Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_D13
         (922 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.4  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
 Frame = -1

Query: 145 LLTVIFMLHNSPTLA-----SA*TDLYLNGWTKYTFPLEKKYSDT 26
           L+T +F  H+  T       ++   L+LN WTK    L K Y  T
Sbjct: 93  LITPLFFFHSFMTSVLFSQVASRWPLFLNEWTKIEINLLKHYQST 137


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 14/60 (23%), Positives = 28/60 (46%)
 Frame = +3

Query: 672  NDDIGNYFSTLSVGSLFICTFKSQNNLPLDRPRSPRLCPDIAGEIDRALXRLIKFRHPNI 851
            +D+ G  FS   +    ICT+K+ N          R   +   +++R +  L K ++P++
Sbjct: 1072 DDEGGLEFSVNKLFKCMICTYKADNK----ENEQLRKIQESLRDLNRKIESLEKMQYPDL 1127


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 14/60 (23%), Positives = 28/60 (46%)
 Frame = +3

Query: 672  NDDIGNYFSTLSVGSLFICTFKSQNNLPLDRPRSPRLCPDIAGEIDRALXRLIKFRHPNI 851
            +D+ G  FS   +    ICT+K+ N          R   +   +++R +  L K ++P++
Sbjct: 1072 DDEGGLEFSVNKLFKCMICTYKADNK----ENEQLRKIQESLRDLNRKIESLEKMQYPDL 1127


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +3

Query: 618  TCKVTSYMTLAIVEIIIMNDDIGNYFSTLSVGSLFIC 728
            T   T+  T  + ++I    D G Y+   S  S ++C
Sbjct: 1188 TTSTTTRPTTTVSQLIDDKCDSGQYYPHESCSSFYVC 1224


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,626
Number of Sequences: 336
Number of extensions: 4712
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25754817
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)