Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_E12
(908 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 421 e-119
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 210 3e-55
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 176 3e-45
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 160 2e-40
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 156 5e-39
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 151 1e-37
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 109 7e-25
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 106 4e-24
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 97 3e-21
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 95 2e-20
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 94 3e-20
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 93 7e-20
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 92 1e-19
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 85 1e-17
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 84 3e-17
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 83 5e-17
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 81 2e-16
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 77 3e-15
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 73 7e-14
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 70 4e-13
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 39 9e-04
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 32 0.13
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 32 0.13
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 32 0.13
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 31 0.17
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 31 0.17
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.30
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 30 0.39
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 30 0.39
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 30 0.39
SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyce... 29 0.69
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 2.1
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 28 2.1
SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomy... 27 2.8
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 27 2.8
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 27 3.7
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.7
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 27 3.7
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 27 4.9
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 4.9
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.4
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 26 6.4
SPBP23A10.12 |||FRG1 family protein|Schizosaccharomyces pombe|ch... 26 6.4
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 26 6.4
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 26 8.5
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 26 8.5
SPCC970.01 |rad16|rad10, rad20, swi9|DNA repair endonuclease XPF... 26 8.5
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 26 8.5
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 421 bits (1036), Expect = e-119
Identities = 196/254 (77%), Positives = 232/254 (91%), Gaps = 1/254 (0%)
Frame = +1
Query: 148 YEPPIPTRVGKKKRKAK-GPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQE 324
YEPP+PTR G++K+KA+ GPDA+ KLP V P TRCRL+LLK++RI D+LLMEEE+++NQE
Sbjct: 31 YEPPVPTRTGRRKKKAQSGPDASAKLPTVIPTTRCRLRLLKMQRIHDHLLMEEEYVQNQE 90
Query: 325 RLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQ 504
RLKPQ+E+ +EER++VD++RGTPMSVG LEEIIDD+HAIVST+ G E+YVSI+SFVDKD
