Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_D19
         (894 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   3.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   3.2  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   9.9  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +2

Query: 380 VLVTGLFMLENMTKPLL-YTMKQLKHAPQTVLSILLHFTKTALLVMKNEKCGNKLKKIAL 556
           +L   LF+L+N+ KP++ +  K +K    T+    + F +    +    K  +KLKK+  
Sbjct: 115 LLKHNLFLLDNIVKPIIAFYYKPIK----TLNGHEIKFIRKEEYISFESKVFHKLKKMKY 170

Query: 557 L 559
           L
Sbjct: 171 L 171


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 54  VAKFFKTIKQY*LSYLRTNVRFNVCL 131
           V  FFK    Y  +Y+  N+ F +CL
Sbjct: 179 VEHFFKKQFHYIFTYMPYNIVFGLCL 204


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 472 VDLATFYQNRSACYEKREMWEQVKEDCT 555
           VDL T + + S    K+  W QV ++ T
Sbjct: 473 VDLLTSFSDSSIPKVKKMEWPQVPKNAT 500


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,779
Number of Sequences: 336
Number of extensions: 4580
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)