Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_E20
         (852 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   3.6  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   4.7  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   4.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   6.2  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
 Frame = +3

Query: 468 TTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNA--PMIQVNDDYYE 641
           T P W  G  A L  I  +TN   GG+     +        GAC +A     +++ D  +
Sbjct: 82  TVPRWRNGIPATLTYISLDTN--RGGSPKLTPYPNWAQNKAGACGSAITTAYRIHADSCD 139

Query: 642 DLSVXDTKEI 671
            L V DT  I
Sbjct: 140 RLWVLDTGTI 149


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 662 KRNYQQIKEGREAQTWAQEWK 724
           K+   +I EG+E++T   +W+
Sbjct: 213 KKKEDEIDEGKESKTKLSQWR 233


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -2

Query: 341 R*PASTLSLCQIQ*RNHGTSLVTFRVNGQQSLYSLL 234
           R P S   L +++  N+G S    R  GQQ+ Y LL
Sbjct: 369 RAPNSETKLAEMR-DNYGISAGLNRTAGQQAAYQLL 403


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 607 AFTQAPKHSTSETENLPQGLLPPTSQFVSCLI 512
           AFTQA    T E ++LP G       F  C++
Sbjct: 186 AFTQASLAMTREEKHLPIGASVLFEIFPFCIV 217


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,627
Number of Sequences: 438
Number of extensions: 5527
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)