Sbjct: 91 RLKPQDERTQEERNRVDEIRGTPMSVGTLEEIIDDDHAIVSTA-GPEYYVSIMSFVDKDM 149
Query: 505 LEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVEL 684
LEPGCSVLL+HK ++VG+L DDTDPM++VMKL+KAP E+YADIGGL++QIQEIKE+VEL
Sbjct: 150 LEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVEL 209
Query: 685 PLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANXTSATFLRVVGSELIQKYLGDG 864
PLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVAN TSATFLRVVGSELIQKYLGDG
Sbjct: 210 PLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 269
Query: 865 PXLVRELFRVAEEH 906
P LVR+LF AEEH
Sbjct: 270 PRLVRQLFNAAEEH 283
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 210 bits (512), Expect = 3e-55
Identities = 99/213 (46%), Positives = 149/213 (69%)
Frame = +1
Query: 268 LERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVS 447
LER + L ++E FI+ E K + ++ + +V ++ P+ +G E ID N AIV
Sbjct: 16 LERQLEMLDLQEGFIK--EDCKSLKRELIRAQEEVKRIQSVPLVIGQFLEAIDQNTAIVG 73
Query: 448 TSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETY 627
++ GS + V ILS +D++ L+P SV L +A+V +L + D +S+++ ++ P +Y
Sbjct: 74 STTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERPDVSY 133
Query: 628 ADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANXTS 807
AD+GGLD Q QE++E+VELPLT + Y ++GI PP+GV+LYGPPGTGKT+L KAVAN T+
Sbjct: 134 ADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTA 193
Query: 808 ATFLRVVGSELIQKYLGDGPXLVRELFRVAEEH 906
A F+RVVGSE +QKYLG+GP +VR++FR+A E+
Sbjct: 194 ANFIRVVGSEFVQKYLGEGPRMVRDVFRMAREN 226
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 176 bits (429), Expect = 3e-45
Identities = 88/216 (40%), Positives = 134/216 (62%), Gaps = 4/216 (1%)
Frame = +1
Query: 271 ERIKDYLLMEEEFIRNQERLKPQEEKIEEE----RSKVDDLRGTPMSVGNLEEIIDDNHA 438
++I+D L + +N RL+ Q + R ++ L+ VG + + + N
Sbjct: 22 QKIQDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQEPGSYVGEVIKTMGKNKV 81
Query: 439 IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQ 618
+V ++ V I +D +++P V L + + ++ +L + DP+VS+M +EK P
Sbjct: 82 LVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPD 141
Query: 619 ETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 798
TY +GGL+ QI+EIKE +ELP+ HPE +E +GI PKG++LYGPPGTGKTLLA+AVA+
Sbjct: 142 STYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAH 201
Query: 799 XTSATFLRVVGSELIQKYLGDGPXLVRELFRVAEEH 906
T F+RV GSEL+QKY+G+G +VRELF +A EH
Sbjct: 202 HTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREH 237
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 160 bits (389), Expect = 2e-40
Identities = 82/217 (37%), Positives = 127/217 (58%), Gaps = 4/217 (1%)
Frame = +1
Query: 268 LERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDD----LRGTPMSVGNLEEIIDDNH 435
LE+ K YLL E+ + L+ + ++ K +D L+ +G + + +D
Sbjct: 8 LEKYKSYLLQHREWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQLDSER 67
Query: 436 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAP 615
IV S G + V + VD+ L G V L+ ++ +L + DP+V M +E
Sbjct: 68 FIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPG 127
Query: 616 QETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA 795
++A +GGL+ QI+E++E +ELPL +PE + +GIKPPKGV+LYGPPGTGKTLLA+AVA
Sbjct: 128 DISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVA 187
Query: 796 NXTSATFLRVVGSELIQKYLGDGPXLVRELFRVAEEH 906
FL+VV S ++ KY+G+ ++RE+F A+EH
Sbjct: 188 ASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEH 224
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 156 bits (378), Expect = 5e-39
Identities = 74/162 (45%), Positives = 108/162 (66%)
Frame = +1
Query: 412 EEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVS 591
E+ + N +++ ++ VS+ V +E G V + +A+ L DP V+
