Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_G03
         (442 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical ...    55   2e-08
L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical pr...    46   2e-05
L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical pr...    46   2e-05
U50308-4|AAG24030.2|  483|Caenorhabditis elegans Amino acid tran...    29   1.5  
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical
           protein F32D1.2 protein.
          Length = 54

 Score = 55.2 bits (127), Expect = 2e-08
 Identities = 23/51 (45%), Positives = 34/51 (66%)
 Frame = +1

Query: 88  MSAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRVTPWANGR 240
           M AWR AGL Y+ YS IAA++ R+  KQ     A+K+ E+ +++T W NG+
Sbjct: 1   MVAWRAAGLNYVRYSQIAAEITRKCTKQVGGKAAVKKPEATLKITTWENGK 51


>L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical
           protein ZC262.5 protein.
          Length = 54

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = +1

Query: 88  MSAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRVTPWANGR 240
           M AWR AGL Y+ YS IAA+V+R+  K       +K+ ++ ++ T W NG+
Sbjct: 1   MVAWRAAGLNYVRYSQIAAQVVRQCTK---GGANVKKPQATLKTTAWENGK 48


>L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical
           protein R05D3.6 protein.
          Length = 54

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = +1

Query: 88  MSAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRVTPWANGR 240
           M AWR AGL Y+ YS IAA+V+R+  K       +K+ ++ ++ T W NG+
Sbjct: 1   MVAWRAAGLNYVRYSQIAAQVVRQCTK---GGANVKKPQATLKTTAWENGK 48


>U50308-4|AAG24030.2|  483|Caenorhabditis elegans Amino acid
           transporter protein 2 protein.
          Length = 483

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 25/77 (32%), Positives = 36/77 (46%)
 Frame = -3

Query: 386 LNSIIYCTILHKLIVDDFHACWLTIPSSLWNSFLEV*LTPLT*SFSCAGRPLAQGVTLT* 207
           L +I Y ++L    + D  A  +T    +  +F    L PL  SFSC G     G+ +T 
Sbjct: 259 LVNIAYFSVLTVDEILDSDAVAITFADKILGTFGSKILMPLFVSFSCVGS--LNGILIT- 315

Query: 206 DSSRFNASARNSCFSDL 156
            S  F + ARNS   +L
Sbjct: 316 CSRMFFSGARNSQLPEL 332


>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
           protein F59A3.1 protein.
          Length = 1014

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +1

Query: 40  ISIYFLRIKVNKNINKMSAWRQAGLTYINYSNI 138
           I++   ++K N N N+M+AW +A  T +NY NI
Sbjct: 69  INVNSTKLK-NHNYNEMTAWLKA--TRLNYPNI 98


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,238,092
Number of Sequences: 27780
Number of extensions: 149870
Number of successful extensions: 303
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 303
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)