Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_E01
(748 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor Mc... 52 7e-08
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 50 5e-07
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 44 3e-05
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 41 2e-04
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 41 2e-04
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 41 2e-04
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 40 4e-04
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 39 7e-04
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 39 9e-04
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 37 0.004
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 36 0.005
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 36 0.006
SPCC16C4.08c |skb15||Shk1 kinase binding protein 15|Schizosaccha... 35 0.011
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 34 0.025
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 33 0.033
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 33 0.057
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 33 0.057
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 33 0.057
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 32 0.100
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 31 0.13
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 31 0.17
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 31 0.17
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 31 0.17
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 31 0.23
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 31 0.23
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 30 0.40
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 30 0.40
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 30 0.40
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 30 0.40
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 30 0.40
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 29 0.53
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 29 0.53
SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces p... 29 0.70
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 29 0.70
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 29 0.70
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 29 0.70
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 29 0.93
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 29 0.93
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 28 1.2
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 28 1.2
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 27 2.1
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 27 2.8
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 27 2.8
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 27 2.8
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 27 3.8
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 27 3.8
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 26 5.0
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 25 8.7
SPCC63.06 |||human WDR89 family WD repeat protein|Schizosaccharo... 25 8.7
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 25 8.7
>SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor
Mcl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 52.4 bits (120), Expect = 7e-08
Identities = 31/165 (18%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Frame = +3
Query: 186 RYAHAEGHTDVCYTEDGRNIITCGHDGDVRIWMDIEDDDPNS-HCVGESVLAVCYKDKRL 362
RYAH +G T + YT DG+ ++T G + +R + D++P+S + + + +
Sbjct: 9 RYAHTDGLTRLAYTRDGKFLLTVGSNQVIRKFQVGSDEEPDSIDNHQDPITGIAVAENYF 68
Query: 363 YVATDNHLVQAYTFPDFDKDGIVTRFTAAVTQIKSSCKIEALGCCSENMEAKICNVEGGA 542
+++ V Y + ++ R T + + S + S+ K+ + +
Sbjct: 69 CTCSEDATVCVYPIDSPTEHTLLARTTLPIRDVAYSVDGNWIAIASDETAVKVVSSTDSS 128
Query: 543 PIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVK 677
IF + K + P+ + + + +G++ +D T +++K
Sbjct: 129 QIFSLRPAKASNKHVTYSPNGNFLAVSSCNGILYFYDTQTRELIK 173
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 49.6 bits (113), Expect = 5e-07
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 7/172 (4%)
Frame = +3
Query: 189 YAHAEGHTDVCYTEDGRNIITCGHDGDVRIWMDIE---DDDPNSHCVGESVLAVCYKDKR 359
+ H + T V + + R I T DG ++IW + + H G S + K