Sbjct: 107 EQSAEKNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVT 166
Query: 592 VMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 771
+M++E+ P TY D+GG QI+ ++E VELPL PE + ++GI PPKG++LYGPPGTGK
Sbjct: 167 MMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGK 226
Query: 772 TLLAKAVANXTSATFLRVVGSELIQKYLGDGPXLVRELFRVA 897
TL A+AVAN T ATF+RV+GSEL+QKY+G+G +VRELF +A
Sbjct: 227 TLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMA 268
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 151 bits (366), Expect = 1e-37
Identities = 77/228 (33%), Positives = 131/228 (57%), Gaps = 21/228 (9%)
Frame = +1
Query: 283 DYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIID------------ 426
D +M+ EF R EKI+E + K+ + + P VGN+ EI+D
Sbjct: 49 DIKVMKSEFQRLTHEKSTMLEKIKENQEKISNNKMLPYLVGNVVEILDMQPDEVDVQESA 108
Query: 427 ---------DNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTD 579
A++ TS ++ ++ V+ ++L PG + +N + ++ L + D
Sbjct: 109 NQNSEATRVGKSAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYD 168
Query: 580 PMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 759
V M++++ P E Y+DIGGL QI+E+ E++ LP+ + + ++G+KPPKG +++GPP
Sbjct: 169 SRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPP 228
Query: 760 GTGKTLLAKAVANXTSATFLRVVGSELIQKYLGDGPXLVRELFRVAEE 903
GTGKTLLA+A A ++ATFL++ +L+Q ++GDG LVR+ F +A+E
Sbjct: 229 GTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKE 276
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 109 bits (261), Expect = 7e-25
Identities = 47/94 (50%), Positives = 68/94 (72%)
Frame = +1
Query: 625 YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANXT 804
Y DIGG Q+ +I+E VELPL HP+ ++ +GIKPP+G+++YGPPGTGKTL+A+AVAN T
Sbjct: 223 YDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANET 282
Query: 805 SATFLRVVGSELIQKYLGDGPXLVRELFRVAEEH 906
A F + G E++ K G+ +R+ F AE++
Sbjct: 283 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKN 316
Score = 98.3 bits (234), Expect = 1e-21
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 9/170 (5%)
Frame = +1
Query: 406 NLEEIIDDNHAIVSTSVGS-------EHYVSILSFVDKDQLEPGCSVL--LNHKVHAVVG 558
+LE+I + H V + + S + + +D D+ E VL L +
Sbjct: 415 DLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDNFRF 474
Query: 559 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKG 738
LG ++P + + P + DIGGL+ +E++E+V++P+ + E + G+ P KG
Sbjct: 475 ALGS-SNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKG 533
Query: 739 VILYGPPGTGKTLLAKAVANXTSATFLRVVGSELIQKYLGDGPXLVRELF 888
V+ +GPPGTGKTLLAKA+AN SA F+ V G EL+ + G+ VR++F
Sbjct: 534 VLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIF 583
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 106 bits (255), Expect = 4e-24
Identities = 46/99 (46%), Positives = 68/99 (68%)
Frame = +1
Query: 607 KAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAK 786
++P ++DIGG + Q++KESVE PLTH E + +G++PPKGV+LYGPPG KT+ AK
Sbjct: 541 ESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAK 600
Query: 787 AVANXTSATFLRVVGSELIQKYLGDGPXLVRELFRVAEE 903
A+A T F+ V G EL K++G+ VR++F+ A +
Sbjct: 601 AIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQ 639
Score = 96.3 bits (229), Expect = 5e-21
Identities = 42/95 (44%), Positives = 63/95 (66%)
Frame = +1
Query: 622 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANX 801
T++ IGGL QI +I++ VELP +PE ++ I PP+GV+LYGPPGTGKT++ +AVA
Sbjct: 277 TFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAE 336
Query: 802 TSATFLRVVGSELIQKYLGDGPXLVRELFRVAEEH 906
+A + G ++ KYLG+ +R++F A H
Sbjct: 337 ANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAH 371
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 97.1 bits (231), Expect = 3e-21
