Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_E08
(630 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC055313-1|AAH55313.1| 76|Homo sapiens TP53 regulated inhibito... 87 6e-17
BC002638-1|AAH02638.1| 76|Homo sapiens TP53 regulated inhibito... 87 6e-17
AL021546-2|CAA16495.1| 76|Homo sapiens protein ( Human DNA seq... 87 6e-17
U75688-1|AAR00584.1| 66|Homo sapiens WF-1 protein. 67 4e-11
BC125232-1|AAI25233.1| 1500|Homo sapiens ABCA6 protein protein. 31 2.5
BC125231-1|AAI25232.1| 1500|Homo sapiens ABCA6 protein protein. 31 2.5
AY028898-1|AAK30023.1| 1617|Homo sapiens ATP-binding cassette A6... 31 2.5
AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6 p... 31 2.5
AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6 p... 31 2.5
BC108310-1|AAI08311.1| 376|Homo sapiens WW domain binding prote... 31 4.5
BC104879-1|AAI04880.1| 376|Homo sapiens WW domain-containing bi... 31 4.5
AL157877-5|CAI13223.1| 376|Homo sapiens WW domain binding prote... 31 4.5
AF071185-1|AAC34811.1| 376|Homo sapiens formin binding protein ... 31 4.5
>BC055313-1|AAH55313.1| 76|Homo sapiens TP53 regulated inhibitor
of apoptosis 1 protein.
Length = 76
Score = 86.6 bits (205), Expect = 6e-17
Identities = 32/63 (50%), Positives = 47/63 (74%)
Frame = +2
Query: 188 MNSIGEECTDLKKKYDDCFNTWFSERFLKGDQDDSVCAGIFKIYQECVKNAMKQQSIDFK 367
MNS+GE CTD+K++YD CFN WF+E+FLKGD C +FK YQ+CV+ A+K++ I +
Sbjct: 1 MNSVGEACTDMKREYDQCFNRWFAEKFLKGDSSGDPCTDLFKRYQQCVQKAIKEKEIPIE 60
Query: 368 EID 376
++
Sbjct: 61 GLE 63
>BC002638-1|AAH02638.1| 76|Homo sapiens TP53 regulated inhibitor
of apoptosis 1 protein.
Length = 76
Score = 86.6 bits (205), Expect = 6e-17
Identities = 32/63 (50%), Positives = 47/63 (74%)
Frame = +2
Query: 188 MNSIGEECTDLKKKYDDCFNTWFSERFLKGDQDDSVCAGIFKIYQECVKNAMKQQSIDFK 367
MNS+GE CTD+K++YD CFN WF+E+FLKGD C +FK YQ+CV+ A+K++ I +
Sbjct: 1 MNSVGEACTDMKREYDQCFNRWFAEKFLKGDSSGDPCTDLFKRYQQCVQKAIKEKEIPIE 60
Query: 368 EID 376
++
Sbjct: 61 GLE 63
>AL021546-2|CAA16495.1| 76|Homo sapiens protein ( Human DNA
sequence from clone XX-15E1 on chromosome 12. ).
Length = 76
Score = 86.6 bits (205), Expect = 6e-17
Identities = 32/63 (50%), Positives = 47/63 (74%)
Frame = +2
Query: 188 MNSIGEECTDLKKKYDDCFNTWFSERFLKGDQDDSVCAGIFKIYQECVKNAMKQQSIDFK 367
MNS+GE CTD+K++YD CFN WF+E+FLKGD C +FK YQ+CV+ A+K++ I +
Sbjct: 1 MNSVGEACTDMKREYDQCFNRWFAEKFLKGDSSGDPCTDLFKRYQQCVQKAIKEKEIPIE 60
Query: 368 EID 376
++
Sbjct: 61 GLE 63
>U75688-1|AAR00584.1| 66|Homo sapiens WF-1 protein.
Length = 66
Score = 67.3 bits (157), Expect = 4e-11
Identities = 24/53 (45%), Positives = 38/53 (71%)
Frame = +2
Query: 218 LKKKYDDCFNTWFSERFLKGDQDDSVCAGIFKIYQECVKNAMKQQSIDFKEID 376
+K++YD CFN WF+E+FLKGD C +FK YQ+CV+ A+K++ I + ++
Sbjct: 1 MKREYDQCFNRWFAEKFLKGDSSGDPCTDLFKRYQQCVQKAIKEKEIPIEGLE 53
>BC125232-1|AAI25233.1| 1500|Homo sapiens ABCA6 protein protein.
Length = 1500
Score = 31.5 bits (68), Expect = 2.5
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Frame = -3
Query: 589 TRNFISFNTFI--FLFHCKPIITEILVTAWNLKKLAKDIATGCGFKDTDQFGLSATICIW 416
T+N + FI FL H P++ I + +K +K++ G +D+ F LS + I+
Sbjct: 214 TKNLLHNEMFILFFLLHFSPLVYFISLNVTKERKKSKNLMKMMGLQDS-AFWLSWGL-IY 271
Query: 415 WCFVFIFSA-*DILIYFFEINALLFHCILNTFLINFKYSSANRIILIAF*EPFREPSIET 239
F+FI S I+I F +I + ++ F++ F Y + ++ ++ +
Sbjct: 272 AGFIFIISIFITIIITFTQIIVMTGFMVI--FILFFLYGLSLVALVFLMSVLLKKAVLTN 329
Query: 238 IIVFFL 221
++VF L
Sbjct: 330 LVVFLL 335
>BC125231-1|AAI25232.1| 1500|Homo sapiens ABCA6 protein protein.