Sbjct: 51 FGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKY 110
Query: 360 LYVATDNHLVQAYTFPDFDKDGIVTRFTAAVTQIKSSCKIEALGCC----SENMEAKICN 527
L A+D+ ++ + DF+K V R T SS LG S + +I N
Sbjct: 111 LASASDDKTIRIW---DFEKRCSV-RCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWN 166
Query: 528 VEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVKEI 683
++ G + ++ H P++S++I +TA DG+ RIWD+ + + +K +
Sbjct: 167 LQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTL 218
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 43.6 bits (98), Expect = 3e-05
Identities = 39/175 (22%), Positives = 78/175 (44%), Gaps = 7/175 (4%)
Frame = +3
Query: 192 AHAEGHTDVCYTEDGRNIITCGHDGDVRIWMDIEDD----DPNSHCVGESVLAVCYKDKR 359
+H + + + Y+ DG+ IIT DG +++W D+ H S L +
Sbjct: 337 SHYDALSTLQYSSDGQRIITGADDGKIKVW-DMNSGFCIVTFTQHTSAVSGLCFSKRGNV 395
Query: 360 LYVATDNHLVQAYT---FPDFDKDGIVTRFTAAVTQIKSSCKIEALGCCSENMEAKICNV 530
L+ ++ + V+A+ + +F +R + + S +I G ++ E + +V
Sbjct: 396 LFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGS-QDSFEIFMWSV 454
Query: 531 EGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVKEINCVP 695
+ G + ++ H+GPV SL+ ++ D +RIWDI + + E +P
Sbjct: 455 QTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIP 509
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 41.1 bits (92), Expect = 2e-04
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Frame = +3
Query: 351 DKRLYVATDNHLVQAYTFPDFDKDGIVTRFTAAVTQIKSSCKIEALGCCSENMEAKICNV 530
D L V + L +AYTF D ++ A + I S C I + ++C++
Sbjct: 125 DHTLKVWDVSTLQEAYTFTMEDMI-----YSHAWSPIASHCLIAT---AYRSSSIRLCDM 176
Query: 531 EGGAPIFVMSNHKGPVLSLAICPHMKYA-STACGDGLMRIWDIDTXKVVKEINCVPKINT 707
+ G+ +S H G VL++ CP ++ ++ DG R+WDI KV C+ N
Sbjct: 177 QSGSYTHSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDI--RKVSSSFACMDLHNK 234
Query: 708 F 710
+
Sbjct: 235 Y 235
Score = 28.7 bits (61), Expect = 0.93
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +3
Query: 159 NMKIESKPLRYAHAEGHTDVCYTEDGRNIITCGHDGDVRIW 281
N + S +H + +T D R + +CG D +R+W
Sbjct: 233 NKYLPSNQTNISHYGTVNGLAWTSDARYLASCGTDDRIRVW 273
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 41.1 bits (92), Expect = 2e-04
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 504 NMEAKICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXK 668
N + + + P+ M H+GPV LA+ +Y TA D L+++WD+ T K
Sbjct: 244 NGQVTLWSPSSTTPLVKMLTHRGPVRDLAVNRDGRYMVTAGADSLLKVWDLRTYK 298
Score = 25.4 bits (53), Expect = 8.7
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +3
Query: 213 DVCYTEDGRNIITCGHDGDVRIW 281
D+ DGR ++T G D +++W
Sbjct: 270 DLAVNRDGRYMVTAGADSLLKVW 292
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +3
Query: 498 SENMEAKICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVK 677
S + A++ +VE AP+ V H+ V ++ P+ Y +T D R+WD+ T V+
Sbjct: 464 SHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVR 523
Query: 678 EIN 686
N
Sbjct: 524 VFN 526
Score = 32.3 bits (70), Expect = 0.076
Identities = 40/170 (23%), Positives = 64/170 (37%), Gaps = 8/170 (4%)
Frame = +3
Query: 171 ESKPLRYA-HAEGHTDVCYTEDGRNIITCGHDGDVRIWMDIEDDDPNSHCVG--ESVLAV 341
+S ++YA H DV ++ G T HD R+W D+E P VG V V
Sbjct: 435 KSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLW-DVEHAAPLRVFVGHQNDVDCV 493
Query: 342 CYKDKRLYVAT--DNHLVQAYTFPDFDKDGIVTRFTAAVTQIKSSCKIE---ALGCCSEN 506
+ Y+AT +H + + D G V F A + + + C +L E+
Sbjct: 494 SFHPNAAYLATGSSDHTTRMW---DVRTGGTVRVFNAHHSPVSALCMSADGLSLASADES 550
Query: 507 MEAKICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDI 656
K+ ++ H V SL+ K + D + WD+
Sbjct: 551 GIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFWDL 600
Score = 30.3 bits (65), Expect = 0.30
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 564 HKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVV 674
H PV ++I P ++ + DG R+W DT +
Sbjct: 402 HTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTI 438
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +3
Query: 498 SENMEAKICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVK 677
S + ++ +V G + V + H PV ++AI P ++A +GL+ +WDI T + +K
Sbjct: 482 SSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIK 541
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 495 CSENMEAKICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDID 659
CSE+ A++ +V+ + H GPV +A P Y +TA D ++W D