Identities = 46/94 (48%), Positives = 64/94 (68%)
Frame = +1
Query: 625 YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANXT 804
+AD+ G+D +EI E V+ L +P++YE +G K P+G IL GPPGTGKTLLAKA A
Sbjct: 295 FADVAGVDEAKEEIMEFVKF-LKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEA 353
Query: 805 SATFLRVVGSELIQKYLGDGPXLVRELFRVAEEH 906
+ FL V GSE ++ ++G GP VR+LF A ++
Sbjct: 354 NVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKN 387
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 94.7 bits (225), Expect = 2e-20
Identities = 46/107 (42%), Positives = 69/107 (64%)
Frame = +1
Query: 583 MVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPG 762
+ S + +EK P + DI GL+ + +KE+V LP+ P+ + G KP G++LYGPPG
Sbjct: 115 LTSAILVEK-PNVRWDDIAGLENAKEALKETVLLPIKLPQLFSH-GRKPWSGILLYGPPG 172
Query: 763 TGKTLLAKAVANXTSATFLRVVGSELIQKYLGDGPXLVRELFRVAEE 903
TGK+ LAKAVA +TF + S+L+ K++G+ LVR+LF +A E
Sbjct: 173 TGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMARE 219
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 93.9 bits (223), Expect = 3e-20
Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Frame = +1
Query: 571 DTDPMVSVMKLEKA------PQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPP 732
D D ++ ++ EK+ P+ + DIGGL+ ++++++LPL PE + + G+KP
Sbjct: 630 DVDVSINRIRKEKSNTIFTVPKVNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPR 688
Query: 733 KGVILYGPPGTGKTLLAKAVANXTSATFLRVVGSELIQKYLGDGPXLVRELFRVA 897
GV+LYGPPGTGKTLLAKAVA S F+ + G EL+ Y+G+ VR +F A
Sbjct: 689 SGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKA 743
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 92.7 bits (220), Expect = 7e-20
Identities = 41/91 (45%), Positives = 58/91 (63%)
Frame = +1
Query: 628 ADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANXTS 807
+DIGGLD I E+ E V +P+ HPE Y+ GI PP+GV+L+GPPG GKT+LA A+AN
Sbjct: 174 SDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELG 233
Query: 808 ATFLRVVGSELIQKYLGDGPXLVRELFRVAE 900
F+ + ++ G+ VRE+F A+
Sbjct: 234 VPFISISAPSIVSGMSGESEKKVREVFEEAK 264
Score = 91.9 bits (218), Expect = 1e-19
Identities = 41/92 (44%), Positives = 62/92 (67%)
Frame = +1
Query: 613 PQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 792
P ++ +IG L + E++ ++ P+ PE Y+ +GI P GV+L+GPPG GKTLLAKAV
Sbjct: 487 PGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAV 546
Query: 793 ANXTSATFLRVVGSELIQKYLGDGPXLVRELF 888
AN + A F+ + G EL+ KY+G+ VR++F
Sbjct: 547 ANESKANFISIRGPELLNKYVGESERAVRQVF 578
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 91.9 bits (218), Expect = 1e-19
Identities = 44/92 (47%), Positives = 60/92 (65%)
Frame = +1
Query: 625 YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANXT 804
++DI GLD +KE+V P PE ++ + +P +G++L+GPPGTGKT+LA+AVA
Sbjct: 378 WSDIAGLDDAKNSLKEAVIYPFLRPELFQGLR-EPVQGMLLFGPPGTGKTMLARAVATEA 436
Query: 805 SATFLRVVGSELIQKYLGDGPXLVRELFRVAE 900
ATF + S L KYLGD LVR LF VA+
Sbjct: 437 KATFFSISASSLTSKYLGDSEKLVRALFEVAK 468
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 85.0 bits (201), Expect = 1e-17
Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Frame = +1
Query: 622 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMG--IKPPKGVILYGPPGTGKTLLAKAVA 795
++ DIGG+D + ++ + V PL +PE ++ G + PKG++LYGPPG GKT+LAKA+A
Sbjct: 87 SFDDIGGMDEHVNQLLQDVLFPLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKALA 146
Query: 796 NXTSATFLRVVGSELIQKYLGDGPXLVRELFRVAEE 903
+ ATF+ V L K+ G+ LV LF +A +
Sbjct: 147 KQSQATFINVSVGLLTDKWFGESNKLVDALFTLARK 182
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 83.8 bits (198), Expect = 3e-17
Identities = 38/98 (38%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Frame = +1
