Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_F13
(878 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical pr... 36 0.038
AL132876-17|CAC48140.1| 934|Caenorhabditis elegans Hypothetical... 33 0.20
U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical p... 32 0.62
Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical pr... 32 0.62
Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical pr... 31 0.82
AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc ... 31 0.82
AF039047-12|AAM15590.1| 226|Caenorhabditis elegans Hypothetical... 31 0.82
Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical pr... 30 1.9
U50135-5|AAN63430.2| 346|Caenorhabditis elegans Hypothetical pr... 30 1.9
L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription f... 30 1.9
AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical ... 30 1.9
AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical ... 30 1.9
Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical pr... 30 2.5
M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein. 30 2.5
AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical ... 30 2.5
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 29 4.4
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 29 4.4
Z81068-1|CAB02982.1| 232|Caenorhabditis elegans Hypothetical pr... 29 5.8
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 29 5.8
Z68314-3|CAA92656.2| 334|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z37140-5|CAA85499.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z37140-4|CAA85498.1| 308|Caenorhabditis elegans Hypothetical pr... 28 7.7
AL032641-4|CAA21647.1| 454|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical
protein R06C7.9 protein.
Length = 729
Score = 42.3 bits (95), Expect = 4e-04
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 12/124 (9%)
Frame = +2
Query: 464 CVGCSQSYSTKG---MHTCKTTCTIEQNDLQRSC---SDETLIANDCTQN-----MXXXX 610
C GC+ S+++K H CK TI+ +R+ ++E + + Q+ +
Sbjct: 233 CDGCNTSFASKWHLEKHRCKENETIDDKKRRRTGRVNAEEIKVIKEEIQDEEFGGVVLSN 292
Query: 611 XXXXXXXXXFVNVSCVLCTKKYDQYDDYVIHINECTMNV-KLQHFVCPICHEMYTEKLLY 787
+CVLC KKY Y + H +C ++Q F C +C+ Y +
Sbjct: 293 ENHEKSKEDRFQFACVLCGKKYQHYHWLLKHRTKCLETTDEIQEFKCNVCYRRYNSSFWF 352
Query: 788 LKHL 799
+H+
Sbjct: 353 ERHM 356
>U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical
protein C09F5.3 protein.
Length = 359
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 647 VSCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPIC--HEMYTEKLLYLKHLRITH 811
V+C C ++ + + IH+ +V Q F CPIC + +K L+HL H
Sbjct: 119 VACQQCEDTFEDFAQFAIHMKSHLSSVTSQLFFCPICPVGTPFRDKKSQLEHLTTQH 175
>AL132876-17|CAC48140.1| 934|Caenorhabditis elegans Hypothetical
protein Y105E8A.21 protein.
Length = 934
Score = 33.5 bits (73), Expect = 0.20
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 647 VSCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPIC 757
V C++C K+Y + + HI+ C ++ LQ + C C
Sbjct: 218 VKCLVCDKEYTNHMSIIYHIDRCQVDKSLQPWKCWRC 254
>U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical
protein F47E1.3 protein.
Length = 594
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRI 805
C +C + +++ D IHI N + H VC +C + +++ KHLR+
Sbjct: 497 CTICNRSFEKRDRLRIHILHVHENHR-PH-VCSVCQKSFSQSSSLNKHLRV 545
>Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 31.9 bits (69), Expect = 0.62
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKL----QHFVCPICHEMYTEKLLYLKHLRITH 811
C LC K ++ Y +N + + +L + + CP C +T + L H++ H
Sbjct: 211 CQLCKKSISRHGQYANLLNHLSRHARLHASKKQYCCPKCGASFTRRYLASTHIKEVH 267
>Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 31.9 bits (69), Expect = 0.62
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKL----QHFVCPICHEMYTEKLLYLKHLRITH 811
C LC K ++ Y +N + + +L + + CP C +T + L H++ H
Sbjct: 211 CQLCKKSISRHGQYANLLNHLSRHARLHASKKQYCCPKCGASFTRRYLASTHIKEVH 267
>Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical
protein M04B2.1 protein.
Length = 870
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 740 FVCPICHEMYTEKLLYLKHLRITH 811
FVC IC EK YL+HL+ TH
Sbjct: 713 FVCEICDASVQEKEKYLQHLQTTH 736
>AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc
finger protein protein.
Length = 870
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 740 FVCPICHEMYTEKLLYLKHLRITH 811
FVC IC EK YL+HL+ TH
Sbjct: 713 FVCEICDASVQEKEKYLQHLQTTH 736
>AF039047-12|AAM15590.1| 226|Caenorhabditis elegans Hypothetical
protein K11D12.12 protein.
Length = 226
Score = 31.5 bits (68), Expect = 0.82
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLR 802
C C K++ + + H + C L F CPICH+ Y + H+R
Sbjct: 132 CRTCFKRFSRKFNLERHEDGCLPKPIL--FQCPICHQKYKRAPYFAAHIR 179
>Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHL 799
C C K + + HI + + L+ +CP C + YT++ KH+
Sbjct: 236 CNSCYKCFTDEQSLLDHIPKHKESKHLKIHICPFCGKSYTQQTYLQKHM 284
>Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHL 799
C C K + + HI + + L+ +CP C + YT++ KH+
Sbjct: 240 CNSCYKCFTDEQSLLDHIPKHKESKHLKIHICPFCGKSYTQQTYLQKHM 288
>Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHL 799
C C K + + HI + + L+ +CP C + YT++ KH+
Sbjct: 236 CNSCYKCFTDEQSLLDHIPKHKESKHLKIHICPFCGKSYTQQTYLQKHM 284
>Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHL 799
C C K + + HI + + L+ +CP C + YT++ KH+
Sbjct: 240 CNSCYKCFTDEQSLLDHIPKHKESKHLKIHICPFCGKSYTQQTYLQKHM 288
>U50135-5|AAN63430.2| 346|Caenorhabditis elegans Hypothetical
protein C52E12.6 protein.
Length = 346
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 641 VNVSCVLCTKKYDQYDDYVIH-INECTMNVKLQHFVCPICHEMYTEKLLYLKHLR 802
V+ C +C K Y H +NE N L CP CHE + + KH++
Sbjct: 143 VSSKCDICGKIYSAVSVLAEHMLNE--HNRYLDQIECPDCHEFFLTQTALQKHMK 195
>L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription
factor protein.
Length = 459
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHL 799
C C K + + HI + + L+ +CP C + YT++ KH+
Sbjct: 240 CNSCYKCFTDEQSLLDHIPKHKESKHLKIHICPFCGKSYTQQTYLQKHM 288
>AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHL 799
C C K + + HI + + L+ +CP C + YT++ KH+
Sbjct: 236 CNSCYKCFTDEQSLLDHIPKHKESKHLKIHICPFCGKSYTQQTYLQKHM 284
>AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHL 799
C C K + + HI + + L+ +CP C + YT++ KH+
Sbjct: 240 CNSCYKCFTDEQSLLDHIPKHKESKHLKIHICPFCGKSYTQQTYLQKHM 288
>Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical
protein F39B2.1 protein.
Length = 564
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/57 (26%), Positives = 22/57 (38%)
Frame = +2
Query: 641 VNVSCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITH 811
V SC C +K+ + H+ E N + C +C YT +HL H
Sbjct: 438 VMYSCKHCPEKFKWKKQLMKHMKEHDENFNPSPYTCHLCDRTYTTGFALGRHLTRQH 494
>M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein.
Length = 1110
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = +2
Query: 662 CTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITH 811
C K + D H N N+K P C + YT+ KH++ H
Sbjct: 313 CEKAFSNASDRAKHQNRTHSNLKPYSCQIPQCTKSYTDPSSLRKHIKAVH 362
>AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical
protein Y47D3A.6a protein.
Length = 1109
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = +2
Query: 662 CTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITH 811
C K + D H N N+K P C + YT+ KH++ H
Sbjct: 312 CEKAFSNASDRAKHQNRTHSNLKPYSCQIPQCTKSYTDPSSLRKHIKAVH 361
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 650 SCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITHFINNSP 829
+C+ C K++ H + ++ + F C ICH+ Y KH++ H ++P
Sbjct: 240 ACIECGKRFTTVTALSTH--KARVHSQSNRFECTICHKSYPVPSELRKHIKRVH-EKDAP 296
Query: 830 KT 835
K+
Sbjct: 297 KS 298
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 650 SCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITHFINNSP 829
+C+ C K++ H + ++ + F C ICH+ Y KH++ H ++P
Sbjct: 358 ACIECGKRFTTVTALSTH--KARVHSQSNRFECTICHKSYPVPSELRKHIKRVH-EKDAP 414
Query: 830 KT 835
K+
Sbjct: 415 KS 416
>Z81068-1|CAB02982.1| 232|Caenorhabditis elegans Hypothetical
protein F25H5.2 protein.
Length = 232
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 389 SSDQPLTKHHEISDETDDSDVDSIKCVGCSQSY-STKGMHTCKTTCTIEQNDLQRS 553
S DQP H ++D TDD + + C GC + G T T C Q + S
Sbjct: 53 SFDQP----HFVADPTDDFPEERVCCTGCQTLHIKLPGTDTNATLCCNPQTPYRHS 104
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/64 (26%), Positives = 25/64 (39%)
Frame = +2
Query: 644 NVSCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITHFINN 823
N C C KKY IH+ + T + + C C + Y++K+ H N
Sbjct: 355 NYECTFCNKKYPYASSLYIHMRKHT---EKSAYSCDGCGKPYSQKISLNIHQDQCEAFKN 411
Query: 824 SPKT 835
KT
Sbjct: 412 RLKT 415
>Z68314-3|CAA92656.2| 334|Caenorhabditis elegans Hypothetical
protein F07H5.10 protein.
Length = 334
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 545 VSRFVQLCRLFYMCAYPLCCMTDCTQR 465
VSRF +L F C Y LC + D Q+
Sbjct: 97 VSRFTELKTRFLCCRYVLCAIDDVMQK 123
>Z37140-5|CAA85499.1| 312|Caenorhabditis elegans Hypothetical
protein ZK899.6 protein.
Length = 312
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 647 VSCVLCTKKYDQYDDYVIHINECTMNVK 730
+ C C+ K+D ++ HI+EC N K
Sbjct: 33 LQCSDCSSKFDSEIPFIQHIDECLENAK 60
>Z37140-4|CAA85498.1| 308|Caenorhabditis elegans Hypothetical
protein ZK899.5 protein.
Length = 308
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 647 VSCVLCTKKYDQYDDYVIHINECTMNVK 730
+ C C+ K+D ++ HI+EC N K
Sbjct: 33 LQCSDCSSKFDSEIPFIQHIDECLENAK 60
>AL032641-4|CAA21647.1| 454|Caenorhabditis elegans Hypothetical
protein Y5F2A.4 protein.
Length = 454
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +2
Query: 653 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITHF 814
C C + + D V H C +K FVC C + +++ +H++ HF
Sbjct: 161 CDECGASFSRPADLVSHETSC---LKKFAFVCKPCDSYFRQRVQLDRHIKKAHF 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,877,253
Number of Sequences: 27780
Number of extensions: 341675
Number of successful extensions: 1044
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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