Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_D08
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   4.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   4.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.0  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +1

Query: 661 KVRCAICRTIRKETSNAC 714
           K+  A+C++ RK+ S++C
Sbjct: 30  KLLDALCQSFRKQNSSSC 47


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +1

Query: 616 NIVLSRLTHVNYGSYKVRCAICRTIRKETSNACY 717
           N+ L   T V+     V C  C    K+T + CY
Sbjct: 280 NLCLVIYTLVSVSLVMVTCDACTIASKQTISWCY 313


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +1

Query: 616 NIVLSRLTHVNYGSYKVRCAICRTIRKETSNACY 717
           N+ L   T V+     V C  C    K+T + CY
Sbjct: 280 NLCLVIYTLVSVSLVMVTCDACTIASKQTISWCY 313


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 323 SQCYQRILS*SSPQCLFRSKLRTRRR 246
           SQ   R+L  S P C +  + ++RR+
Sbjct: 394 SQEESRVLDLSKPGCSYTGEQKSRRK 419


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,620
Number of Sequences: 336
Number of extensions: 2979
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)