallopeptidase Pgp1|Schizosaccharomyces pom... 28 1.7
SPBC947.02 |apl2||AP-1 adaptor complex subunit Apl2 |Schizosacch... 27 3.0
SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces... 26 6.9
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 25 9.1
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 25 9.1
>SPAPYUG7.05 |||delta-1-pyrroline-5-carboxylate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 77.4 bits (182), Expect = 2e-15
Identities = 47/163 (28%), Positives = 78/163 (47%)
Frame = +3
Query: 282 KNSDVVNNCEIIFLGIKPNKLETAVQQCLNGIESLSKKKSILFVSMLAGRKINDLQEVLS 461
+N+++ ++ L KP A + LN + K L +S+LAG+ I+ LQ +L
Sbjct: 70 ENAEMAAISNVLLLSCKPQ----AAEDVLNSPKMKEALKGKLILSILAGKTISSLQSMLD 125
Query: 462 VLSPYADIRIIRIMPNTPMAVGAGICLYTPDNNVSQDQCKFLEDLLSSTALCERVEEPTM 641
R+IRIMPNT + + + P N +++ KF E + + ++ E +
Sbjct: 126 -----ESTRVIRIMPNTASRIRESMSVICPGPNATEEDIKFAEWVFNGIGRSMKLPEKLI 180
Query: 642 DTLGVLTACGPAFIYIVIEALXDGAVKQGVPRAMALRHAXQVV 770
D + GPAF+ +IEA+ DG V G+P A A Q +
Sbjct: 181 DAATAVCGSGPAFVATMIEAMTDGGVMMGIPFPQAQELAAQTM 223
>SPAC22E12.16c |pik1||phosphatidylinositol kinase
Pik1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 28.7 bits (61), Expect = 0.97
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = -3
Query: 621 FHIVQCYSIDLPKIYIDLVKHCYPVCKDIYQPLQP*VYLALSLLFLYQHKEIVHLTP 451
F +Q + +DL + C+ +CK +Y +Q V+++ S L Q K ++TP
Sbjct: 94 FWYLQAHMVDLG---LQPHSSCFKICKRLYNRIQILVFMSSSSLIQSQQKISENVTP 147
>SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 411
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 117 SNNFKIGFVGGGNMSTAIVQGILKNDAYPASNI 215
S++ I FV GG + G+LK DA ASN+
Sbjct: 191 SSSTSISFVNGGPNFRKVKSGLLKPDADAASNL 223
>SPCC1259.10 |pgp1||metallopeptidase Pgp1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 412
Score = 27.9 bits (59), Expect = 1.7
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 165 AIVQGILKNDAYPASNIWVSGPHLENLQKWSLLNTNVSIKNSDV-----VNNCEIIFLGI 329
A+ + K+ +P NI VSG H + SLLN + + SD+ ++ C +LGI
Sbjct: 162 ALAVQLEKSIDFPYLNILVSGGHTMLVYSNSLLNHEIIVTTSDIAVGDYLDKC-AKYLGI 220
Query: 330 K-PNKLETAVQQCLNGIESLSKKKSIL-FVSMLAGRKINDLQEVLSVLSPYADIRIIRIM 503
N++ A + E S S+ + + K++ S L YA RIIR
Sbjct: 221 PWDNEMPAAALEQFASPEINSTSYSLKPPIPLNTREKVHSASFSFSGLESYA-CRIIRKT 279
Query: 504 P 506
P
Sbjct: 280 P 280
>SPBC947.02 |apl2||AP-1 adaptor complex subunit Apl2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 683
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +3
Query: 189 NDAYPASNIWVSGPHLENLQKWSLLNTNVSIKNSDVVNNCEIIFLGIKPNKLETAVQQCL 368
N+ +VS LE +++ +V++K V+N+C IFL I + VQ+
Sbjct: 354 NETISELRAYVSEVELEFVKQTIKCLGDVALKVPSVINDCISIFLEIYELNISYMVQEVT 413
Query: 369 NGIESLSKK 395
+E++ +K
Sbjct: 414 VVMETVLRK 422
>SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1155
Score = 25.8 bits (54), Expect = 6.9
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Frame = +3
Query: 87 QLPLCATNNMSNNFKIGFVGGGNMST-AIVQGILKNDAYP---ASNIWVSGPHLENLQKW 254
Q L +N SN + N S + I +D +P A+ + P ++ +W
Sbjct: 96 QTVLLQSNFTSNPTSLEIFSSQNTSFFGNISAIFCDDKFPYAYATFTFSDKPSFTSIYRW 155
Query: 255 SLLNTNVSIKN-SDVVNNCEIIF 320
++ N+NV+I++ +V N + +F
Sbjct: 156 NVTNSNVTIEHFYNVKGNVDSLF 178
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 25.4 bits (53), Expect = 9.1
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +3
Query: 480 DIRIIRIMPNTPMAVGAGICLYTPDNNVSQDQCKFLEDLL 599
D ++ + N P+ V A +T +N + C FL ++
Sbjct: 267 DSSLVPVYKNEPLIVDADDYFFTDENKQTLSLCSFLSQVM 306
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 25.4 bits (53), Expect = 9.1
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 255 SLLNTNVSIKNSDVVN--NCEIIFLGIKPNKLETAVQQCLNGIESLSKKKSILFVSMLA 425
+L+NT K S + + E++ I +T+ +QCL +S + S +F+S+L+
Sbjct: 414 NLINTLQDKKKSSTFSKKDREVLLKKISEIDSQTSFEQCLAYADSAADLDSSVFISLLS 472
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,091,237
Number of Sequences: 5004
Number of extensions: 63926
Number of successful extensions: 187
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 371330890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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