Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_E01
         (748 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   3.0  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   3.0  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   4.0  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   7.0  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   9.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.3  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 642 RIWDIDTXKVVKEINCVPKINTF 710
           R+W +DT  + ++  C PKI+ F
Sbjct: 133 RLWILDTGILGEKQICRPKIHVF 155


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 291 EDDDPNSHCVGESVLAVCYKDKRLYVATDNHLVQAYTFPDFDKDGIV 431
           ED +  S+ +   V A C  D+ L   TD  LVQ  + PD  + GI+
Sbjct: 324 EDINEGSNYMQTRVPAWC--DRVLLNPTDKMLVQDISSPDAVEYGII 368


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 399 YRLVQDDYQWLHTVSYLCSTLPKHF 325
           Y L Q+D  W+ T S++  T+   F
Sbjct: 24  YNLNQEDSNWIITNSFIIFTMQTGF 48


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 384 DDYQWLHTVS 355
           D YQW HTVS
Sbjct: 11  DVYQWNHTVS 20


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 483 ALGCCSENMEAKICNVE 533
           ALGC +EN   K  N+E
Sbjct: 323 ALGCWNENRPLKRRNIE 339


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 663  EYQYPIFSLNHRHRPYLHTS 604
            E  YP   L+   RPYL T+
Sbjct: 1166 ENAYPEVELDRELRPYLRTA 1185


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,848
Number of Sequences: 438
Number of extensions: 4812
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)