Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_G03
         (442 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   1.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   1.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   1.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   3.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.2  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 329 ACWLTIPSSLWNSFLEV*LTPL 264
           +CW    + LW S L V   PL
Sbjct: 392 SCWAQFKAVLWRSILAVFKEPL 413


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 329 ACWLTIPSSLWNSFLEV*LTPL 264
           +CW    + LW S L V   PL
Sbjct: 392 SCWAQFKAVLWRSILAVFKEPL 413


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 230 PTDDLHMKRTKSEV*VRPPE 289
           PT  LH+K +     VRPP+
Sbjct: 504 PTKKLHLKNSPISKKVRPPQ 523


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 341  DDFHACWLTIPSSLWNS 291
            +  H  W T PS+ W+S
Sbjct: 1029 EHMHPDWTTKPSTWWSS 1045


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 234 VGPRCDSDV 208
           VGPRC+ D+
Sbjct: 291 VGPRCEGDI 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,096
Number of Sequences: 336
Number of extensions: 1626
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)