Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_D02
(789 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPa... 354 1e-96
UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologu... 262 9e-69
UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n... 248 1e-64
UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPa... 244 3e-63
UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, wh... 161 2e-38
UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lambl... 130 5e-29
UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n... 105 2e-21
UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n... 95 2e-18
UniRef50_A2FTG5 Cluster: ATPase, AAA family protein; n=1; Tricho... 85 3e-15
UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPa... 74 4e-12
UniRef50_A2FWK7 Cluster: ATPase, AAA family protein; n=1; Tricho... 70 8e-11
UniRef50_A3CXI0 Cluster: AAA family ATPase, CDC48 subfamily; n=3... 59 1e-07
UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putativ... 54 3e-06
UniRef50_A7AVE1 Cluster: Cell division cycle protein ATPase, put... 54 3e-06
UniRef50_Q8THE2 Cluster: Cell division control protein 48; n=7; ... 54 5e-06
UniRef50_A3H629 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 54 5e-06
UniRef50_Q0W6B6 Cluster: Putative cell division cycle protein 48... 52 2e-05
UniRef50_Q4UBT9 Cluster: Cell divison cycle CDC48 homologue, put... 51 3e-05
UniRef50_A0RUY9 Cluster: AAA ATPase; n=2; Thermoprotei|Rep: AAA ... 49 1e-04
UniRef50_Q2RI39 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 48 3e-04
UniRef50_Q74M89 Cluster: NEQ475; n=1; Nanoarchaeum equitans|Rep:... 48 3e-04
UniRef50_Q58556 Cluster: Cell division cycle protein 48 homolog ... 48 3e-04
UniRef50_Q9HPU1 Cluster: Cell division cycle protein; n=5; Eurya... 48 4e-04
UniRef50_Q5CJ12 Cluster: Putative uncharacterized protein; n=2; ... 47 5e-04
UniRef50_Q2FMV5 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 46 8e-04
UniRef50_Q9UYZ7 Cluster: ATPase of the AAA+ family; n=12; Euryar... 45 0.002
UniRef50_A2SR43 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 45 0.002
UniRef50_A1HPK1 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 44 0.006
UniRef50_Q1GSQ3 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 43 0.010
UniRef50_Q8PZP5 Cluster: Cell division control protein; n=4; Eur... 42 0.023
UniRef50_A4YMQ0 Cluster: Putative Vesicle-fusing ATPase; n=1; Br... 40 0.094
UniRef50_Q8TY20 Cluster: ATPase of the AAA+ class; n=1; Methanop... 39 0.12
UniRef50_A2QZY1 Cluster: Remark: Cdc48p of S. cerevisiae is more... 38 0.22
UniRef50_Q653E3 Cluster: Putative 26S protease regulatory subuni... 38 0.29
UniRef50_Q6N2G6 Cluster: AAA ATPase; n=2; Rhodopseudomonas palus... 38 0.38
UniRef50_UPI0001555990 Cluster: PREDICTED: similar to spermatoge... 37 0.50
UniRef50_A5K794 Cluster: Putative uncharacterized protein; n=1; ... 37 0.66
UniRef50_Q9HPG1 Cluster: Cell division cycle protein; n=1; Halob... 36 1.2
UniRef50_A4YDZ5 Cluster: Vesicle-fusing ATPase; n=2; Sulfolobace... 36 1.5
UniRef50_P35998 Cluster: 26S protease regulatory subunit 7; n=13... 36 1.5
UniRef50_Q9AW43 Cluster: 26S proteasome AAA-ATPase subunit; n=1;... 35 2.0
UniRef50_Q7QYT8 Cluster: GLP_70_13103_11571; n=1; Giardia lambli... 35 2.0
UniRef50_Q8TDL7 Cluster: Spermatogenesis associated factor; n=35... 35 2.0
UniRef50_Q8TX03 Cluster: Proteasome-activating nucleotidase; n=2... 35 2.0
UniRef50_Q7R4L3 Cluster: GLP_49_27747_26542; n=1; Giardia lambli... 35 2.7
UniRef50_Q4UAE5 Cluster: 26S proteasome ATPase subunit, putative... 35 2.7
UniRef50_Q5V0R7 Cluster: Cell division cycle protein 48; n=1; Ha... 35 2.7