Sbjct: 397 CSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCD 451
Score = 32.3 bits (70), Expect = 0.076
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 516 KICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDT 662
K +VE + +H GPV P KY + D R+W +DT
Sbjct: 362 KSTSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDT 410
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 39.1 bits (87), Expect = 7e-04
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 24/185 (12%)
Frame = +3
Query: 201 EGHTDVCYT----EDGRNIITCGHDGDVRIW-MDIEDDDPN------SHCVGESVLAVCY 347
EGHTD+ T EDG + T D VR+W ++IED+ H + +A+
Sbjct: 361 EGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGP 420
Query: 348 KDKRLYV-----ATDNHLVQAYTF------PDFDKDGIVT--RFTAAVTQIKSSCKIEAL 488
D Y ++ + ++ + DF + T V I+ S +
Sbjct: 421 LDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRII 480
Query: 489 GCCSENMEAKICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXK 668
S++ K+ + G + V+ H+ V + + P + ++ GD +RIW++DT +
Sbjct: 481 ASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQ 540
Query: 669 VVKEI 683
V+ +
Sbjct: 541 CVQTL 545
Score = 34.3 bits (75), Expect = 0.019
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 519 ICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDI 656
I + G I M H+ PV+++ I P +T +GL+++WDI
Sbjct: 87 IYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDI 132
Score = 31.1 bits (67), Expect = 0.17
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +3
Query: 516 KICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVKEIN 686
+I NV+ + + H G +L L +A DGL+++W + + + V ++
Sbjct: 532 RIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLD 588
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 38.7 bits (86), Expect = 9e-04
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 3/194 (1%)
Frame = +3
Query: 102 CIQIINISIFHSMCYC*SLNMKIESKPLRYAHAEGHTD--VCYTEDGRNIITCGHDGDVR 275
C+Q++ +I S Y ++ + + + A EGH+ C D +I+ D +R
Sbjct: 278 CLQLVR-NILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLISGSMDKTIR 336
Query: 276 IWMDIEDDDPNS-HCVGESVLAVCYKDKRLYVATDNHLVQAYTFPDFDKDGIVTRFTAAV 452
IW + + H +SVL + + L + + V+ + F K + T V
Sbjct: 337 IWNYRTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSG-GKRITLRGHTGPV 395
Query: 453 TQIKSSCKIEALGCCSENMEAKICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGD 632
++ + S++ KI ++E + S H GPV SLA+ ++ + D
Sbjct: 396 NSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSCSL--D 453
Query: 633 GLMRIWDIDTXKVV 674
G ++ WDI+ K V
Sbjct: 454 GTIKQWDIEKKKCV 467
Score = 32.7 bits (71), Expect = 0.057
Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Frame = +3
Query: 204 GHTD-VCYTEDGRNIITCG-HDGDVRIWMDIEDDDPNSHCVGESVLAVC--YKDKRLYVA 371
GH+D V + RNI+ G +D +R+W ++ + G S C + +L
Sbjct: 271 GHSDGVMCLQLVRNILASGSYDATIRLW-NLATFQQVALLEGHSSGVTCLQFDQCKLISG 329
Query: 372 TDNHLVQAYTFPDFDKDGIVTRFTAAVTQIKSSCKIEALGCCSENMEAKICNVEGGAPIF 551
+ + ++ + + + I+ T +V + + G S + K+ + GG I
Sbjct: 330 SMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLLVSG--SADCTVKLWHFSGGKRI- 386
Query: 552 VMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDT 662
+ H GPV S+ I + D ++IW ++T
Sbjct: 387 TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLET 423
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 36.7 bits (81), Expect = 0.004
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 5/152 (3%)
Frame = +3
Query: 243 IITCGHDGDVRIWMDIEDDDPNSHCVGES-VLAVCYK-DKRLYVATDNHLVQAYTFPDFD 416
+++ G+D +R W + + +S V +C DK+ A N V+ Y
Sbjct: 13 LVSSGYDHTIRFWEALSGICSRTIQHADSQVNRLCISPDKKFLAAAGNPHVRLYDINTSS 72
Query: 417 KDGIVT--RFTAAVTQIKSSCKIEALGCCSENMEAKICNVEGGAPIFVMS-NHKGPVLSL 587
+ ++T T VT I C + L SE+ K+ ++ AP + +HK PV L
Sbjct: 73 QMPLMTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMR--APSVQRNYDHKSPVNDL 130
Query: 588 AICPHMKYASTACGDGLMRIWDIDTXKVVKEI 683
I P+ + G +R WD+ E+
Sbjct: 131 LIHPNQGELLSCDQSGRVRAWDLGENSCTHEL 162
Score = 32.3 bits (70), Expect = 0.076
Identities = 34/187 (18%), Positives = 72/187 (38%), Gaps = 13/187 (6%)
Frame = +3
Query: 159 NMKIESKPLRYAHAEGHTDVCYTEDGRNIITCGHDGDVRIWMDIEDDDPNSHCVGES--- 329
+M+ S Y H D+ + +++C G VR W D+ ++ + E
Sbjct: 111 DMRAPSVQRNYDHKSPVNDLLIHPNQGELLSCDQSGRVRAW-DLGENSCTHELIPEEDVP 169
Query: 330 VLAVCYKDKRLYVATDNHLVQAYTFPDFDKDGI-----VTRFTA---AVTQIKSSCKIEA 485
+ ++ + N+ Y + + G V +F A +T+ S ++
