Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_F13
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0577 - 25158833-25162864                                         31   1.2  
11_06_0542 + 24777453-24777632,24777654-24778478,24778576-247793...    30   2.1  
06_01_0424 + 3041296-3041860,3042701-3042786,3042858-3043147,304...    29   4.9  
11_06_0550 + 24879074-24881290                                         28   8.6  

>11_06_0577 - 25158833-25162864
          Length = 1343

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = +2

Query: 695  VIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITHF---INNSPKTXIIDMVRTAL 865
            V+ +  C    K  H++  IC+++   K L LK   + H    INN  +  ++D +R A 
Sbjct: 870  VLDLEGCQSFDKNNHYLEDICNKVLLLKYLSLKDTNVAHLPNAINNLHELEVLD-IRQAK 928

Query: 866  IPYI 877
            +P I
Sbjct: 929  VPEI 932


>11_06_0542 + 24777453-24777632,24777654-24778478,24778576-24779319,
            24779422-24780354,24780456-24780938,24780969-24781082,
            24781240-24781636,24781732-24782024,24782392-24782802
          Length = 1459

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
 Frame = +2

Query: 677  DQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITHF---INNSPKTXIID 847
            +Q ++ V+ +  C    + QH++  IC+ +   K L L+   +T     INN  +  ++D
Sbjct: 1318 EQGEEEVLDLEGCQCFQRNQHYLKDICNNILLLKYLSLRRTDVTQLPSEINNLYELEVLD 1377

Query: 848  MVRTALIPY 874
            + +T +  Y
Sbjct: 1378 IWQTKVPEY 1386


>06_01_0424 +
           3041296-3041860,3042701-3042786,3042858-3043147,
           3043225-3043285,3043773-3043868,3044448-3044603,
           3044811-3044987
          Length = 476

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 731 LQHFVCPICHEMYTEKLL 784
           LQHF CPI HE+  + L+
Sbjct: 409 LQHFTCPISHEVMNDPLM 426


>11_06_0550 + 24879074-24881290
          Length = 738

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = +2

Query: 695 VIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITHF---INNSPKTXIIDMVRTAL 865
           V+ +  C    + QH++  IC+ +   K L L+   +T     INN  +  ++D+ +T +
Sbjct: 147 VLDLEGCQCFQRNQHYLKDICNNILLLKYLSLRRTDVTQLPSEINNLYELEVLDISQTEV 206

Query: 866 IPY 874
             Y
Sbjct: 207 PEY 209


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,551,628
Number of Sequences: 37544
Number of extensions: 331720
Number of successful extensions: 792
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)