UniRef50_A7BC87 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_Q7RTI8 Cluster: Putative uncharacterized protein PY0000... 34 3.5
UniRef50_UPI00005A005D Cluster: PREDICTED: similar to ankyrin re... 34 4.7
UniRef50_Q7R1G9 Cluster: GLP_38_50730_51935; n=1; Giardia lambli... 34 4.7
UniRef50_Q7QTA1 Cluster: GLP_15_26945_31573; n=3; root|Rep: GLP_... 33 6.2
UniRef50_P62191 Cluster: 26S protease regulatory subunit 4; n=11... 33 6.2
UniRef50_UPI0000E45FEB Cluster: PREDICTED: similar to calcium-ac... 33 8.2
UniRef50_UPI00015A3E7F Cluster: spermatogenesis associated facto... 33 8.2
UniRef50_P62333 Cluster: 26S protease regulatory subunit S10B; n... 33 8.2
>UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit); n=169;
Eukaryota|Rep: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit) - Homo
sapiens (Human)
Length = 806
Score = 354 bits (871), Expect = 1e-96
Identities = 161/207 (77%), Positives = 183/207 (88%)
Frame = +3
Query: 168 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 347
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 348 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 527
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 528 FXEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 707
F EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 708 NAVGYDDIGGCRKQLAQIKEMVELPLR 788
N VGYDDIGGCRKQLAQIKEMVELPLR
Sbjct: 199 NEVGYDDIGGCRKQLAQIKEMVELPLR 225
>UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologue,
putative; n=4; Plasmodium|Rep: Cell division cycle
protein 48 homologue, putative - Plasmodium chabaudi
Length = 250
Score = 262 bits (641), Expect = 9e-69
Identities = 116/202 (57%), Positives = 157/202 (77%), Gaps = 1/202 (0%)
Frame = +3
Query: 186 RLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRM 365
RLIVEEA +DDNSVVAL+ +ME+L FRGDT+L+KGK+R T+CI+L+D++ + KIR+
Sbjct: 26 RLIVEEATNDDNSVVALNTKRMEELNFFRGDTILIKGKKRHSTICIILNDNDLDEGKIRI 85
Query: 366 XXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLT-GNLFEVYLKPYFXEAY 542
D+V + CP + YGK++ +LPIDD++EGL LFE++LKPYF E+Y
Sbjct: 86 NKVARKNLRVCLGDIVYVKACPEIPYGKKIQVLPIDDTIEGLAKDTLFEIFLKPYFNESY 145
Query: 543 RPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGY 722
RP+ + D F+VRGG +VEFKVVE DP FCIV+PDTVI+ +G+PIKR++EE+ L+ +GY
Sbjct: 146 RPVKKGDLFLVRGGFMSVEFKVVEVDPDDFCIVSPDTVIYYEGDPIKRDDEEK-LDEIGY 204
Query: 723 DDIGGCRKQLAQIKEMVELPLR 788
DDIGGC+KQLAQI+EM+ELPLR
Sbjct: 205 DDIGGCKKQLAQIREMIELPLR 226
>UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
valosin - Strongylocentrotus purpuratus
Length = 596
Score = 248 bits (607), Expect = 1e-64
Identities = 127/206 (61%), Positives = 153/206 (74%)
Frame = +3
Query: 171 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 350
K +PNRL+VEEA++DDNSVV+LSQAKM++LQLFRGDTV+LKGK+R++TVCIVLSDD D
Sbjct: 17 KAKPNRLVVEEAINDDNSVVSLSQAKMDELQLFRGDTVMLKGKKRRDTVCIVLSDDTVTD 76
Query: 351 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 530
+KIR+ V+ RV + D V L F+VYL+PYF
Sbjct: 77 DKIRVNRV--------------------VRSNLRVR---LGDIVRNL----FDVYLRPYF 109
Query: 531 XEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALN 710
EAYRP+ + D F +RGGMRAVEFKVVETDP P+CIV+PDTVIH +G+ IKRE+EEE LN
Sbjct: 110 QEAYRPVRKGDIFQIRGGMRAVEFKVVETDPGPYCIVSPDTVIHFEGDAIKREDEEENLN 169
Query: 711 AVGYDDIGGCRKQLAQIKEMVELPLR 788
+GYDDIGGCRKQLA IKEMVELPLR
Sbjct: 170 EIGYDDIGGCRKQLASIKEMVELPLR 195
>UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPase,
putative; n=2; Leishmania|Rep: Transitional endoplasmic
reticulum ATPase, putative - Leishmania infantum
Length = 690
Score = 244 bits (596), Expect = 3e-63
Identities = 109/191 (57%), Positives = 143/191 (74%)
Frame = +3
Query: 159 SSDRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDD 338