Sbjct: 170 MSSITVGSDGSMLIAGNNKGNCYVWRMLNHQGASLLQPVVKFQAHQRYITRCVLSPDVKH 229
Query: 486 LGCCSENMEAKICNVEGGAPIFV--MSNHKGPVLSLAICPHMKYASTACGDGLMRIWDID 659
L CS + I + E + + + H+ V A Y TA D + R+W++
Sbjct: 230 LATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDCAFSADSTYLVTASSDHVARLWELS 289
Query: 660 TXKVVKE 680
+ + +++
Sbjct: 290 SGETIRQ 296
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Frame = +3
Query: 201 EGHTD----VCYTEDGRNIITCGHDGDVRIW 281
EGHT+ + + DG+ + T DG V++W
Sbjct: 80 EGHTNNVTAIAFHCDGKWLATSSEDGTVKVW 110
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 36.3 bits (80), Expect = 0.005
Identities = 30/155 (19%), Positives = 62/155 (40%), Gaps = 3/155 (1%)
Frame = +3
Query: 219 CYTEDGRNIITCGHDGDVRIWMDIEDDDPNS-HCVGESVLAVCYKDKRLYVATDNHLVQA 395
C + DG+ I DG + +W + D + G+ L + Y ++ + + Q
Sbjct: 110 CISPDGQTIAFTSVDGRIAVWDNPSDCKISELDTKGKFGLCIDYSPNGRFIVSGHQTGQL 169
Query: 396 YTFPDFDKD--GIVTRFTAAVTQIKSSCKIEALGCCSENMEAKICNVEGGAPIFVMSNHK 569
+ +++ T+ V + S L ++ I +V G + + H
Sbjct: 170 FLISTETGRLFHVLSGHTSPVRSVAFSPGSTLLAAAGDSKMITIYDVLSGDQVGQLRGHA 229
Query: 570 GPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVV 674
+ ++A P +A +G ++IWDIDT + +
Sbjct: 230 AWIFAVAFNPVGDLLLSADVEGKIKIWDIDTMECI 264
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 35.9 bits (79), Expect = 0.006
Identities = 19/75 (25%), Positives = 37/75 (49%)
Frame = +3
Query: 516 KICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVKEINCVP 695
KI ++ G ++ H V LA+ P Y + D +++ WD++T KV++ +
Sbjct: 188 KIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYH--G 245
Query: 696 KINTFYAAKVLCXMD 740
++ YA K+ +D
Sbjct: 246 HLSGVYALKLHPTLD 260
Score = 34.3 bits (75), Expect = 0.019
Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Frame = +3
Query: 333 LAVCYKDKRLYVATDNHLVQAYTFPDFDKDGIVTRF---TAAVTQIKSSCKIEALGCCSE 503
LAV + L+ ++ +V+ + D + + ++ + + V +K ++ L
Sbjct: 211 LAVSPRHPYLFSCGEDKMVKCW---DLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGR 267
Query: 504 NMEAKICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVV 674
+ A++ ++ + V+S HK V SLA+ T D +R+WD+ K +
Sbjct: 268 DAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTL 324
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 552 VMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDI 656
V+S H G V + + P ++ T GD ++IWD+
Sbjct: 158 VISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDL 192
>SPCC16C4.08c |skb15||Shk1 kinase binding protein
15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 35.1 bits (77), Expect = 0.011
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 558 SNHKGPVLSLAICPHMKYASTACGDGLMRIWDI 656
S+HKG + +A+ P K A T GDG +R+WD+
Sbjct: 118 SSHKG-ITGIAVHPSEKLALTVGGDGKLRLWDL 149
Score = 30.7 bits (66), Expect = 0.23
Identities = 34/167 (20%), Positives = 71/167 (42%), Gaps = 2/167 (1%)
Frame = +3
Query: 183 LRYAHAEGHTDVCYTEDGRNIITCGHDGDVRIWMDIEDDDPNSHCVGESVLAVCYKDKRL 362
L+ + +G T + + +T G DG +R+W + G+ + + L
Sbjct: 115 LKSSSHKGITGIAVHPSEKLALTVGGDGKLRLWDLVRGKG------GKVLPLSTIPESIL 168
Query: 363 YVATDNHLVQAYTFPDFDKDGIVTRFT-AAVTQIKSSCKIEA-LGCCSENMEAKICNVEG 536
++ + ++ + D K + + F+ ++ +Q+ + C ++ L +N + +
Sbjct: 169 FLNESSFVIMSRRGIDAFKLDLTSLFSFSSKSQLNALCLYQSKLIVGRDNGTVLVLDTSD 228
Query: 537 GAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVK 677
G + + HK V S + P Y TA DG + IWD D V++
Sbjct: 229 GKILHEFTAHKKRVKS--VYPVDDYLITASSDGSVCIWDKDWNLVIE 273
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 33.9 bits (74), Expect = 0.025
Identities = 34/164 (20%), Positives = 68/164 (41%), Gaps = 7/164 (4%)
Frame = +3
Query: 210 TDVCYTEDGRNIITCGHDGDVRIWMDIEDDDPNS--HCVGES--VLAVCYKDKRLY---V 368
TD+ + D + II G +G R D NS G S V AV + R +
Sbjct: 106 TDLDWDGDSQRIIAVG-EGKERYGHAFTADSGNSVGEIFGHSSVVNAVSLRKSRPFRAAT 164
Query: 369 ATDNHLVQAYTFPDFDKDGIVTRFTAAVTQIKSSCKIEALGCCSENMEAKICNVEGGAPI 548
A+D++ + + + + + + V ++ S E + + + + + G +
Sbjct: 165 ASDDNSINFFHGTPYRFNRSLRVHSKFVYDVRYSPNDERFASAGADGKVYVFDGKTGDQV 224
Query: 549 FVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVKE 680
+ + HKG + S++ P T+ +IWD +T +++E
Sbjct: 225 YEIDAHKGSIFSISWSPDSSQFVTSSAGYSCKIWDANTGSLIRE 268
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 33.5 bits (73), Expect = 0.033
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 525 NVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDI 656