Query: 622 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANX 801
++ +GGLD I ++KE V LPL +PE ++ ++PP+GV+ +GPPGTGKTL+A+A+A
Sbjct: 264 SFESVGGLDNYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAA 323
Query: 802 TSA-----TFLRVVGSELIQKYLGDGPXLVRELFRVAE 900
S+ +F G++ + K++G+ +R LF A+
Sbjct: 324 CSSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAK 361
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 83.0 bits (196), Expect = 5e-17
Identities = 41/100 (41%), Positives = 63/100 (63%)
Frame = +1
Query: 604 EKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 783
E+A ++D+ G+D +E++E V+ L P ++ +G K P+GV+L GPPGTGKT+LA
Sbjct: 259 ERAINVRFSDVQGVDEAKEELEEIVDF-LRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLA 317
Query: 784 KAVANXTSATFLRVVGSELIQKYLGDGPXLVRELFRVAEE 903
+AVA + F + GS+ + Y+G G VRELF A +
Sbjct: 318 RAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARK 357
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 81.0 bits (191), Expect = 2e-16
Identities = 37/91 (40%), Positives = 59/91 (64%)
Frame = +1
Query: 631 DIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANXTSA 810
DI GL+ +KE+V P P+ ++ + +P +G++L+GPPGTGKT+LA+AVA + +
Sbjct: 460 DISGLEFAKHSLKEAVVYPFLRPDLFQGLR-EPARGMLLFGPPGTGKTMLARAVATESRS 518
Query: 811 TFLRVVGSELIQKYLGDGPXLVRELFRVAEE 903
F + S L K+LG+ LVR LF +A++
Sbjct: 519 VFFSISASSLTSKFLGESEKLVRALFTLAKK 549
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 77.4 bits (182), Expect = 3e-15
Identities = 72/264 (27%), Positives = 116/264 (43%), Gaps = 17/264 (6%)
Frame = +1
Query: 157 PIPTRVGKKKRKAKGP----DAALKLPQVTPHTRC-------RLKLLKLERIKDYLLMEE 303
PIP+R G++KRK +GP L++ + R R KL + +Y L +
Sbjct: 208 PIPSRRGRRKRKMRGPILPVKKNLRVKKAMSPLRAERNSPDFRRKLRSRDNRPNYHLF-D 266
Query: 304 EFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSIL 483
+ P KI K+ + +G + D + +S SE +
Sbjct: 267 YYNEIASSPNPSTTKITYNPPKLPMKDFATLPIG-YQSTCDSDETSELSSTSSEQTSDVE 325
Query: 484 SFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQE 663
+ L G S + + + + D + S + IGGL+ I +
Sbjct: 326 GLNAYNNL--GASSDIENAPSSQLHFGHIDEKTIRSTDPFANRENLDFNSIGGLEDIILQ 383
Query: 664 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA------NXTSATFLRV 825
+KE V LPL +PE + + I PP+GV+ +GPPGTGKTL+A+ +A N + FLR
Sbjct: 384 LKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLR- 442
Query: 826 VGSELIQKYLGDGPXLVRELFRVA 897
GS+ + K++G+ +R LF A
Sbjct: 443 KGSDCLSKWVGEAERQLRLLFEEA 466
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 72.5 bits (170), Expect = 7e-14
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Frame = +1
Query: 634 IGGLDTQIQEI-KESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANXTSA 810
IGGLD++ I + + L P E++GI KG++LYGPPGTGKTL+A+ + +A
Sbjct: 271 IGGLDSEFSAIFRRAFASRLFPPGMVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNA 330
Query: 811 TFLRVV-GSELIQKYLGDGPXLVRELFRVAE 900
++V G E++ KY+G VR+LF AE
Sbjct: 331 REPKIVNGPEILNKYVGQSEENVRKLFADAE 361
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 70.1 bits (164), Expect = 4e-13
Identities = 30/92 (32%), Positives = 55/92 (59%)
Frame = +1
Query: 625 YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANXT 804
+ DI G+ + +++ +E P+ + Y++ ++ P G++L+G PG GKT LA A+++
Sbjct: 605 WIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTF 664
Query: 805 SATFLRVVGSELIQKYLGDGPXLVRELFRVAE 900
F+ + G EL+ KY+G VR+LF A+
Sbjct: 665 PVQFISIKGPELLDKYIGKSEQGVRDLFSRAQ 696
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 39.1 bits (87), Expect = 9e-04
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +1
Query: 643 LDTQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA 795