+++ K + N+LIVEE +DDNSVV+L+ +ME+L +FRGDTVL+KGK+ + TVCI + DD
Sbjct: 7 NTNSKVKLNKLIVEEPYNDDNSVVSLNPKRMEELNIFRGDTVLVKGKKHRSTVCIAMEDD 66
Query: 339 NCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYL 518
CP EKI+M D + I PC V YG RVH+LPIDD+VE LTG+LFE +L
Sbjct: 67 ECPPEKIKMNKVARRNIRIHLGDTIRIVPCKDVPYGNRVHLLPIDDTVENLTGDLFENFL 126
Query: 519 KPYFXEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEE 698
KPYF E+YRP+ + D+F+ RG MR+VEFKVVE DP +CIV+PDT+IH +G+PI R E+E
Sbjct: 127 KPYFLESYRPVKKGDSFVCRGAMRSVEFKVVEVDPGDYCIVSPDTIIHSEGDPIHR-EDE 185
Query: 699 EALNAVGYDDI 731
EAL+ VGYDDI
Sbjct: 186 EALDGVGYDDI 196
>UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_91,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 772
Score = 161 bits (391), Expect = 2e-38
Identities = 89/221 (40%), Positives = 131/221 (59%), Gaps = 3/221 (1%)
Frame = +3
Query: 135 VLMIYRPRSSDRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKET 314
+L+ + P++ NRL+V E+ +DDNSVV L Q K+ +L+LF+GD VLL+GK K+T
Sbjct: 1 MLLRHPPKNKIPAKMNNRLMVCESTADDNSVVQLCQDKLNELKLFKGDMVLLEGKNNKKT 60
Query: 315 VCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLT 494
V I +S+ E + M D ++I P S+ +VHILP DS+ G
Sbjct: 61 VAIAISNRQ-DKESVHMNSVIRKNLGIQIGDFITIQPTASLPQLTKVHILPFQDSISGTN 119
Query: 495 -GNLFEVYLKPYFXEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDG 671
NL + YL PYF +AYRP+ + D F+V+ + +EFK++ T+P +V P T+++ +G
Sbjct: 120 EKNLTQNYLIPYFLDAYRPVSKGDCFVVKMA-KEIEFKIIATEPEDMGVVGPITILYTEG 178
Query: 672 EPIKREEE--EEALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
+KRE E E+ N GY +IGG KQL IK +VEL LR
Sbjct: 179 GTVKREIENKEQFDNQNGYANIGGMNKQLTIIKTIVELQLR 219
>UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_762_31096_33708 - Giardia lamblia
ATCC 50803
Length = 870
Score = 130 bits (313), Expect = 5e-29
Identities = 81/229 (35%), Positives = 114/229 (49%), Gaps = 27/229 (11%)
Frame = +3
Query: 183 NRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIR 362
NR IV + D+S + LS K+ L LF+GD V LKG+ K T +V S ++ +
Sbjct: 12 NRFIVNDNPGGDDSQIILSSEKVNVLDLFQGDYVRLKGRFGKTTHAMVQSREDVDKIVVL 71
Query: 363 MXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGL----------------- 491
M D+V + P ++ Y KR+ ++P + +EGL
Sbjct: 72 MNKTMRANLGVNLGDIVILYPAQNLPYHKRIKVIPFEQDLEGLNIAGYTVKQGEDGKPAP 131
Query: 492 ------TGNLFEVYLKPYFXEAYRPIHRDDTFMVRGGM----RAVEFKVVETDPSPFCIV 641
T +LF++ + PYF + RP+ +TF V R +EFKVV TDPSP CIV
Sbjct: 132 APFPGPTYDLFDICIAPYFKDKCRPVTEGNTFKVMTTSLPVNREIEFKVVLTDPSPACIV 191
Query: 642 APDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
I +GEPI R+E E VGY D+GG K+L I+E +ELPLR
Sbjct: 192 MDGGEIFYEGEPIDRDEHERENTKVGYSDLGGLGKELGMIREQIELPLR 240
>UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n=3;
Plasmodium (Vinckeia)|Rep: Cell division cycle ATPase,
putative - Plasmodium berghei
Length = 932
Score = 105 bits (251), Expect = 2e-21
Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 7/210 (3%)
Frame = +3
Query: 180 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEK 356
PN +VE + DN + +S+ KM++L + G TVLLKGK++KE V IV D+
Sbjct: 101 PNYCLVENIDENADNFDIYMSKEKMKELNINDGFTVLLKGKKKKEMVAIVREDNRLNKYS 160
Query: 357 IRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFE-VYLKPYFX 533
+ + +D++ I P ++K K V + P +D+V +T E L Y
Sbjct: 161 VSISFSIKRNLRLMHNDIIKIYPLSNIKNIKNVILSPFNDTVNNITKQEIEKEILNTYLK 220
Query: 534 EAYRPIHRDDTFMVRGGMRAVEFKVVE--TD---PSPFCIVAPDTVIHCDGEPIKREEEE 698
+Y+P+ D+T + + +E KV++ TD + + I+ + RE+ E
Sbjct: 221 NSYKPLSVDNTIYINYKNKRIELKVLKLITDDGQSEQHGCLTNTSHINLSETFLNREDYE 280
Query: 699 EALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
E + + Y+D+GG +KQL +I+E++ELPL+
Sbjct: 281 ENTDDINYEDLGGMKKQLNKIRELIELPLK 310
>UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n=1;
Plasmodium vivax|Rep: Cell division cycle ATPase,
putative - Plasmodium vivax
Length = 1089
Score = 94.7 bits (225), Expect = 2e-18
Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 25/228 (10%)
Frame = +3
Query: 180 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEK 356
P+ +VE DN + LS+AKME+L L G TVLLKGK++KE + I D
Sbjct: 270 PSYCLVENVDEQIDNCEIYLSKAKMEELNLSEGFTVLLKGKKKKEMLAIAKLDRRLQKHF 329
Query: 357 IRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLT-GNLFEVYLKPYFX 533
+ + +D++ I P V + V + P D+V GL+ L + L+PY
Sbjct: 330 VVISFAMKKNLRLMHNDIIKIFPLMKVHPLRTVVLSPFSDTVGGLSKAELEQEVLRPYLK 389
Query: 534 EAYRPIHRDDTFMVRGGMRAVEFKVV------------ETDP-----------SPFCIVA 644
++P+ + R VEF+VV E P + V
Sbjct: 390 GTFKPLCEGTNVYIPHKGRKVEFRVVKLVKEGEEAARKEEQPLRESRADVPTSQHYGYVG 449
Query: 645 PDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
+ +I D E + RE+ EE + + Y+D+GG +KQL +I+E++ELPL+
Sbjct: 450 DNAIITLDEEYLNREDYEEHTDDITYEDLGGMKKQLNKIRELIELPLK 497
>UniRef50_A2FTG5 Cluster: ATPase, AAA family protein; n=1;
Trichomonas vaginalis G3|Rep: ATPase, AAA family protein
- Trichomonas vaginalis G3
Length = 1041
Score = 84.6 bits (200), Expect = 3e-15
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 2/204 (0%)
Frame = +3
Query: 180 PNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVL--SDDNCPDE 353
P+ V++ D +V +S KM QL G V +K + KE++ + L S + CP
Sbjct: 4 PSAFFVDQCQKDGFNVF-MSPEKMAQLSFREGQVVRIK-TQSKESILVKLYSSKEECPIA 61
Query: 354 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFX 533
I++ V + V V I + ++++G+ G++ ++ +
Sbjct: 62 NIQIPRAVRNNIHCFLGQTVVVEAAEKVAKADDVIISAVSETIDGIDGSIIDLLYASNYD 121
Query: 534 EAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNA 713
PI RD V R +EFKVV P I+ VI +PI RE +
Sbjct: 122 FVGMPIRRDQIIPVYALNRVIEFKVVNCSPEEEVIIQDKEVILYRNQPIHRENIN--FST 179
Query: 714 VGYDDIGGCRKQLAQIKEMVELPL 785
V YD IGG KQ+ QI++++E PL
Sbjct: 180 VSYDSIGGLHKQIDQIRKLIEFPL 203
>UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPase;
n=1; Toxoplasma gondii|Rep: Transitional endoplasmic
reticulum ATPase - Toxoplasma gondii
Length = 792
Score = 74.1 bits (174), Expect = 4e-12
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 41/221 (18%)
Frame = +3
Query: 249 MEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPC 428
M LQ+ RGD VLL G+R++ETV I + D + + + D + + P
Sbjct: 1 MAALQVQRGDVVLLSGRRKRETVAIAMPDRSLEARHVVLHAHALKNIKLHAQDAIKVTPQ 60
Query: 429 PSVKYGKRVHILPIDDSV----EGLTGN-------------LFEVYLKPYFXEAYRPIHR 557
+ + +RV +LP D++ +G G E +F RP+
Sbjct: 61 RLLPHARRVFVLPFSDTLGDVRDGGAGRSEGRDRDAPGEKPSVEAVATKFFRHTSRPVKL 120
Query: 558 DDTFMV---------RGGMRAVEFKVVE-----TDPSPFCIVAPDTVIHCDGEPIKR--- 686
D F++ G VE KV++ D +V T + C+GEP+ R
Sbjct: 121 GDQFVLEFPVHAKGEHGATGKVEVKVMQIDTDGKDDQEVALVDDATELICEGEPLDRAVI 180
Query: 687 -------EEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
+ +A + + YDD+GG +K+L I+E+VELPLR
Sbjct: 181 FCVAPLPSAQFDASSMITYDDVGGLKKELNLIRELVELPLR 221
>UniRef50_A2FWK7 Cluster: ATPase, AAA family protein; n=1;
Trichomonas vaginalis G3|Rep: ATPase, AAA family protein
- Trichomonas vaginalis G3
Length = 2005
Score = 69.7 bits (163), Expect = 8e-11
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Frame = +3
Query: 201 EAVSDDNSVVA-LSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXX 377
+ V D N + A +S M L + G V ++ ++ +T+ + D PD IR+
Sbjct: 9 DKVDDFNDLNAYISNKAMNALGISDGSVVSVRNQQNSQTLVAIQGCD-MPDNVIRLSRCH 67
Query: 378 XXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFXEAYRPIHR 557
+ V I+ + + V + PI D++ G++GN ++ + + P++
Sbjct: 68 RINIGSFLGETVKISKPIKSQKAEIVLVAPIADTINGISGNFCDLIQESSYKFNNFPVYP 127
