Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_E19
         (788 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    25   0.91 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.9  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   6.4  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    22   6.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.5  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -3

Query: 360 YVVTLVIENAVFNLLAAGSLDVYSS---GVLERPTQNL 256
           Y+   VIE +V N  AAG  DV  S   G+L   T  L
Sbjct: 327 YMAAQVIEKSVANFTAAGFFDVKRSTLFGILATTTTYL 364


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -2

Query: 766 YGEILFINMRVQAFDFKMKFYHITNFLRQYRFN 668
           +G   F  +    F      Y   +FLR+++FN
Sbjct: 601 FGSTPFKELTSNVFRMNQFVYDAIDFLREFQFN 633


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 509 LIDAKHFYLKIVSRVNIFFFKQFLVY 586
           L+D K  Y+ + S +N F+F  F V+
Sbjct: 280 LLDEKLSYIILTSFLNNFYFIIFQVF 305


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -2

Query: 634 VVNMYLFYADWHRLKQIYQELLK 566
           V+++++F  D HR  +IY +LLK
Sbjct: 85  VLHIHIF--DLHRNAEIYPDLLK 105


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 598 RLKQIYQELLKEKYID 551
           R+KQ+YQ+L   + +D
Sbjct: 496 RMKQVYQQLSNYRNVD 511


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,719
Number of Sequences: 336
Number of extensions: 4462
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)