Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_F13
(878 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0) 32 0.70
SB_41710| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_16971| Best HMM Match : zf-C2H2 (HMM E-Value=5.8e-36) 31 1.2
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 1.6
SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_12745| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_48551| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_10357| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-38) 29 3.7
SB_32903| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 5.0
SB_15832| Best HMM Match : zf-C2H2 (HMM E-Value=7e-35) 29 5.0
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 6.6
SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45) 28 8.7
SB_39387| Best HMM Match : Lipase_GDSL (HMM E-Value=0.038) 28 8.7
SB_36445| Best HMM Match : ASC (HMM E-Value=5.6e-05) 28 8.7
SB_34889| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 8.7
SB_31268| Best HMM Match : zf-C2H2 (HMM E-Value=5.04467e-44) 28 8.7
SB_35563| Best HMM Match : Keratin_B2 (HMM E-Value=3.3) 28 8.7
SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 8.7
SB_15895| Best HMM Match : Hint (HMM E-Value=1.4013e-45) 28 8.7
>SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITHFINN 823
C +C KK+ Q + V H+ T + F CP C + E KH+ + H N
Sbjct: 793 CNICNKKFTQSNSLVRHMRSHTG----KKFDCPECSRQFVESWWLKKHIELKHSSQN 845
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +2
Query: 650 SCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLR 802
SC C KK+ Q Y H + ++ ++C IC++ +T+ ++H+R
Sbjct: 764 SCEKCGKKFAQVASYCRHRKS---HDGIKDYLCNICNKKFTQSNSLVRHMR 811
>SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 31.9 bits (69), Expect = 0.70
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITHFINNSPK 832
C +C + + D H T + F CP+CH+ +++ KH+R H PK
Sbjct: 458 CNVCNRMFPGPSDLKAHRRTHTGE---KPFECPVCHKAFSQTGNLSKHVRYVHEKQQRPK 514
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/53 (20%), Positives = 28/53 (52%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITH 811
C +C +++ ++ + HI N + ++ C C+ + +K +H+R++H
Sbjct: 60 CSICDEEFHDWNALMTHIRNQKNNPEHKNS-CKECNVQFADKREKRRHVRVSH 111
>SB_41710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 650 SCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMY 769
+C C K+ + +V+HI CT N + +CPIC E Y
Sbjct: 3 TCDRCKKQVPGVN-FVMHIAHCTRNTE----ICPICGEFY 37
>SB_16971| Best HMM Match : zf-C2H2 (HMM E-Value=5.8e-36)
Length = 477
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITHFINNSPK 832
C LC + +D+ D IH+ ++ K + C +C + +++ KH+R+ H K
Sbjct: 277 CPLCDRSFDKRDRLRIHV--LHVHEKHRPHECHVCQKRFSQSSSLNKHMRV-HSGERPYK 333
Query: 833 TXIIDMVRTA 862
D TA
Sbjct: 334 CTFCDKAFTA 343
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 650 SCVLCTKKYDQYDDYVIHINE-CTMNVKLQHFVCPICHEMYTEKLLYLKHLR 802
SC C + +D ++ H+N C + + C +C + ++ Y H R
Sbjct: 882 SCASCKETFDSRENLDAHVNAGCPKKKPQETYTCEVCDKGFSRVSSYKTHFR 933
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +2
Query: 650 SCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRI 805
+C+ C + +Y +H N+C H+ C C ++Y L H +I
Sbjct: 302 TCIQCQVTFSTELEYTVHKNDCN-----SHYSCDECGKVYKTAKLLRTHAKI 348
Score = 29.5 bits (63), Expect = 3.7
Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 1/139 (0%)
Frame = +2
Query: 389 SSDQPLTKHH-EISDETDDSDVDSIKCVGCSQSYSTKGMHTCKTTCTIEQNDLQRSCSDE 565
S+ Q L +HH E++ E D KC C + + TK H KT + + S E
Sbjct: 952 SNRQSLIEHHREVTAEGD------FKCDVCEKCFITKA-HL-KTHKVVHTRQPRCSSCKE 1003
Query: 566 TLIANDCTQNMXXXXXXXXXXXXXFVNVSCVLCTKKYDQYDDYVIHINECTMNVKLQHFV 745
T + + + +C +C K + + Y H + + F
Sbjct: 1004 TFDSKENLKQHSSAGCPEKSSQEREA-YTCQVCDKAFSRVSSYKTHFRYHSKDSLT--FK 1060
Query: 746 CPICHEMYTEKLLYLKHLR 802
C C+E ++ + +KH R
Sbjct: 1061 CSHCNETFSNRQSLIKHQR 1079
>SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRI 805
C +C+K + Q D H K F C C + + K +Y HLRI
Sbjct: 403 CTICSKAFSQKGDLTRHSQNHENGKK---FFCKFCAKGFNRKDVYNVHLRI 450
>SB_12745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +2
Query: 650 SCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRI 805