Query: 558 DDTFMVRGGMRAVEFKVVETDPS-PFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIG 734
+ F V R VEF+V++ PS IV V +P+ R + + YDDIG
Sbjct: 128 NFIFPVYTMQRVVEFQVIKCSPSGAHVIVTSADVFSSRSQPVNRTGQPH-FEGITYDDIG 186
Query: 735 GCRKQLAQIKEMVELPL 785
G L +++ +E PL
Sbjct: 187 GIDSSLKKVRTSIERPL 203
>UniRef50_A3CXI0 Cluster: AAA family ATPase, CDC48 subfamily; n=3;
Methanomicrobiales|Rep: AAA family ATPase, CDC48
subfamily - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 805
Score = 58.8 bits (136), Expect = 1e-07
Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 7/207 (3%)
Frame = +3
Query: 189 LIVEEAVSDDNSV--VALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIR 362
L V+ A +D L M QL+L GD V ++GKRR ++ K+R
Sbjct: 6 LKVDSAYPEDQGAGKARLDPDTMLQLRLNPGDLVAIEGKRRTVAKVWRAMVNDWHQSKVR 65
Query: 363 MXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFXEAY 542
+ D V I K V + P +D + L N V K
Sbjct: 66 IDNFTRLNTGASIGDRVKIRTLDEEAEAKLVVLAPPEDLPKQLPINYGSVVNKLIDF--- 122
Query: 543 RPIHRDDTFMVRGGM-----RAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 707
P+ ++D+ ++ G+ + V FK V +P I+ +T I +P E +
Sbjct: 123 -PVVKNDSVPIQAGLPFMQPQLVAFKAVVVEPENAVIITKNTKIEFSEKPAAGFE---GV 178
Query: 708 NAVGYDDIGGCRKQLAQIKEMVELPLR 788
+ Y+DIGG + +L +++E +ELP+R
Sbjct: 179 KRISYEDIGGLKGELQRVRETIELPMR 205
>UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putative;
n=1; Theileria parva|Rep: Cell division cycle protein
48, putative - Theileria parva
Length = 954
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/50 (44%), Positives = 35/50 (70%)
Frame = +3
Query: 636 IVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
++ ++VI G + RE +++ VGYDDIGG KQL++I+E++ELPL
Sbjct: 336 LIVGESVIDSSGNYLTRENHDDSYGEVGYDDIGGMNKQLSKIRELIELPL 385
Score = 48.8 bits (111), Expect = 2e-04
Identities = 29/97 (29%), Positives = 46/97 (47%)
Frame = +3
Query: 213 DDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXX 392
+ N V + +A+ +L + GD + +KG+RRK TVC V ++ ++
Sbjct: 154 NSNVNVRIGKAQANKLSVMPGDLLKVKGRRRKVTVCGVDVTESITKNEVSFHEDLRRNLR 213
Query: 393 XXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNL 503
DVV + +V K VHILP D++E L L
Sbjct: 214 LRLGDVVFMEKINTVPEAKFVHILPFKDTIEPLIKQL 250
>UniRef50_A7AVE1 Cluster: Cell division cycle protein ATPase,
putative; n=1; Babesia bovis|Rep: Cell division cycle
protein ATPase, putative - Babesia bovis
Length = 922
Score = 54.4 bits (125), Expect = 3e-06
Identities = 20/50 (40%), Positives = 37/50 (74%)
Frame = +3
Query: 636 IVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
+++ ++V+ C G + RE+ + + +GYD+IGG KQL++I+E++ELPL
Sbjct: 332 LISGESVLDCSGPSLTREQHDASYGELGYDEIGGMDKQLSKIRELIELPL 381
Score = 51.6 bits (118), Expect = 2e-05
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 180 PNRLIVEEAVSDDNSVVALSQAK--MEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDE 353
PN L V V D NS + + K +L + G+ V ++GK+R +TVC+V D N D
Sbjct: 133 PN-LFVLSGVFDGNSSIEIRMGKEPANKLGVAEGNLVRVRGKKRCDTVCVVGIDPNITDN 191
Query: 354 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSV 482
++ + DV+SI + K V ++P +DSV
Sbjct: 192 QVLIHSDTRRNLKLRTGDVMSIDLISDIPPAKLVKLMPFEDSV 234
>UniRef50_Q8THE2 Cluster: Cell division control protein 48; n=7;
cellular organisms|Rep: Cell division control protein 48
- Methanosarcina acetivorans
Length = 753
Score = 53.6 bits (123), Expect = 5e-06
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Frame = +3
Query: 189 LIVEEAVSDD--NSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSD-DNCPDEKI 359
L V EA D + + M+++ L GD + + G R +T IV + + + +I
Sbjct: 7 LRVAEAYHKDVGRGIARIDTRLMQEMGLVSGDIIEISG--RSKTYAIVWPNVERGQENRI 64
Query: 360 RMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFXEA 539
