Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_G02
         (871 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   4.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   4.1  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    22   7.2  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    22   7.2  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 696 PTPPLQIRYNNFHECLLSVIPIY 764
           P P L  RY+NF++   S++ ++
Sbjct: 38  PDPELLDRYDNFYQTTKSLLVLF 60


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 696 PTPPLQIRYNNFHECLLSVIPIY 764
           P P L  RY+NF++   S++ ++
Sbjct: 38  PDPELLDRYDNFYQTTKSLLVLF 60


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 416 TQRN*LGPSVSSSFLNNGNLLC 351
           TQ++ L    SS FL NG  LC
Sbjct: 52  TQQHGLPEVPSSRFLMNGKALC 73


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 416 TQRN*LGPSVSSSFLNNGNLLC 351
           TQ++ L    SS FL NG  LC
Sbjct: 52  TQQHGLPEVPSSRFLMNGKALC 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,360
Number of Sequences: 336
Number of extensions: 4972
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)