Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_D11
(807 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 34 0.69
AK127398-1|BAC86959.1| 719|Homo sapiens protein ( Homo sapiens ... 31 4.9
BC045743-1|AAH45743.1| 400|Homo sapiens ring finger protein 149... 30 8.6
BC032328-1|AAH32328.2| 400|Homo sapiens ring finger protein 149... 30 8.6
BC019355-1|AAH19355.2| 400|Homo sapiens ring finger protein 149... 30 8.6
AY450390-1|AAR21083.1| 400|Homo sapiens DNA polymerase-transact... 30 8.6
AK075141-1|BAC11430.1| 400|Homo sapiens protein ( Homo sapiens ... 30 8.6
AK074985-1|BAC11334.1| 400|Homo sapiens protein ( Homo sapiens ... 30 8.6
AC013722-2|AAY15089.1| 163|Homo sapiens unknown protein. 30 8.6
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 33.9 bits (74), Expect = 0.69
Identities = 43/148 (29%), Positives = 56/148 (37%), Gaps = 1/148 (0%)
Frame = +3
Query: 285 SLPSMTSCAPKQPRLSKMRPVEFAPTLRL*STGLALWCRAXXXXXXXXXXXXXXXANRSR 464
S PS TS + APT R S A A +
Sbjct: 1093 STPSTTSAPTTSTTSAPTTSTTSAPTHRTTSGPTTSTTLAPTTSTTSAPTTSTNSAPTTS 1152
Query: 465 TVSAMTLTLLSFWCPYAASRIASTIFPSITSQPRSS-LDAATSRACTTPVRRPSPTVGHF 641
T+SA T + +S P S I+S S TS P++S AATS + PSP
Sbjct: 1153 TISASTTSTIS--AP-TTSTISSPT-SSTTSTPQTSKTSAATSSTTSGSGTTPSPV--PT 1206
Query: 642 TRSSASGMT*TCSRFTRRTGSRPPVWPS 725
T ++++ T T S T T S P PS
Sbjct: 1207 TSTTSASTTSTTSAPTTSTTSGPGTTPS 1234
>AK127398-1|BAC86959.1| 719|Homo sapiens protein ( Homo sapiens
cDNA FLJ45489 fis, clone BRTHA2005448, highly similar
to Mus musculus calpain 12 (Capn12). ).
Length = 719
Score = 31.1 bits (67), Expect = 4.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 225 HPWSSVSWTESLTDAAQHWPSLPSMTSCAPKQPRLSKMRPVEFAPTLR 368
+PW V WT + +D+ W +LP T C + L K EF LR
Sbjct: 283 NPWGCVEWTGAWSDSCPRWDTLP--TEC--RDALLVKKEDGEFWMELR 326
>BC045743-1|AAH45743.1| 400|Homo sapiens ring finger protein 149
protein.
Length = 400
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 395 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 276
P + P S+PQC F G + LL + RS R P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399
>BC032328-1|AAH32328.2| 400|Homo sapiens ring finger protein 149
protein.
Length = 400
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 395 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 276
P + P S+PQC F G + LL + RS R P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399
>BC019355-1|AAH19355.2| 400|Homo sapiens ring finger protein 149
protein.
Length = 400
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 395 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 276
P + P S+PQC F G + LL + RS R P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399
>AY450390-1|AAR21083.1| 400|Homo sapiens DNA
polymerase-transactivated protein 2 protein.
Length = 400
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 395 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 276
P + P S+PQC F G + LL + RS R P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399
>AK075141-1|BAC11430.1| 400|Homo sapiens protein ( Homo sapiens
cDNA FLJ90660 fis, clone PLACE1004887, weakly similar to
GOLIATH PROTEIN. ).
Length = 400
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 395 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 276
P + P S+PQC F G + LL + RS R P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399
>AK074985-1|BAC11334.1| 400|Homo sapiens protein ( Homo sapiens
cDNA FLJ90504 fis, clone NT2RP3004090, weakly similar to
GOLIATH PROTEIN. ).
Length = 400
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 395 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 276
P + P S+PQC F G + LL + RS R P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399
>AC013722-2|AAY15089.1| 163|Homo sapiens unknown protein.
Length = 163
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 395 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 276
P + P S+PQC F G + LL + RS R P+
Sbjct: 123 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 162
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,939,493
Number of Sequences: 237096
Number of extensions: 2668311
Number of successful extensions: 7800
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7799
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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