N+ G P+ ++ G + S+AIC K + C DG ++DI
Sbjct: 96 NLHTGKPLVNQDSNAGAIWSIAICDETKTLAVGCDDGSCVLFDI 139
Score = 25.4 bits (53), Expect = 8.7
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +3
Query: 474 KIEALGCCSENMEAKICNVEGGAPIF----VMSNHKGPVLSLAICPHMKYASTACGDGLM 641
K A+GC ++ + ++ GG + V+ +LSL + C DG++
Sbjct: 123 KTLAVGC--DDGSCVLFDISGGPGVIEFKRVLMRQTSRILSLDF-QTKDHLVGGCADGVI 179
Query: 642 RIWDIDT 662
++WD+ T
Sbjct: 180 KVWDLST 186
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 32.7 bits (71), Expect = 0.057
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 6/164 (3%)
Frame = +3
Query: 204 GHTDVCYTEDGRN--IITCGHDGDVRIWMDIEDDDPNSHCVGES--VLAVCYKDKRLYVA 371
GHTD T G +++ +D +RIW + + H G S + +V Y+ +R
Sbjct: 505 GHTDSVRTISGYGDILVSGSYDSSIRIWR-VSTGECLYHLRGHSLRIYSVLYEPERNICI 563
Query: 372 TDN--HLVQAYTFPDFDKDGIVTRFTAAVTQIKSSCKIEALGCCSENMEAKICNVEGGAP 545
+ + ++ + ++ A VT + G S + +I ++ G P
Sbjct: 564 SGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQNRLISG--SADSTIRIWDLNTGKP 621
Query: 546 IFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVK 677
+ V+ ++ G + S H + DG +++WD+ T K+++
Sbjct: 622 LMVLPSNSGYISSFVSDEHKIISGN---DGSVKLWDVRTGKLLR 662
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 32.7 bits (71), Expect = 0.057
Identities = 13/62 (20%), Positives = 33/62 (53%)
Frame = +3
Query: 498 SENMEAKICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVK 677
+E+ + K+ ++ +V S H+ + SL + ++ + GD R+WD++T + +
Sbjct: 379 TEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCIL 438
Query: 678 EI 683
++
Sbjct: 439 KL 440
Score = 31.1 bits (67), Expect = 0.17
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +3
Query: 498 SENMEAKICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDID 659
S++ + +++ G HK V+S+ P + ++ GD RIW ID
Sbjct: 557 SKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSID 610
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 558 SNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDT 662
+ H VLS+A+ P ++ + D M+ WD+ T
Sbjct: 535 TGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQT 569
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 32.7 bits (71), Expect = 0.057
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 537 GAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVKEINC 689
G P+ + H PV LA+ K + D ++ WD++T + NC
Sbjct: 222 GYPVTSLKKHTAPVSCLALHGSEKKVLSGSWDKMVYYWDLNTGDAISTYNC 272
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 31.9 bits (69), Expect = 0.100
Identities = 15/73 (20%), Positives = 37/73 (50%)
Frame = +3
Query: 468 SCKIEALGCCSENMEAKICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRI 647
+C + + S + ++ G + V+ H G V S+ I P + +A D +RI
Sbjct: 584 ACLGDLIVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRI 643
Query: 648 WDIDTXKVVKEIN 686
W++++ ++++ ++
Sbjct: 644 WNLESGELLQTLH 656
Score = 31.5 bits (68), Expect = 0.13
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 492 CCSENMEAKI--CNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTX 665
C S +AKI N+E G + + H V + ++ +++A D +R+WD++T
Sbjct: 632 CISAGTDAKIRIWNLESGELLQTLHGHSNLVSQVTFNQNILVSASAPPDTSLRVWDLNTG 691
Query: 666 KVVKEINC 689
+ C
Sbjct: 692 SCRDILKC 699
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 31.5 bits (68), Expect = 0.13
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 564 HKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVKE 680
H+ V+ P+ Y TAC D ++R WD+ + +++ E
Sbjct: 325 HEQAVIDCKFLPNTPYLLTACADCVIRKWDVRSGQLLGE 363
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 31.1 bits (67), Expect = 0.17
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +3
Query: 153 SLNMKIESKPLRYAHAEGHTD----VCYTEDGRNIITCGHDGDVRIWMDIEDDD 302
S+N KI+ A EGH + + ++ +G + TC D V IW EDD+
Sbjct: 359 SINEKIDDDWECTAALEGHENEVKCIAWSCNGNYLATCSRDKSVWIWEATEDDE 412
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 31.1 bits (67), Expect = 0.17
Identities = 17/73 (23%), Positives = 30/73 (41%)
Frame = +3
Query: 450 VTQIKSSCKIEALGCCSENMEAKICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACG 629
+TQIK + + L C+++ + G + H G + + I +
Sbjct: 13 LTQIKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINKSSTLMVSGAA 72
Query: 630 DGLMRIWDIDTXK 668
D MR+WD+ T K
Sbjct: 73 DNTMRLWDVKTGK 85
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +3
