Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_G13
         (770 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   3.4  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   4.5  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      24   6.0  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   7.9  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   7.9  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    23   7.9  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 568 CETLLSGV*RHIPAPTAIGVF 506
           C  LL+ +  HIP P   GVF
Sbjct: 922 CSVLLTPLLSHIPMPVLYGVF 942


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 692 HNINKCRSTSSQNSKCVHC 636
           H  + CRST+ + + C+ C
Sbjct: 516 HIASNCRSTADRQNLCIRC 534


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 752 TQCHCSRNTLLHSTIG*G 699
           T CHC+RN L HS +  G
Sbjct: 31  TNCHCARN-LSHSLLSFG 47


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -1

Query: 692 HNINKCRSTSSQNSKCVHC 636
           HN   CRS   + + C+ C
Sbjct: 559 HNARDCRSPVDRQNVCIRC 577


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = -2

Query: 679 NAGPQAVKTPSVSIVGSSTLSHSAVLLNRSSKNLH*SCETLLSGV*RH 536
           ++GP+  K   ++ V  S L ++A + + ++KN    C  +L  V +H
Sbjct: 789 HSGPKCAKRRLLASVVDSILRYAAPVWHEATKNQ--ECRRMLQRVQKH 834


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = +3

Query: 282 KNSDVVNNCEIIFLGIKPNKLETAVQQCLNGIESLSKKKSILFVSMLAGR 431
           + SDV  +   +F  +     ET + +  NG+++ S K      +++A R
Sbjct: 348 QTSDVEKDLRDLFTELDGVTFETKMTKSFNGMQTASVKLPTKLATLVAAR 397


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 809,048
Number of Sequences: 2352
Number of extensions: 16682
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)