L++ +++ I + V L + ++Y+ GI +G +LYGPPG+GKT A+A
Sbjct: 212 LESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALA 263
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 733 KGVILYGPPGTGKTLLAKAVAN--XTSATFLRVVGSEL 840
KGV+ G GTGKT LA A+A F +VGSE+
Sbjct: 65 KGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEV 102
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 31.9 bits (69), Expect = 0.13
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 739 VILYGPPGTGKTLLAKAVANXTSATFLRV 825
+IL+G GTGKT LA+ +A T + F+ +
Sbjct: 123 MILWGSAGTGKTTLARLIAVTTKSRFIEI 151
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +1
Query: 733 KGVILYGPPGTGKTLLAKAVANXTSATFLRVVGSELIQKYLGD 861
K V+L GPPG GKT A VA L + S+ K L D
Sbjct: 410 KAVLLSGPPGIGKTTAAHLVAKLEGYDVLELNASDTRSKRLLD 452
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +1
Query: 724 KPPKGVILYGPPGTGKTLLAKAVAN---XTSATFLRVVGSELIQKY 852
+P + GP GTGKTLL KA+A+ +R+ SE ++K+
Sbjct: 612 QPIASFLFCGPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKH 657
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 31.5 bits (68), Expect = 0.17
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 718 GIKPPKGVILYGPPGTGKTLLAKAVANXTSATFLR 822
G K + L GPPG GKT + K++A+ + F R
Sbjct: 567 GTMQGKIMCLVGPPGVGKTSVGKSIASALNREFFR 601
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 30.7 bits (66), Expect = 0.30
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 250 RLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 429
R KLLKLE L+ ++E + + E K + E+ R + LR + + NL E+ID+
Sbjct: 664 RTKLLKLEESNKSLIKKQEDVDSLE--KNIQTLKEDLRKSEEALRFSKLEAKNLREVIDN 721
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 739 VILYGPPGTGKTLLAKAVANXT 804
+I+ G PGTGKT LA+ VA T
Sbjct: 11 IIICGTPGTGKTTLAEQVAETT 32
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 30.3 bits (65), Expect = 0.39
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 739 VILYGPPGTGKTLLAKAVANXTSATFLRVVGSEL--IQKYLG 858
+++ GP +GKT + + VA T F+R+ E +Q+Y+G
Sbjct: 897 ILIQGPTSSGKTSMIEYVAKKTGHKFVRINNHEHTDLQEYIG 938
Score = 29.5 bits (63), Expect = 0.69
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 733 KGVILYGPPGTGKTLLAKAVANXTSATFLRV 825
K ++L G PG GKT L A+A T +R+
Sbjct: 1560 KPILLEGSPGVGKTSLITALARETGHQLVRI 1590
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 30.3 bits (65), Expect = 0.39
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 727 PPKGVILYGPPGTGK-TLLAKAVANXTSATFLRVVG 831
PP V + GPPGTGK TL+ V + T ++ G
Sbjct: 73 PPVIVAVMGPPGTGKSTLIKSLVRRYSKYTISQITG 108
>SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 389
Score = 29.5 bits (63), Expect = 0.69
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 235 PHTRCRLKLLKLERIKDYLLM 297
PHT RLK K +IKDYL M
Sbjct: 55 PHTAIRLKERKANKIKDYLTM 75
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +1
Query: 724 KPPKGVILYGPPGTGKTLLAKAVAN---XTSATFLRVVGSELIQKY 852
+P + GP G GKT L KA+A T +R SE +K+
Sbjct: 530 RPLASFLFLGPTGVGKTALTKALAEFLFDTDKAMIRFDMSEFQEKH 575
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 733 KGVILYGPPGTGKTLLAKAVAN--XTSATFLRVVGSELIQKYLGDGPXLVREL 885
+ +++ GPP TGKT +A +A + F+ + SE+ + L++ L
Sbjct: 66 RAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEVYSLEMSKTEALLQAL 118
>SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 454
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 730 PKGVILYGPPGTGKTLL 780
PKG+ LYG G GKT L
Sbjct: 118 PKGIYLYGDVGCGKTAL 134
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 739 VILYGPPGTGKTLLAKAVA 795
++ YGPPGTGKT A A
Sbjct: 59 MLFYGPPGTGKTSTILACA 77
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 298 EEEFIRNQERLKPQEEKIEEERSKVDDLRGTPM 396