R+ D V+I + K+ +RV + P L G + E
Sbjct: 65 RIDGNLRSNAKVGIDDRVTIQKVQA-KHAQRVTLAP--SQPVRLVGGAHYILR---IIEG 118
Query: 540 YRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 719
RP+++ V + F V T P+ +V DT I + I EE + +
Sbjct: 119 -RPLNKGQQIRVETVNNPLTFVVASTRPAGPVVVTKDTEIVIKEKSI---EEIKTPEGIS 174
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
Y+DIGG R+++ ++EM+ELP+R
Sbjct: 175 YEDIGGLRREIQLVREMIELPMR 197
>UniRef50_A3H629 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Caldivirga maquilingensis IC-167|Rep: AAA family ATPase,
CDC48 subfamily - Caldivirga maquilingensis IC-167
Length = 852
Score = 53.6 bits (123), Expect = 5e-06
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 4/204 (1%)
Frame = +3
Query: 189 LIVEEAVSDD--NSVVALSQAKMEQLQLFRGDTVLLKGKRR--KETVCIVLSDDNCPDEK 356
L V EA S D +V + M ++ + GD V + G +R V SDD D
Sbjct: 10 LRVAEARSRDVGRGIVRVPMRLMRKIGIEPGDYVEISGNKRIAYAQVWPAYSDDEDKDI- 68
Query: 357 IRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFXE 536
IRM D+V + +++ +RV + P+ + ++ + YLK +
Sbjct: 69 IRMDGFIRQNIDVSLDDLVKVRKA-NLRPAQRVTVAPVGEEIK-----IDPDYLKKSYLV 122
Query: 537 AYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAV 716
+P+ R F + A++F + + P+P V +T + +P+ +E L V
Sbjct: 123 G-KPVWRGAIFELPYYTGALKFMITQVIPAPAAYVGTETEVTMQDKPV----QETNLPRV 177
Query: 717 GYDDIGGCRKQLAQIKEMVELPLR 788
++DIG + +I+E+VELPL+
Sbjct: 178 TWEDIGDLEEAKQKIRELVELPLK 201
>UniRef50_Q0W6B6 Cluster: Putative cell division cycle protein 48;
n=1; uncultured methanogenic archaeon RC-I|Rep: Putative
cell division cycle protein 48 - Uncultured methanogenic
archaeon RC-I
Length = 942
Score = 51.6 bits (118), Expect = 2e-05
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 6/206 (2%)
Frame = +3
Query: 189 LIVEEAVSDD--NSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEK-- 356
L V+EA D + + M QL + GD + ++GK T + P E+
Sbjct: 9 LRVQEAYHRDVGRGIARIDMETMRQLGMVSGDIIEIEGKGAIATAVVW---PGYPSEEGK 65
Query: 357 --IRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 530
I + D V + + K +R+ + P +TG E YL
Sbjct: 66 GVILIDGNIRSNARVGIDDRVKVRKIQAKK-AERITLAPTQPV--RITGG--EYYLLKLL 120
Query: 531 XEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALN 710
RPI + V + F V T P+ I T + +P++ E+ E+ +
Sbjct: 121 EG--RPISKGQAIRVEMLGSPMTFVVTNTRPAGTVIADMSTEVTISEKPVEAEKAEKTPH 178
Query: 711 AVGYDDIGGCRKQLAQIKEMVELPLR 788
+ Y+DIGG R+++ ++EM+ELPLR
Sbjct: 179 -ISYEDIGGLRREIGLVREMIELPLR 203
>UniRef50_Q4UBT9 Cluster: Cell divison cycle CDC48 homologue,
putative or transitional endoplasmic reticulum ATPase,
putative; n=1; Theileria annulata|Rep: Cell divison
cycle CDC48 homologue, putative or transitional
endoplasmic reticulum ATPase, putative - Theileria
annulata
Length = 905
Score = 51.2 bits (117), Expect = 3e-05
Identities = 22/50 (44%), Positives = 36/50 (72%)
Frame = +3
Query: 636 IVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
++ ++VI G + RE+++ + VGYDDIGG KQL++I+E++ELPL
Sbjct: 312 LIVGESVIDSGGNYLSREDDD-SFGEVGYDDIGGMNKQLSKIRELIELPL 360
Score = 46.8 bits (106), Expect = 6e-04
Identities = 27/97 (27%), Positives = 45/97 (46%)
Frame = +3
Query: 213 DDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXX 392
+ N V + + + +L L GD V ++G+RRK TVC V ++ ++
Sbjct: 129 NSNVNVKIGKEQANKLNLMTGDFVKVRGRRRKVTVCGVDVTESITKNEVSFHEDLRRNLR 188
Query: 393 XXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNL 503
D+V + ++ K VHILP D++E L L
Sbjct: 189 LRLGDIVFMDKINTIPEAKIVHILPFKDTIEPLIKQL 225
>UniRef50_A0RUY9 Cluster: AAA ATPase; n=2; Thermoprotei|Rep: AAA
ATPase - Cenarchaeum symbiosum
Length = 724
Score = 49.2 bits (112), Expect = 1e-04
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 2/209 (0%)
Frame = +3