Length = 1500
Score = 31.5 bits (68), Expect = 2.5
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Frame = -3
Query: 589 TRNFISFNTFI--FLFHCKPIITEILVTAWNLKKLAKDIATGCGFKDTDQFGLSATICIW 416
T+N + FI FL H P++ I + +K +K++ G +D+ F LS + I+
Sbjct: 214 TKNLLHNEMFILFFLLHFSPLVYFISLNVTKERKKSKNLMKMMGLQDS-AFWLSWGL-IY 271
Query: 415 WCFVFIFSA-*DILIYFFEINALLFHCILNTFLINFKYSSANRIILIAF*EPFREPSIET 239
F+FI S I+I F +I + ++ F++ F Y + ++ ++ +
Sbjct: 272 AGFIFIISIFITIIITFTQIIVMTGFMVI--FILFFLYGLSLVALVFLMSVLLKKAVLTN 329
Query: 238 IIVFFL 221
++VF L
Sbjct: 330 LVVFLL 335
>AY028898-1|AAK30023.1| 1617|Homo sapiens ATP-binding cassette A6
protein.
Length = 1617
Score = 31.5 bits (68), Expect = 2.5
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Frame = -3
Query: 589 TRNFISFNTFI--FLFHCKPIITEILVTAWNLKKLAKDIATGCGFKDTDQFGLSATICIW 416
T+N + FI FL H P++ I + +K +K++ G +D+ F LS + I+
Sbjct: 214 TKNLLHNEMFILFFLLHFSPLVYFISLNVTKERKKSKNLMKMMGLQDS-AFWLSWGL-IY 271
Query: 415 WCFVFIFSA-*DILIYFFEINALLFHCILNTFLINFKYSSANRIILIAF*EPFREPSIET 239
F+FI S I+I F +I + ++ F++ F Y + ++ ++ +
Sbjct: 272 AGFIFIISIFITIIITFTQIIVMTGFMVI--FILFFLYGLSLVALVFLMSVLLKKAVLTN 329
Query: 238 IIVFFL 221
++VF L
Sbjct: 330 LVVFLL 335
>AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6
protein.
Length = 1617
Score = 31.5 bits (68), Expect = 2.5
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Frame = -3
Query: 589 TRNFISFNTFI--FLFHCKPIITEILVTAWNLKKLAKDIATGCGFKDTDQFGLSATICIW 416
T+N + FI FL H P++ I + +K +K++ G +D+ F LS + I+
Sbjct: 214 TKNLLHNEMFILFFLLHFSPLVYFISLNVTKERKKSKNLMKMMGLQDS-AFWLSWGL-IY 271
Query: 415 WCFVFIFSA-*DILIYFFEINALLFHCILNTFLINFKYSSANRIILIAF*EPFREPSIET 239
F+FI S I+I F +I + ++ F++ F Y + ++ ++ +
Sbjct: 272 AGFIFIISIFVTIIITFTQIIVMTGFMVI--FILFFLYGLSLVALVFLMSVLLKKAVLTN 329
Query: 238 IIVFFL 221
++VF L
Sbjct: 330 LVVFLL 335
>AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6
protein.
Length = 1617
Score = 31.5 bits (68), Expect = 2.5
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Frame = -3
Query: 589 TRNFISFNTFI--FLFHCKPIITEILVTAWNLKKLAKDIATGCGFKDTDQFGLSATICIW 416
T+N + FI FL H P++ I + +K +K++ G +D+ F LS + I+
Sbjct: 214 TKNLLHNEMFILFFLLHFSPLVYFISLNVTKERKKSKNLMKMMGLQDS-AFWLSWGL-IY 271
Query: 415 WCFVFIFSA-*DILIYFFEINALLFHCILNTFLINFKYSSANRIILIAF*EPFREPSIET 239
F+FI S I+I F +I + ++ F++ F Y + ++ ++ +
Sbjct: 272 AGFIFIISIFVTIIITFTQIIVMTGFMVI--FILFFLYGLSLVALVFLMSVLLKKAVLTN 329
Query: 238 IIVFFL 221
++VF L
Sbjct: 330 LVVFLL 335
>BC108310-1|AAI08311.1| 376|Homo sapiens WW domain binding protein
4 (formin binding protein 21) protein.
Length = 376
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 341 MKQQSIDFKEIDKDILGTENEYKTPPNANSS*QPKLV 451
+KQ+ +E+D ++ TENEY + A+ +PK+V
Sbjct: 300 IKQEVESHEEVDLELPSTENEYVSTSEADGGGEPKVV 336
>BC104879-1|AAI04880.1| 376|Homo sapiens WW domain-containing
binding protein 4 protein.
Length = 376
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 341 MKQQSIDFKEIDKDILGTENEYKTPPNANSS*QPKLV 451
+KQ+ +E+D ++ TENEY + A+ +PK+V
Sbjct: 300 IKQEVESHEEVDLELPSTENEYVSTSEADGGGEPKVV 336
>AL157877-5|CAI13223.1| 376|Homo sapiens WW domain binding protein
4 (formin binding protein 21) protein.
Length = 376
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 341 MKQQSIDFKEIDKDILGTENEYKTPPNANSS*QPKLV 451
+KQ+ +E+D ++ TENEY + A+ +PK+V
Sbjct: 300 IKQEVESHEEVDLELPSTENEYVSTSEADGGGEPKVV 336
>AF071185-1|AAC34811.1| 376|Homo sapiens formin binding protein 21
protein.
Length = 376
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 341 MKQQSIDFKEIDKDILGTENEYKTPPNANSS*QPKLV 451
+KQ+ +E+D ++ TENEY + A+ +PK+V
Sbjct: 300 IKQEVESHEEVDLELPSTENEYVSTSEADGGGEPKVV 336
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,920,897
Number of Sequences: 237096
Number of extensions: 1790901
Number of successful extensions: 3215
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3215
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -