Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_E21
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   1.4  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.7  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/48 (22%), Positives = 23/48 (47%)
 Frame = +1

Query: 37  VLELNKVFYFVLTSFKHITSLPHVIVWYKMVKFGKNKFKALNKLTKRQ 180
           ++ LN   +F+   +  I      IV+Y      + +FK +N + K++
Sbjct: 24  LVPLNPYQFFLAVQYPRIVVSTFNIVFYMYTLILEERFKLINLIIKQE 71


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 482 HYFFFIRLSNNFVSLICV 429
           H FFF  +  +F++LI V
Sbjct: 73  HIFFFFAICCDFIALIVV 90


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 308 NFLTKLLFSEAASLSKTSF*NETF 237
           NFLT LLF E   +   ++  ET+
Sbjct: 249 NFLTNLLFWEFDQIVNVAYRMETW 272



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +2

Query: 524 NIKYKCFCIMEFIINIL 574
           +I + CF +M+ + N+L
Sbjct: 364 SIGFNCFWVMKLLYNVL 380


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,465
Number of Sequences: 336
Number of extensions: 1803
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)