Query: 561 NHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVKEINCVPKINT 707
N + L P Y T+C D + D+D+ +V+K +NT
Sbjct: 189 NSGSTITDLQFYPDRTYFITSCKDTTAKAIDVDSFEVIKTYLTDTPLNT 237
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 31.1 bits (67), Expect = 0.17
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 174 SKPLR--YAHAEGHTDVCYTEDGRNIITCGHDGDVRIW 281
S+PL AH+ D+ T D +I+C D V++W
Sbjct: 69 SQPLAKIQAHSAWVNDIALTHDSEGVISCSSDSTVKLW 106
Score = 30.7 bits (66), Expect = 0.23
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +3
Query: 195 HAEGHTDVCYTEDGRNIITCGHDGDVRIW 281
H + D+ ++DGR I+T D +++W
Sbjct: 215 HTDNVRDILISDDGRTILTASSDATIKLW 243
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 30.7 bits (66), Expect = 0.23
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 195 HAEGHTDVCYTED--GRNIITCGHDGDVRIW 281
H E TD+ Y + NI+TC DG V IW
Sbjct: 290 HLEPVTDITYINNPPSNNIVTCSTDGLVHIW 320
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 30.7 bits (66), Expect = 0.23
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 573 PVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVKEINCVPKIN 704
PV L P + +TA GDG++ WDI K ++ +N KIN
Sbjct: 235 PVNDLKFHPIHQTLATAGGDGVVAFWDIQVRKRLRVLN-PSKIN 277
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 29.9 bits (64), Expect = 0.40
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 189 YAHAEGHTDVCYTEDGRNIITCGHDGDVRIW 281
+AH + +V + D N TC D +VR W
Sbjct: 615 FAHQDSIMEVTFQPDTYNFFTCSKDREVRYW 645
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 564 HKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVKEI 683
HK PVLS+ I K T D ++IW +D K I
Sbjct: 575 HKLPVLSMDISYDSKLLVTCSADKNVKIWGLDFGDCHKSI 614
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +3
Query: 216 VCYTEDGRNIITCGHDGDVRIWMDIEDDDPN 308
+C + D + +T G DV++W DD N
Sbjct: 221 MCVSPDAKRCLTAGTGSDVKVWEISFPDDNN 251
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 213 DVCYTEDGRNIITCGHDGDVRIW-MDIEDDDPNSHCVGESVLAVCYK 350
D+ Y D + ++TC D +V+IW +D D + +S++ V ++
Sbjct: 583 DISY--DSKLLVTCSADKNVKIWGLDFGDCHKSIFAHQDSIMEVTFQ 627
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = +3
Query: 510 EAKICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDI 656
E ++ ++ + I + H G + LA+ Y +TA D +++W +
Sbjct: 458 ELEVYDIASSSLIERIQAHDGAIWDLAVGHDGTYFATASADHTVKLWSL 506
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 29.9 bits (64), Expect = 0.40
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 14/167 (8%)
Frame = +3
Query: 201 EGHTDVCYTEDGRNIITCGHDGDVRIWMDIEDDDPNSHCVGESVLAVCYKDKRLYVAT-- 374
+G T V ++ DG+ I D +RIW H ESV +V + Y+ +
Sbjct: 418 DGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGS 477
Query: 375 -DNHL----VQAYT--FPDFDKDGIVTR--FTA---AVTQIKSSCKIEALGCCSENMEAK 518
DN + +Q + P K+G + + FT + + S + + S++ +
Sbjct: 478 LDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQ 537
Query: 519 ICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDID 659
+ + + H V+S+A+ P+ +T GD RIW +
Sbjct: 538 FWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSYE 584
Score = 29.1 bits (62), Expect = 0.70
Identities = 29/150 (19%), Positives = 60/150 (40%), Gaps = 3/150 (2%)
Frame = +3
Query: 216 VCYTEDGRNIITCGHDGDVRIWMDIEDDDPNSHCVG--ESVLAVCY-KDKRLYVATDNHL 386
V ++ DG+ + T D +RIW DI G + + ++ + KD + V+
Sbjct: 340 VAFSPDGKYLATGVEDQQIRIW-DIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDR 398
Query: 387 VQAYTFPDFDKDGIVTRFTAAVTQIKSSCKIEALGCCSENMEAKICNVEGGAPIFVMSNH 566
+ + ++ VT + S + + S + +I G + + H
Sbjct: 399 TVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIW-TSSGTLVEQLHGH 457
Query: 567 KGPVLSLAICPHMKYASTACGDGLMRIWDI 656
+ V S+A P KY + D +++W++
Sbjct: 458 EESVYSVAFSPDGKYLVSGSLDNTIKLWEL 487
Score = 26.6 bits (56), Expect = 3.8
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +3
Query: 459 IKSSCKIEALGCCSENMEAKICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGL 638
+ ++ K+ L C S N+ + EGG + HK +LS+ + P K+ + D
Sbjct: 478 LDNTIKLWELQCVS-NVAPSMYK-EGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRT 535
Query: 639 MRIWDIDT 662
++ W D+
Sbjct: 536 IQFWSPDS 543
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 29.9 bits (64), Expect = 0.40
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 192 AHAEGHTDVCYTEDGRN--IITCGHDGDVRIW 281
AH+ +DV Y E G N I T G+DG V++W
Sbjct: 389 AHSSLVSDVRYIESGVNRFIATSGYDGCVKLW 420