+C+ C + +Y +H N+C H+ C C ++Y L H +I
Sbjct: 234 TCIQCQVTFSTELEYTVHKNDCN-----SHYSCDECGKVYKTAKLLRTHAKI 280
>SB_48551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 560
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRI 805
C LC + +++ D IH+ ++ K + C +C + +++ KH+R+
Sbjct: 354 CTLCDRSFEKRDRLRIHV--LHVHHKHRPHQCSVCSKRFSQSSSLNKHMRV 402
>SB_10357| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-38)
Length = 509
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRI 805
C C K + Q + H+ ++ K + F C ICH + + H+RI
Sbjct: 401 CPTCQKSFSQDANLKAHLR---VHSKEKPFKCHICHRRFAQSSSVTTHMRI 448
>SB_32903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 716 TMNVKLQHFVCPICHEMYTEKLLYLKHLRITHFINNSPK 832
T++V+ ++F C IC++ YT H R H I K
Sbjct: 408 TVHVEERNFPCEICNKAYTSDANLKAHKRSVHCIEKKHK 446
>SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1449
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +2
Query: 641 VNVSCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRI 805
++++C C + + D+Y H+ K+ VC C + + K +HLR+
Sbjct: 1180 LHLTCFRCGESFSDRDEYRSHLTTHRTGEKI---VCKYCGKSWLRKADLTRHLRV 1231
>SB_15832| Best HMM Match : zf-C2H2 (HMM E-Value=7e-35)
Length = 337
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +2
Query: 662 CTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITH 811
CTK + D H N +VK P C + YT+ KH + H
Sbjct: 122 CTKAFSNASDRAKHQNRTHSSVKPYVCKVPGCPKRYTDPSSLRKHTKTVH 171
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 650 SCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRI 805
+C C+K + ++ D V H+ T + F C C + +T +H+RI
Sbjct: 209 TCDFCSKAFGRHSDLVRHVRTHT---GARPFQCEHCPKAFTSSSNCSRHMRI 257
>SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45)
Length = 825
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 749 PICHEMYTEKLLYLKHLRITHFINNSPKTXIIDMVR 856
PIC E+ + KHLRI + N PKT + D+ +
Sbjct: 551 PICIRHKLERKKFNKHLRI-YAEKNKPKTIVADVAK 585
>SB_39387| Best HMM Match : Lipase_GDSL (HMM E-Value=0.038)
Length = 155
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 749 PICHEMYTEKLLYLKHLRITHFINNSPKTXIIDMVR 856
PIC E+ + KHLRI + N PKT + D+ +
Sbjct: 77 PICIRHKLERKKFNKHLRI-YAEKNKPKTIVADVAK 111
>SB_36445| Best HMM Match : ASC (HMM E-Value=5.6e-05)
Length = 897
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -2
Query: 163 SXTCVYLHISKGHNQXRXFNRCGLSKDGTECTKFXAETAFL 41
S +CV LH K NQ LSK +C K+ F+
Sbjct: 52 SSSCV-LHCEKSTNQQEELKNTDLSKPAEKCPKYYVPRKFI 91
>SB_34889| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 615
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITH 811
C C K Y+ + HI + +V + FVC C + + + +HL ++H
Sbjct: 555 CQWCPKTYENLEGLRRHIKQ---HVGDEKFVCEQCDKKFITAIQLKRHLWLSH 604
>SB_31268| Best HMM Match : zf-C2H2 (HMM E-Value=5.04467e-44)
Length = 454
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITH 811
C +C KK+ D + +E T + ++ F CP C +T+ KHLR H
Sbjct: 396 CPICNKKFA--DQSTVKKHERT-HTGIKPFTCPECGLKFTQIGNMNKHLRKKH 445
>SB_35563| Best HMM Match : Keratin_B2 (HMM E-Value=3.3)
Length = 138
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 671 KYDQYDD-YVIHINECTMNVKLQHFVCPICHEMYTE 775
K QY D Y + N +NV L H P+CH Y E
Sbjct: 2 KSPQYPDPYPLRRNGGYLNVILPHRRAPLCHACYRE 37
>SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 594
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/65 (23%), Positives = 30/65 (46%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITHFINNSPK 832
C C K++ + IH+N + + + C +C + + + L+HLR +H + K
Sbjct: 324 CETCGKRFSSQGSFKIHLNS---HGNEKPYSCDVCGKAFRLRGNMLQHLR-SHTLEKPYK 379
Query: 833 TXIID 847
+ D
Sbjct: 380 CALCD 384
>SB_15895| Best HMM Match : Hint (HMM E-Value=1.4013e-45)
Length = 561
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 749 PICHEMYTEKLLYLKHLRITHFINNSPKTXIIDMVR 856
PIC E+ + KHLRI + N PKT + D+ +
Sbjct: 287 PICIRHKLERKKFNKHLRI-YAEKNKPKTIVADVAK 321
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,008,784
Number of Sequences: 59808
Number of extensions: 448681
Number of successful extensions: 1206
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2502612210
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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