Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_G02
(871 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 63 4e-11
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 30 0.49
SPBC106.19 ||SPBC582.01|sequence orphan|Schizosaccharomyces pomb... 29 1.1
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 27 2.6
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 27 3.5
SPBC17G9.03c |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr... 27 4.6
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 27 4.6
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 6.1
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.0
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 8.0
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 26 8.0
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 26 8.0
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 63.3 bits (147), Expect = 4e-11
Identities = 40/130 (30%), Positives = 59/130 (45%)
Frame = +1
Query: 49 TQNPQTXXXXXXXXXXXXYMLPEQVLNHTMEIFTFMGSSVLRHDDAYSFQXXXXXXXXXX 228
T NPQ PE VL+ M IFTFMGS+VL DDA+S
Sbjct: 869 TNNPQIQNKALLLVSALANAAPEAVLHGVMPIFTFMGSTVLSRDDAFSIHVIEQTVKTVI 928
Query: 229 XXXVKLDKNIEDHTEKELQQLQNRVVPVLRIFADVVLHVPEHRRLPLFKKLLETLGPSQF 408
++L K+ + ++ F + H+P+HRRL L++ +L+T+G ++F
Sbjct: 929 SALIRLGKDFDSSL-------------LVSCFVNAFPHIPQHRRLRLYRLVLQTIGSNRF 975
Query: 409 LWVFLALLIE 438
L V L E
Sbjct: 976 LSVVLIQFAE 985
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.9 bits (64), Expect = 0.49
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 259 EDHTEKELQQLQN-RVVPVLRIFADVVLHVPEHRRLPLFKKLLETLG 396
E H E+ Q +Q+ + V+ FAD++ VP F + L+TLG
Sbjct: 424 EKHNERPEQNMQSSHELLVIEAFADLINSVPVEEIAEEFSRFLDTLG 470
>SPBC106.19 ||SPBC582.01|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 515
Score = 28.7 bits (61), Expect = 1.1
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = +1
Query: 250 KNIEDHTEKEL---QQLQNRVVPVLRIFADVVLHVPEHRRLPLFKKLLETLGPSQFLWVF 420
+ I++HTEK +L N+ P D++ EH +P ++L+ S L+
Sbjct: 44 QKIQNHTEKLKFFSSKLHNKGEPFTLQLGDLIT---EHTSVPELNEILDKFSQSNELFTM 100
Query: 421 LALLIETHIAHFNEPKKKDKRQSRTLADRESPLNRLDF 534
L + IAH N + +R A+ L+R+ F
Sbjct: 101 RFLEKASIIAHKNRSAELARRLRTYAANAMIDLSRVAF 138
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 27.5 bits (58), Expect = 2.6
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 340 HVPEHRRLPLFKKLLETLGPSQFLWV-FLALLIETHIAHFNEPKKKDKRQSRTLAD-RES 513
HVP+ + LPL K+L L P++ V LA + + +F + K + T+A+ RE
Sbjct: 321 HVPQEQELPLEKELPAAL-PTEIPGVGDLAFFKQEDVKYFGKLLKVEDEAKLTIAELRER 379
Query: 514 PLNRL 528
+ RL
Sbjct: 380 KILRL 384
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +1
Query: 322 FADVVLHVPEHRRLPLFKKLLETLGPSQFLWVFLALLIET 441
F +LH+ + L + KK+ F W+F +++ T
Sbjct: 453 FLQKLLHIRNTKELSMLKKIGFITAIGDFAWIFTTIIVTT 492
>SPBC17G9.03c |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 591
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 625 KDDESMETDIDPSEIFSVNGHTAIQLRHYK 714
K E D+DPS+ F T ++LR K
Sbjct: 61 KSSSKKEEDLDPSQYFENRSRTIMELRQTK 90
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 51 PEPSNSPSCIDPIVARSVHVARASSQS 131
P PSN P+ + P A S H SS S
Sbjct: 102 PHPSNQPAMLSPSTAASQHHHHHSSSS 128
>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1098
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 574 LENFIKLILYIRSLPIQKDDESMETDIDPSEIFSVNGH 687
+ F++L+L + P+ KDD +E I + + +GH
Sbjct: 738 IREFVQLLLENPNYPLPKDDHELEDMIHDEQQETKSGH 775
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2685
Score = 25.8 bits (54), Expect = 8.0
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 607 RSLPIQKDDESMETDIDPSEIF----SVNGHTAIQLRHYKYVIITFMNACLASSRF 762
RS ++K D ++E + S IF S+N H +Q+ + +++ T + A SRF
Sbjct: 658 RSQGMRKFDLNLELLMIKSIIFKNGKSLNSHLFLQIPNINFIVSTILRDNTAISRF 713
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 749 RHPDLSTTVVKLRFRKKWKLTT 814
+H DL+ TV + FRK KLT+
Sbjct: 68 KHDDLTATVPVIDFRKNQKLTS 89
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 372 EQW*PSVFGNMQDNVSKYTKHWDDSILKLLQFL 274
E W + ++ DN+ KY K+ IL +L+ L
Sbjct: 980 ENWTTCLHSSLVDNLGKYRKYDGSKILDILRVL 1012
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 25.8 bits (54), Expect = 8.0
Identities = 18/90 (20%), Positives = 37/90 (41%)
Frame = +1
Query: 445 IAHFNEPKKKDKRQSRTLADRESPLNRLDFGQNVVLEFPPEVCLENFIKLILYIRSLPIQ 624
+ FNEP +++ D ++ +N + + E V E+ ++ + + +
Sbjct: 204 VHEFNEPNDLRQQEESYSDDDDTNVNEFEDVNEIENEHQLSVADEDQTSRLVKGKMIFVG 263
Query: 625 KDDESMETDIDPSEIFSVNGHTAIQLRHYK 714
K+D E DI S NG + + +K
Sbjct: 264 KEDFGEEADISNSVFIEQNGPNSDTVSGFK 293
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,749,261
Number of Sequences: 5004
Number of extensions: 80077
Number of successful extensions: 246
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 434475230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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