Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_E19
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical pr... 38 0.006
U58734-6|AAB52505.3| 383|Caenorhabditis elegans Hypothetical pr... 37 0.019
AC025716-16|AAK39609.2| 917|Caenorhabditis elegans Hypothetical... 32 0.41
AF068721-1|AAC19263.1| 369|Caenorhabditis elegans Hypothetical ... 31 0.94
Z66523-4|CAA91413.1| 429|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81479-10|CAB03945.2| 324|Caenorhabditis elegans Hypothetical p... 28 6.6
AY552606-1|AAS89253.1| 324|Caenorhabditis elegans heparan sulfa... 28 6.6
Z81017-4|CAB02668.1| 181|Caenorhabditis elegans Hypothetical pr... 28 8.8
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical
protein F18A11.2 protein.
Length = 388
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 587 LLEAMPVRIKQIHVYNSPAYYDKLFSLVKPVLPQEICDMIKFHLE--IEGLYAHVDKKYL 760
L + P +++I + N+P++ + L P LP++ + I E I + H DK +L
Sbjct: 176 LFDHYPQLLQKIIIVNAPSFVNVLHQACSPFLPEDYKEKIVITSEPAIGAIQKHADKCFL 235
Query: 761 PVXLGGE 781
P LGG+
Sbjct: 236 PSDLGGD 242
>U58734-6|AAB52505.3| 383|Caenorhabditis elegans Hypothetical
protein T27A10.7 protein.
Length = 383
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/72 (22%), Positives = 36/72 (50%)
Frame = +2
Query: 497 GHIVLIDAKHFYLKIVSRVNIFFFKQFLVYLLEAMPVRIKQIHVYNSPAYYDKLFSLVKP 676
G I+++D F + ++ + + L L P ++I++ N PA ++++V P
Sbjct: 162 GVIIIMDLDGFSMDLLYTPTLKVYMSLLTMLQNIFPDFARRIYIINCPAMMSAVYAMVSP 221
Query: 677 VLPQEICDMIKF 712
VL + + ++F
Sbjct: 222 VLSSQTREKVRF 233
>AC025716-16|AAK39609.2| 917|Caenorhabditis elegans Hypothetical
protein Y39G10AR.5 protein.
Length = 917
Score = 32.3 bits (70), Expect = 0.41
Identities = 26/99 (26%), Positives = 46/99 (46%)
Frame = -2
Query: 508 HNVSSWEQRDVVEPVVCLHRECLQ*IVEFEPL*IRVVEFMYNNFVFTGFVCGDTRNRKCG 329
+ + +W + V P++ HR C IV F L + + +F+ ++ V + + G
Sbjct: 72 YKLYNWNAKKVYLPLLTFHRNC---IVAFS-LMLLLYQFIESDVVLCLY------SASWG 121
Query: 328 FQFACCRVSGRVQLWGIGATHAELVDALLRFFQTSVATV 212
F AC S RVQ+ T E++ L FF T + ++
Sbjct: 122 FLIACYIFSTRVQIASFVMTEDEVMCMLFIFFLTLMCSI 160
>AF068721-1|AAC19263.1| 369|Caenorhabditis elegans Hypothetical
protein ZK1055.5 protein.
Length = 369
Score = 31.1 bits (67), Expect = 0.94
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Frame = -2
Query: 763 GEILFINMR--VQAFDFKMKFYHITNFLRQYRFN---E*EQFVVV-SRAVVNMYLFYADW 602
G+I F+ R V FD K+ + ++Y +N FV V S+ N + DW
Sbjct: 62 GDISFLEFREEVLLFDMKLNLNFFSQLYKKYGYNLTIPTYPFVTVESKFPTNCTWEFTDW 121
Query: 601 HRLKQIYQELLKEKYIDTGHYLQIEVFRVDQHNVSSWEQRDVVEPV 464
+ + YI G + ++++N+ +W RDV+ V
Sbjct: 122 LEQQTRRTDRRPRAYIPDGEQRD---YLMNKYNIVTWHARDVLRLV 164
>Z66523-4|CAA91413.1| 429|Caenorhabditis elegans Hypothetical
protein M05D6.4 protein.
Length = 429
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 271 THAELVDALLRFFQTSVATVNEFFQQHVTKVLRQVILLSEPFSDQRNV 128
TH LVDA++R TV ++F++ + + P S+Q V
Sbjct: 193 THGWLVDAIVRRVDKKKRTVGQYFKEEIADKHNIDFYIGLPLSEQHRV 240
>Z81479-10|CAB03945.2| 324|Caenorhabditis elegans Hypothetical
protein C34F6.4 protein.
Length = 324
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 443 TFAMQADYWLNNIPLFPRGHIVLIDAKHFYLKIVSRVNI 559
TF W +P F GH+ ID + F + +NI
Sbjct: 90 TFVNNITTWTERLPAFYHGHVAFIDFQRFGIANPIYINI 128
>AY552606-1|AAS89253.1| 324|Caenorhabditis elegans heparan sulfate
2O-sulfotransferase protein.
Length = 324
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 443 TFAMQADYWLNNIPLFPRGHIVLIDAKHFYLKIVSRVNI 559
TF W +P F GH+ ID + F + +NI
Sbjct: 90 TFVNNITTWTERLPAFYHGHVAFIDFQRFGIANPIYINI 128
>Z81017-4|CAB02668.1| 181|Caenorhabditis elegans Hypothetical
protein F58A3.3 protein.
Length = 181
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 650 DKLFSLVKPVLPQEICDMIKFHLEIE 727
DK+F+ V+P+ P C + KF IE
Sbjct: 138 DKIFTSVRPIPPSSTCLLTKFFPRIE 163
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +3
Query: 552 SIYFSLSSSWYI---CLRRCQSA*NRYMFTTARLTTTNCSHSLNLYCLKKFVI**NFILK 722
S Y SLSS ++ R C S + LT T+ SHS + C F N L
Sbjct: 383 STYHSLSSKFFSENPSTRSCFSTWFSSSYNVQNLTMTSSSHSTHFQCCGAFK---NISLT 439
Query: 723 SKACTRMLI 749
++C L+
Sbjct: 440 GRSCPLFLL 448
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,666,510
Number of Sequences: 27780
Number of extensions: 406030
Number of successful extensions: 1119
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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