Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_D13
         (922 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81587-12|CAN99727.1|  220|Caenorhabditis elegans Hypothetical p...    29   4.7  
Z81587-11|CAB04705.2|  247|Caenorhabditis elegans Hypothetical p...    29   4.7  
AL032627-16|CAD56606.1|  301|Caenorhabditis elegans Hypothetical...    29   4.7  
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr...    28   8.2  
AF016665-6|AAL02468.1|  655|Caenorhabditis elegans Hypothetical ...    28   8.2  

>Z81587-12|CAN99727.1|  220|Caenorhabditis elegans Hypothetical
           protein T06G6.6b protein.
          Length = 220

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = -3

Query: 308 MLCFNDITCCFNHNKIFQITQKGSIEEFEEL-LSAGKFSEHIVINLSDSQLIIPG 147
           ML F +++   N N  F       +E  E   L   +F+E  ++  SDS +  PG
Sbjct: 40  MLRFGEVSATINDNGCFMHFDSKKLESIELCPLQCQRFNEATILQTSDSLICSPG 94


>Z81587-11|CAB04705.2|  247|Caenorhabditis elegans Hypothetical
           protein T06G6.6a protein.
          Length = 247

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = -3

Query: 308 MLCFNDITCCFNHNKIFQITQKGSIEEFEEL-LSAGKFSEHIVINLSDSQLIIPG 147
           ML F +++   N N  F       +E  E   L   +F+E  ++  SDS +  PG
Sbjct: 67  MLRFGEVSATINDNGCFMHFDSKKLESIELCPLQCQRFNEATILQTSDSLICSPG 121


>AL032627-16|CAD56606.1|  301|Caenorhabditis elegans Hypothetical
           protein Y41C4A.12b protein.
          Length = 301

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +3

Query: 459 HKMFSCNCFLIFTFPFSIVKNPKHTESCLLFS 554
           H M  C+  L   F F IVKN +++ SC  FS
Sbjct: 256 HNMKICDELLNQIFEFDIVKNDENSNSCRQFS 287


>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -1

Query: 853  NIFGCRNLIKRYSALSISPAISGQRRGERGLSSGKLF*LLNVHMNKLPTDKVEK*LPM 680
            N FG R L K Y    I   +  +   +  +    +F  LNV MN+   + +EK L +
Sbjct: 1307 NYFGSRGLWKNYLEAMICRILENENAEQELVIENSIFKHLNVSMNRKNKNLLEKLLQL 1364


>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -1

Query: 853  NIFGCRNLIKRYSALSISPAISGQRRGERGLSSGKLF*LLNVHMNKLPTDKVEK*LPM 680
            N FG R L K Y    I   +  +   +  +    +F  LNV MN+   + +EK L +
Sbjct: 1307 NYFGSRGLWKNYLEAMICRILENENAEQELVIENSIFKHLNVSMNRKNKNLLEKLLQL 1364


>AF016665-6|AAL02468.1|  655|Caenorhabditis elegans Hypothetical
           protein C49D10.10 protein.
          Length = 655

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 851 YIRMPKFNQTXQCPINFPSNIRAK 780
           Y  MP+F +T  CP+  P N + K
Sbjct: 628 YANMPQFAETFNCPLGSPMNPKKK 651


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,264,881
Number of Sequences: 27780
Number of extensions: 421509
Number of successful extensions: 872
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)