Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_G04
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   1.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   4.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   7.9  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = -2

Query: 692 WINSYVLNRRLRFWYQLFILIRFQIPYMYNATLVSNHYLGLIRMKHYCIHRSL 534
           ++N YV    + +     +LIR +I  +  + + S H  G I  +H  +H  +
Sbjct: 167 FVNEYVQAIEVLYICSYTVLIRNKISNLNTSLIHSTHLNGDIVKEHQNLHNKI 219


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 336 SIYGYMILVVPIQTRSQLLRTSPKTYLE 419
           S++GY  L++     SQL+  + KT L+
Sbjct: 369 SLFGYQTLLITFHIGSQLVLHTVKTVLK 396


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 123 LAYLFLKSTFFYFQLPGN 70
           +++ F  STFFYF   GN
Sbjct: 237 VSFYFFISTFFYFFTTGN 254


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 123 LAYLFLKSTFFYFQLPGN 70
           +++ F  STFFYF   GN
Sbjct: 233 VSFYFFISTFFYFFTTGN 250


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 442 LDVHRR*GLHSQDMGSQGLHHVQGV 516
           LDV +   LHS D+     HH Q +
Sbjct: 298 LDVEQMNLLHSNDLNMHQQHHQQNM 322


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 89  ISNCQVILKFRILIFNFELSE 27
           ++NC VI K R ++ NF+  E
Sbjct: 93  VNNCDVIEKPRKVLPNFKTDE 113


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 231 HSLIV*S*PPVTKATCDPPREAVVSP 154
           H+L+    PP T+  C  P   ++SP
Sbjct: 218 HNLLSDKNPPNTENNCAQPVVVIMSP 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,310
Number of Sequences: 336
Number of extensions: 4742
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)