Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_F21
         (370 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73975-1|CAA98276.1|  282|Caenorhabditis elegans Hypothetical pr...    27   4.2  
U00048-6|AAB53828.1|  873|Caenorhabditis elegans Hypothetical pr...    26   7.3  

>Z73975-1|CAA98276.1|  282|Caenorhabditis elegans Hypothetical
           protein T06E8.1 protein.
          Length = 282

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
 Frame = -2

Query: 240 LFILYNV--ICYYGNYRRSNYWYF 175
           LFILYN+  +C+Y  Y R +++YF
Sbjct: 16  LFILYNISTVCHY--YMRISFYYF 37


>U00048-6|AAB53828.1|  873|Caenorhabditis elegans Hypothetical
           protein C05D11.8 protein.
          Length = 873

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 3   IWSQLWDTKWPPPSVLFCRGRSGGDHR 83
           +W QL++TKW   S +  R  S  +H+
Sbjct: 25  VWEQLFETKWSVVSNILERKLSDPEHK 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,663,548
Number of Sequences: 27780
Number of extensions: 56665
Number of successful extensions: 189
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)