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 29.9 bits (64), Expect = 0.40
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Frame = +3
Query: 201 EGHTDVCYTE--DGRNIITCGHDGDVRIWMDIEDDDPNSHCV-----GESVLAVCYKDKR 359
+GH D+ T + I++ G+DG VRIW + HCV V + + +R
Sbjct: 426 QGHEDLIRTVRFNDEKIVSGGYDGTVRIW---NFNTGEQHCVLHNSRNSRVFGLQFDHRR 482
Query: 360 LYVATDNHLVQAYTFPD 410
+ T + + + F D
Sbjct: 483 IIACTHSSEILVWNFDD 499
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/60 (21%), Positives = 24/60 (40%)
Frame = +3
Query: 498 SENMEAKICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVK 677
S++ + +V ++ + H G VL L C + D + IWD + +K
Sbjct: 238 SKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLK 297
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 29.9 bits (64), Expect = 0.40
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 552 VMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVV 674
V HKG V L++ + ++ DG++RIW++ T + V
Sbjct: 374 VFIGHKGRVRCLSVHVSGNWLASGGDDGVLRIWEVMTGRCV 414
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 29.5 bits (63), Expect = 0.53
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 495 CSENMEAKICNVEGGAPIFVMSNHKGPVLSLAICP-HMKYASTACGDGLMRIWD 653
CS + +V A ++ + H V L I H Y TA DGL+++WD
Sbjct: 110 CSPLGNLNVWDVNLEALLYDFNEHSRAVHKLDISSFHPSYVLTASQDGLIKLWD 163
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 543 PIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXK 668
P ++ H G VL + P+ + ++ D +RIWD + K
Sbjct: 213 PFLKLAAHNGVVLCVNYSPNGVFLASCGRDKTIRIWDSTSNK 254
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 29.5 bits (63), Expect = 0.53
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 552 VMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVKEI 683
V H PV +L+ + +Y +T G + IW T K+ KE+
Sbjct: 470 VFMRHTAPVSALSFSHNGRYLATGDTSGGVCIWSCKTAKLFKEL 513
Score = 28.7 bits (61), Expect = 0.93
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 537 GAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWD 653
G+ I N+KGPVLSL Y + DG + ++D
Sbjct: 295 GSQILSFHNNKGPVLSLKWSGTDTYLAAGSADGTITLFD 333
>SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 360
Score = 29.1 bits (62), Expect = 0.70
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 591 ICPHMKYASTACGDGLMRIWDIDT 662
+CPHM++A+T DG +R + I T
Sbjct: 110 LCPHMEFAATPPYDGTLRTYYITT 133
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 29.1 bits (62), Expect = 0.70
Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 6/133 (4%)
Frame = +3
Query: 303 PNSHCVGES--VLAVCYKDKRLYVAT---DNHLVQAYTFPDFDKDGIVTRFTAAVTQIKS 467
PN G + VL + Y A+ D ++ F D G++ A+T ++
Sbjct: 42 PNLQMFGHTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVKNYGVLNGCKGAITDLQW 101
Query: 468 SCKIEALGCCSENMEAKICNVEGGAPIFVMSNHKGPVLSLAICP-HMKYASTACGDGLMR 644
S + C S + + G I H G V +L + + ++ D M+
Sbjct: 102 SRDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMK 161
Query: 645 IWDIDTXKVVKEI 683
+WD + +K I
Sbjct: 162 VWDSRSKDCIKTI 174
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 29.1 bits (62), Expect = 0.70
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 213 DVCYTEDGRNIITCGHDGDVRI 278
DVC++ DG ++ C +DG+V +
Sbjct: 327 DVCWSPDGLSLFLCSYDGNVLV 348
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 555 MSNHKGPVLSLAICPHMKYASTACGDGLMRIW 650
MS H G V S+ P+ +Y ++ D ++ IW
Sbjct: 70 MSTHTGTVTSVRFSPNGQYLASGSDDRVVIIW 101
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 29.1 bits (62), Expect = 0.70
Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 3/160 (1%)
Frame = +3
Query: 216 VCYTEDGRNIITCGHDGDVRIWMDIEDDDP---NSHCVGESVLAVCYKDKRLYVATDNHL 386
V +T DGR ++T G+ +W + + SH A D R ++ D
Sbjct: 87 VRWTPDGRRLLTGSSTGEFTLWNGLTFNFELINQSHDYAVR-CAEWSTDGRWLISGDGGG 145
Query: 387 VQAYTFPDFDKDGIVTRFTAAVTQIKSSCKIEALGCCSENMEAKICNVEGGAPIFVMSNH 566
+ Y P+ + IV V + S S++ K+ N ++ H
Sbjct: 146 MVKYFEPNLNNVKIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNFHMSTEELKLTGH 205
Query: 567 KGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVKEIN 686
V ++ P ++ D L++ WD T + ++
Sbjct: 206 GWDVKTVDWHPSKGLLASGSKDNLVKFWDPRTGTCIATLH 245
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 28.7 bits (61), Expect = 0.93
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 516 KICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVKEINCVP 695
+I ++ G P+ H P+ SL + Y+ + D +RIWD+ + + I