Query: 168 RKDRPNRLIVEEAVSDD--NSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDN 341
RKD P ++ V EA D + M++L++ GD + + G R V +D
Sbjct: 3 RKDGPLQMRVGEAKQRDVGKKRARIGPEAMDRLKVTPGDIIEIAGSRPSCAVVWPNDEDE 62
Query: 342 CPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLK 521
E +R+ +D V I + K K V + P SV F ++K
Sbjct: 63 RSPEVVRIDGQTRKNVGAAINDAVRIRRIQA-KAAKSVILAPASGSVT--VDKEFADFVK 119
Query: 522 PYFXEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEE 701
P+ + D V +++FK+ +T P + T + I E E
Sbjct: 120 NRLKGL--PLSQGDEISVMILGNSIDFKIGKTTPRSVVRMDRSTSLS-----ILTEAPES 172
Query: 702 ALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
V Y+++GG ++ ++E+VELPLR
Sbjct: 173 KKARVTYEEVGGLESEIRAMREIVELPLR 201
>UniRef50_Q2RI39 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Moorella thermoacetica ATCC 39073|Rep: AAA family
ATPase, CDC48 subfamily - Moorella thermoacetica (strain
ATCC 39073)
Length = 730
Score = 48.0 bits (109), Expect = 3e-04
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 3/204 (1%)
Frame = +3
Query: 186 RLIVEEAVSDD--NSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKI 359
+L V E + +D +V + M++L L D V + GKR + D CP I
Sbjct: 8 KLRVCEGMVEDARKGIVRVLTPVMDELGLKPNDVVAITGKRTTVARIMPAFQDGCPPGNI 67
Query: 360 RMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFX-E 536
+M + V+++P + + V + P+ L G V+LK +
Sbjct: 68 QMDGLQRQNAQVGIGEGVTLSPV-EWETARTVVLAPVLPGWT-LGGEHEIVHLKKHLIGR 125
Query: 537 AYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAV 716
A P + GG A F V P ++ DT + G E E V
Sbjct: 126 AVVPGDQVTIPQFSGGDEA--FTVEGAAPRGAVVITRDTAVRFKGG----EATEGRGQRV 179
Query: 717 GYDDIGGCRKQLAQIKEMVELPLR 788
Y+DIGG +++ +++E++ELPL+
Sbjct: 180 TYEDIGGLAREVQRVREIIELPLK 203
>UniRef50_Q74M89 Cluster: NEQ475; n=1; Nanoarchaeum equitans|Rep:
NEQ475 - Nanoarchaeum equitans
Length = 826
Score = 48.0 bits (109), Expect = 3e-04
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 8/209 (3%)
Frame = +3
Query: 186 RLIVEEAVSDDNSV--VALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKI 359
+L V EA +D + V + +++L L GD + ++G R+ + VL ++ I
Sbjct: 10 KLKVAEAYQEDVYLGKVRVDYDVLDRLGLSPGDIIEIEGTRKTYAIADVLYPEDQGLGII 69
Query: 360 RMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFXEA 539
RM + V + P + K+V + P+ + + + L F
Sbjct: 70 RMDGVIRKNAGVGVGEYVIVRKPPKPQIAKKVVLAPVKKEEQIIIDEYYLRNLLNGFVVT 129
Query: 540 ---YRPIHRDDT--FMVRGGMRAVEFKVVETDPSPF-CIVAPDTVIHCDGEPIKREEEEE 701
Y + D+ F+ ++ + FKVV T+P I+ DT+I IK +E
Sbjct: 130 KGDYVVVRFDNLGFFIDFLPLKEMWFKVVSTNPPKGPVIIGRDTIIE-----IKPGGVQE 184
Query: 702 ALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
+ V Y+DIGG + + +++E+VELPLR
Sbjct: 185 -IPEVTYEDIGGMKDVIQKVRELVELPLR 212
>UniRef50_Q58556 Cluster: Cell division cycle protein 48 homolog
MJ1156; n=64; cellular organisms|Rep: Cell division
cycle protein 48 homolog MJ1156 - Methanococcus
jannaschii
Length = 903
Score = 48.0 bits (109), Expect = 3e-04
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 3/203 (1%)
Frame = +3
Query: 189 LIVEEAVSDD--NSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSD-DNCPDEKI 359
L V EA D + + ME+L L GD + ++G + K + ++ I
Sbjct: 5 LKVAEAYQGDVGRGIARIDPYTMEELGLKPGDVIEIEGPKGKAYAIVYRGFLEDAGKGII 64
Query: 360 RMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFXEA 539
R+ D V + +K K+V + P G G FE ++K
Sbjct: 65 RIDGYLRQNAGVAIGDRVKVKRV-EIKEAKKVVLAPTQPIRFG-PG--FEDFVKRKILGQ 120
Query: 540 YRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 719
T V G A+ F VV T P+ V T + EP+ E +E + V
Sbjct: 121 VLSKGSKVTIGVLG--TALTFVVVSTTPAGPVRVTDFTHVELKEEPVS-EIKETKVPDVT 177
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
Y+DIGG ++++ +++EM+ELP+R
Sbjct: 178 YEDIGGLKEEVKKVREMIELPMR 200
