Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_F22
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    26   0.35 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   1.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   1.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.9  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = -2

Query: 454 LIMFSTCEQTVLTAASSFLD--PNHFSTFRRRGFTMRMSTAKCLKFLL 317
           L+MFS  +    T         PN ++ F  + +T +    KC+K+L+
Sbjct: 11  LLMFSYTDNVSSTRTKYLRTNFPNFYNDFEVQRYTWKCENQKCVKYLV 58


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 137 IEKKCRKIW*TSVRLCFILALVF 205
           +EK+ R I+ TSV L F++ L+F
Sbjct: 121 LEKRNRHIFRTSVLLIFVMHLMF 143


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 137 IEKKCRKIW*TSVRLCFILALVF 205
           +EK+ R I+ TSV L F++ L+F
Sbjct: 121 LEKRNRHIFRTSVLLIFVMHLMF 143


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 207 LKTRASMKHNLTDVYQIFR 151
           +KT   M+H L  + Q++R
Sbjct: 602 IKTSPKMRHELQKLAQVYR 620


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,476
Number of Sequences: 336
Number of extensions: 3765
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)