Sbjct: 519 RIWDLRIGLPVRSFIGHTAPISSLQFDSNHLYSGSY--DNSVRIWDLRSGSPINIIPMEK 576
Query: 696 KINT 707
K+N+
Sbjct: 577 KVNS 580
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 28.7 bits (61), Expect = 0.93
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 564 HKGPVLSLAICPHMKYASTACG-DGLMRIWDI 656
H GP+ S+A PH + C D + +WD+
Sbjct: 280 HSGPIHSVAFNPHNDFILATCSTDKTIALWDL 311
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 192 AHAEGHTDVCYTEDGRNIITCGHDGDVRIWMDIEDDDPNS 311
AH + T + ++ DG + T +DGDV W+ D NS
Sbjct: 116 AHYQPLTILKFSNDGMVLFTASNDGDVFAWLISTLVDQNS 155
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 537 GAPIFVMSNHKGPVLSLAICPHMKYASTACGDG-LMRIWDID 659
G + HKG V ++ P K CGD ++ +WD+D
Sbjct: 305 GTAYATLRGHKGDVNAVKWMPGSKSKLATCGDDCVVSLWDLD 346
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 27.5 bits (58), Expect = 2.1
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +3
Query: 195 HAEGHTDVCYTEDGRNIITCGHDGDVRIW 281
HA D+ +++DGR+ ++ D +++W
Sbjct: 309 HARPIRDLSFSQDGRSFLSTSFDKTIKLW 337
Score = 26.2 bits (55), Expect = 5.0
Identities = 8/29 (27%), Positives = 14/29 (48%)
Frame = +3
Query: 195 HAEGHTDVCYTEDGRNIITCGHDGDVRIW 281
H G + + E+G+ +T D +R W
Sbjct: 395 HLGGINSITFLENGKRFVTTSDDSSMRFW 423
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 189 YAHAEGHTDVCYTEDGRNIITCGHDGDVRIW 281
Y H VC + +I + GHDG +R W
Sbjct: 336 YGHEGPVLCVCVPKATHHIFSGGHDGTIRCW 366
Score = 25.8 bits (54), Expect = 6.6
Identities = 13/63 (20%), Positives = 25/63 (39%)
Frame = +3
Query: 543 PIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVVKEINCVPKINTFYAAK 722
P H+GPVL + + + + DG +R W + + I+ + +T +
Sbjct: 331 PHLTFYGHEGPVLCVCVPKATHHIFSGGHDGTIRCWSLPANQTSDSISKILTGSTIFQGH 390
Query: 723 VLC 731
C
Sbjct: 391 EDC 393
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 27.1 bits (57), Expect = 2.8
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 528 VEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDI 656
VEG + N GPV SLA+ + K+ A G +RI+D+
Sbjct: 3 VEGDKGVLEPVNFVGPVTSLALIHNDKFLCCAQGP-CLRIYDV 44
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +3
Query: 540 APIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDIDTXKVV 674
+P+ + H GPV+ + A + D ++ WD+ T + V
Sbjct: 260 SPLILCEGHTGPVMDIVFSDDPSVAYSVGQDHTIKTWDLITGQNV 304
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +3
Query: 174 SKPLRYAHAEGHTDVC----YTEDGRNIITCGHDGDVRIW 281
+KP+ H GH V ++ DGR I T D VR+W
Sbjct: 379 TKPITKMH--GHQKVVNHASFSPDGRCIATASFDSSVRLW 416
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 570 GPVLSLAICPHMK-YASTACGDGLMRIWDIDTXKVVKEI 683
G ++ AI H + AC D +RI D+ T K+V+E+
Sbjct: 530 GSSITHAIYQHSSDLVAVACDDFGIRIVDVQTRKIVREL 568
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/44 (25%), Positives = 27/44 (61%)
Frame = +3
Query: 201 EGHTDVCYTEDGRNIITCGHDGDVRIWMDIEDDDPNSHCVGESV 332
+G + + +++DG +++ G D +R+W D+ + ++ CV E +
Sbjct: 299 QGISCLSFSQDGNYLLSRGEDNALRVW-DLRN---SNKCVNERI 338
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 25.4 bits (53), Expect = 8.7
Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 12/144 (8%)
Frame = +3
Query: 204 GHTDVCYTED---GRNIITCGHDGDVRIW-MDIEDDDPNSHCVGESVLAVCYKDKRLYVA 371
GH D T +++ G+DG +R+W I D + S GE++ D L +
Sbjct: 164 GHEDYVRTASWMSATRLVSGGYDGTIRLWDTRIADPEVMSFSHGEAI------DVVLPMQ 217
Query: 372 TDNHLVQAYTFPDFDKDGIVTRFTAAVTQIKSSCKIEALGCCSENMEAKICNVEGGAPIF 551
+ + ++ A D + R T I L SEN ++G I+
Sbjct: 218 SGSTVISAGGPSIKVWDLVAGRQTPTKKLSNHQKSITCLAMNSENTRLLSGGLDGHVKIY 277
Query: 552 VMSNHK--------GPVLSLAICP 599
+S+ K GP+LS+ + P
Sbjct: 278 NISDWKVVHGMKYSGPILSMGLSP 301
>SPCC63.06 |||human WDR89 family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 331
Score = 25.4 bits (53), Expect = 8.7
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +3
Query: 210 TDVCYTEDGRNIITCGHDGDVRIW 281
T + + +ITCG +G++ +W
Sbjct: 59 TGIISCDQLNGVITCGSEGEIHLW 82
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 516 KICNVEGGAPIFVMSNHKGPVLSLAICPHMKYASTACGDGLMRIWDI 656
++ ++E G H VLS++I P + + D ++IW+I
Sbjct: 88 RLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNI 134
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,180,070
Number of Sequences: 5004
Number of extensions: 68809
Number of successful extensions: 323
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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