Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_G13
         (770 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67995-1|CAA91943.1|  279|Caenorhabditis elegans Hypothetical pr...   113   2e-25
U58750-5|AAB00645.1|  299|Caenorhabditis elegans Hypothetical pr...    82   4e-16
Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr...    28   8.5  
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>Z67995-1|CAA91943.1|  279|Caenorhabditis elegans Hypothetical
           protein M153.1 protein.
          Length = 279

 Score =  113 bits (271), Expect = 2e-25
 Identities = 68/212 (32%), Positives = 111/212 (52%), Gaps = 2/212 (0%)
 Frame = +3

Query: 129 KIGFVGGGNMSTAIVQGILKNDAYPASNIWVSGPHLEN--LQKWSLLNTNVSIKNSDVVN 302
           KIGF+G G M+ A+ +G++ +    A NI  S P  +   L +   L  N +  N++VV 
Sbjct: 2   KIGFIGAGKMAQALARGLINSGRITADNIIASSPKRDEVFLDQCKALGLNTTHDNAEVVQ 61

Query: 303 NCEIIFLGIKPNKLETAVQQCLNGIESLSKKKSILFVSMLAGRKINDLQEVLSVLSPYAD 482
             +++FL +KP  +     +      +LSK+   L VS+  G  I +++ +L   S    
Sbjct: 62  KSDVVFLAVKPVHVSKVASEIA---PALSKEH--LVVSIALGITIRNIESLLPTKS---- 112

Query: 483 IRIIRIMPNTPMAVGAGICLYTPDNNVSQDQCKFLEDLLSSTALCERVEEPTMDTLGVLT 662
            R++R+MPNTP  V AG   +   +       + +E LLS+      V E  +D +  L+
Sbjct: 113 -RVVRVMPNTPSVVRAGASAFAMGSACRDGDAETVEKLLSTVGFAVEVPEIHIDPVTGLS 171

Query: 663 ACGPAFIYIVIEALXDGAVKQGVPRAMALRHA 758
             GP++++ VIE L DG VK G+PR +AL+ A
Sbjct: 172 GSGPSYMFAVIEGLADGGVKVGLPRDLALKLA 203


>U58750-5|AAB00645.1|  299|Caenorhabditis elegans Hypothetical
           protein F55G1.9 protein.
          Length = 299

 Score = 82.2 bits (194), Expect = 4e-16
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 7/229 (3%)
 Frame = +3

Query: 105 TNNMSNNFKIGFVGGGNMSTAIVQGILKNDAYPASNIWVSGPHLENLQKWSLLN-TNVSI 281
           TN  S +    F+GGGNM+ AI++G       P SNI +     ++ +KW  L   NV  
Sbjct: 8   TNGSSESVPFVFIGGGNMAAAIIKGCQNKGFTPKSNIVIGVQTEKSAEKWRQLGYKNVFT 67

Query: 282 KNSDVVN--NCEIIFLGIKPNKLETAVQQCLNGIESLSKKKSILFVSMLAGRKINDLQEV 455
              +++   +  I  + +KP   E  V         ++ +   + +S++AG  +  L   
Sbjct: 68  NTLEMLERYSTAIYVICVKPQVFEEVVSSW-----PVNSRPEFI-ISVMAGVPLKVLNAK 121

Query: 456 LSVLSPYADIRIIRIMPNTPMAVGAG---ICLYTPDNNVSQD-QCKFLEDLLSSTALCER 623
           L  +S   +  I+R+MPN   ++GAG   +C    +  ++QD   +   +        E 
Sbjct: 122 LPFVS--GNTTIVRLMPNVASSIGAGASTMCYEKNEKIMNQDSHIELAREFAECVGTVEL 179

Query: 624 VEEPTMDTLGVLTACGPAFIYIVIEALXDGAVKQGVPRAMALRHAXQVV 770
           + E   +    +    PA+ ++ IE+L DGAV QG+ RA A R A Q V
Sbjct: 180 IPERCFNPAMAIGGSSPAWTFMYIESLADGAVAQGLGRAEAKRLAAQAV 228


>Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical protein
            F43G6.1b protein.
          Length = 1069

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 19/86 (22%), Positives = 38/86 (44%)
 Frame = +3

Query: 129  KIGFVGGGNMSTAIVQGILKNDAYPASNIWVSGPHLENLQKWSLLNTNVSIKNSDVVNNC 308
            +IG +         ++GIL +D    + I       + +  WSL  TN S K S+++ + 
Sbjct: 964  EIGVMSAYRRQVDHIRGILNSDELEVNTIDSYQGREKRVIIWSLTWTNNSTKKSELLKDE 1023

Query: 309  EIIFLGIKPNKLETAVQQCLNGIESL 386
              + + +   + +  V  C N  E++
Sbjct: 1024 RRVNVALTRARQKLVVVGCKNSAETI 1049


>Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical protein
            F43G6.1a protein.
          Length = 1105

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 19/86 (22%), Positives = 38/86 (44%)
 Frame = +3

Query: 129  KIGFVGGGNMSTAIVQGILKNDAYPASNIWVSGPHLENLQKWSLLNTNVSIKNSDVVNNC 308
            +IG +         ++GIL +D    + I       + +  WSL  TN S K S+++ + 
Sbjct: 1000 EIGVMSAYRRQVDHIRGILNSDELEVNTIDSYQGREKRVIIWSLTWTNNSTKKSELLKDE 1059

Query: 309  EIIFLGIKPNKLETAVQQCLNGIESL 386
              + + +   + +  V  C N  E++
Sbjct: 1060 RRVNVALTRARQKLVVVGCKNSAETI 1085


>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical protein
            K09C8.5 protein.
          Length = 1328

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +2

Query: 698  SLXRW--CCEARCSSSNGIASRXTGG 769
            +L  W  CC+A CSSS+ +A    GG
Sbjct: 1243 NLNMWTTCCDAMCSSSSTLARNAIGG 1268


>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical protein
            K09C8.5 protein.
          Length = 1328

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +2

Query: 698  SLXRW--CCEARCSSSNGIASRXTGG 769
            +L  W  CC+A CSSS+ +A    GG
Sbjct: 1243 NLNMWTTCCDAMCSSSSTLARNAIGG 1268


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,351,943
Number of Sequences: 27780
Number of extensions: 368015
Number of successful extensions: 935
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)