EE+ I ++E + EE++EEE + +D P+
Sbjct: 65 EEDIIDDEESAQVDEEELEEEEEEEEDATPEPV 97
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 3.7
Identities = 27/100 (27%), Positives = 39/100 (39%)
Frame = -1
Query: 839 SSDPTTRRKVADVWFATALARSVLPVPGGPYKMTPLGGLIPISS*YSGCVRGNSTDSLIS 660
SS T + + + S+ P G TP+ +P +S S + T S S
Sbjct: 156 SSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPT-STSS 214
Query: 659 WIWVSRPPMSA*VSCGAFSSFMTDTMGSVSSPKTPTTACT 540
S P + SC +S T S+S+P TPT T
Sbjct: 215 TDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPT 254
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 742 ILYGPPGTGKTLLAKAVA 795
++ GP G+GKT +AKAV+
Sbjct: 18 VVIGPAGSGKTTMAKAVS 35
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 692 HIRNTMKKWESNLPKESSCTVLRALVKHSWPRLLQTXHLLPSYVLLDLNLY 844
HI N ++W S +++ L + W + + P Y+ DL LY
Sbjct: 152 HIANWPQQWASYHATKAAVKHLARALAVEWAPFARVNSVSPGYIDTDLTLY 202
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 752 VLRALVKHSWPRLLQ-TXHLLPSYVLLDLNLYKNIWVMVPXWFVNCSVLLR 901
++ + +KH+ L + LLPS VL D YK++ +V W L++
Sbjct: 219 LILSTIKHAEENNLDLSVRLLPSKVLSDSEFYKSLSNLVNVWLKTTRSLIK 269
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 26.2 bits (55), Expect = 6.4
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 319 QERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVG-SEHYVSILSFVD 495
Q+R K EE + E+ ++ L+ S + EE+ + + V S+HY +L ++
Sbjct: 1749 QKRRKELEEFMSSEQERIGFLKSQLESNNDSEEVRQEYEELTKRIVTLSDHY-RLLEYLL 1807
Query: 496 KDQLEPGCS 522
KD E CS
Sbjct: 1808 KD--ESSCS 1814
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 698 RNTMKKWESNLPKESSCTVLRALVKHSWPRLLQTXH 805
+NT+ E+N P S+ + +L+ S P L T H
Sbjct: 505 KNTILSNENNTPNYSNVCLSTSLINRSLPSLKSTMH 540
>SPBP23A10.12 |||FRG1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 245
Score = 26.2 bits (55), Expect = 6.4
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 165 YTSW*KEKES*GTRCGSQASASHASYKMSTQVVKTRKNKGLFVDGRGVHP*SRTLEA-TG 341
Y + +EK+ C S A +++ Q +KNK D +H SR LE+ G
Sbjct: 151 YLTLSREKQDQAIACVSDTVIPEAKWRIRVQTRFLKKNKSSLFDNPTIH--SRQLESMAG 208
Query: 342 RE 347
R+
Sbjct: 209 RK 210
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 742 ILYGPPGTGKTLLAKAV 792
++ GPPGTGKT+ + +V
Sbjct: 411 LIQGPPGTGKTVTSASV 427
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 8.5
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 265 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLR---GTPMSVGNLEEIIDDNH 435
KL + D MEEEF+ + + + EK SK L+ + + G L+E++ +N
Sbjct: 166 KLSGLDDSSFMEEEFVWQVDNVLQECEKKFTPHSKGSYLKENLKSELRKGRLDELMCENT 225
Query: 436 AI 441
A+
Sbjct: 226 AL 227
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 739 VILYGPPGTGKT-LLAKAVANXTSATFLRVVGSELIQKYLGDG 864
++L GP GTGK+ LL + V N VG + + + G
Sbjct: 12 IVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVG 54
>SPCC970.01 |rad16|rad10, rad20, swi9|DNA repair endonuclease
XPF|Schizosaccharomyces pombe|chr 3|||Manual
Length = 892
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +1
Query: 220 LPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMS 399
L VT + LK + ++ DY E++ + + +K E E E S +G P S
Sbjct: 408 LSTVTYDNKDSLKNMN-SKLVDYFQWREQYRKMSKSIKKPEPSKEREASNTTSRKGVPPS 466
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 256 KLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKV 372
K+L+ +R+ M E IRN K Q+E I ++ +++
Sbjct: 1190 KILRYQRLTKEYEMRAEQIRNDYAAKCQDEPIPDDEARL 1228
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,613,492
Number of Sequences: 5004
Number of extensions: 75138
Number of successful extensions: 321
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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