>UniRef50_Q9HPU1 Cluster: Cell division cycle protein; n=5;
Euryarchaeota|Rep: Cell division cycle protein -
Halobacterium salinarium (Halobacterium halobium)
Length = 759
Score = 47.6 bits (108), Expect = 4e-04
Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 14/202 (6%)
Frame = +3
Query: 225 VVALSQAKMEQLQLFRGDTVLLKGK----RRKETVCIVLSDDNCPDEKIRMXXXXXXXXX 392
+ A+ + M++L L GD V++ G+ R V +D+ D +R+
Sbjct: 17 LAAVDRDSMDELALENGDYVVIDGQGDHGRAVARVWPGYPEDD-GDGVVRIDGRLRKEAD 75
Query: 393 XXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYL--KPYFXEAYRPIHRDDT 566
D V++ P G LP + V G + L +P PI
Sbjct: 76 VGIDDQVTVEPADIKPAGGVTVALPQNLRVRGNIAPMVRDRLNGRPVTAGQTIPISFGFG 135
Query: 567 FMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKR--------EEEEEALNAVGY 722
M + + K+ ET+PS +V+ DT I P + E + V Y
Sbjct: 136 GMSTISGQQIPVKIAETEPSGTVVVSNDTEIQLSERPAEEIAPGAGEAAETGDPTPNVTY 195
Query: 723 DDIGGCRKQLAQIKEMVELPLR 788
+DIGG +L Q++EM+ELP+R
Sbjct: 196 EDIGGLDGELEQVREMIELPMR 217
>UniRef50_Q5CJ12 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 413
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +3
Query: 447 KRVHILPIDDSV-EGLTGNLFEVYLKPYFXE-AYRPIHRDDTFMVRGGMRAVEFKVVETD 620
KR+H++P D++ + + ++F+ YLKP+ + P ++F G V+FK++ TD
Sbjct: 202 KRIHVMPFSDTLPQTYSFDIFQDYLKPFLSRYTFHPFSEGESFTYNG----VQFKIIATD 257
Query: 621 PSPF-CIVAPDTVIHCDG 671
P+ + +T I+C G
Sbjct: 258 PAGVKARIGDNTTIYCQG 275
>UniRef50_Q2FMV5 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Methanospirillum hungatei JF-1|Rep: AAA family ATPase,
CDC48 subfamily - Methanospirillum hungatei (strain JF-1
/ DSM 864)
Length = 801
Score = 46.4 bits (105), Expect = 8e-04
Identities = 25/82 (30%), Positives = 43/82 (52%)
Frame = +3
Query: 543 RPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGY 722
RP+ T + V F V +P +V T + + P + EE++ ++ Y
Sbjct: 122 RPVIEGQTVRIDLIGNTVTFIVSSLEPRGTGVVTFTTEVILNDTPYQTEEKKSEELSIHY 181
Query: 723 DDIGGCRKQLAQIKEMVELPLR 788
+DIGG ++++ I+EMVE+PLR
Sbjct: 182 EDIGGLSREISLIREMVEIPLR 203
>UniRef50_Q9UYZ7 Cluster: ATPase of the AAA+ family; n=12;
Euryarchaeota|Rep: ATPase of the AAA+ family -
Pyrococcus abyssi
Length = 840
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +3
Query: 582 GMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQI 761
G ++F VV T P + +T + + + E EE + V Y+DIGG ++ + +I
Sbjct: 167 GFGELKFMVVNTIPKGIVQITYNTEVEVLPQAV--EVREEKIPEVTYEDIGGLKEAIEKI 224
Query: 762 KEMVELPLR 788
+EMVELPL+
Sbjct: 225 REMVELPLK 233
>UniRef50_A2SR43 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Methanocorpusculum labreanum Z|Rep: AAA family ATPase,
CDC48 subfamily - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 826
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +3
Query: 594 VEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMV 773
+EFKV +P CI+ T + ++E + A+ Y+DIGG + +L +++EM+
Sbjct: 141 LEFKVSAIEPENACILNKMTEL-----VFNDDDEFDGTKAITYEDIGGLKGELKRVREMI 195
Query: 774 ELPLR 788
ELP+R
Sbjct: 196 ELPIR 200
>UniRef50_A1HPK1 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Thermosinus carboxydivorans Nor1|Rep: AAA family ATPase,
CDC48 subfamily - Thermosinus carboxydivorans Nor1
Length = 720
Score = 43.6 bits (98), Expect = 0.006
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +3
Query: 582 GMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQI 761
G RA F V+ T P ++ T I K + +E+ Y+D+GG K+L +I
Sbjct: 139 GARAQYFTVIGTSPQGPVVINAATKITVT----KPDVQEDMSYCASYEDVGGLDKELQRI 194
Query: 762 KEMVELPLR 788
+EM+ELPL+
Sbjct: 195 REMIELPLK 203
>UniRef50_Q1GSQ3 Cluster: AAA family ATPase, CDC48 subfamily; n=15;
cellular organisms|Rep: AAA family ATPase, CDC48
subfamily - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 773
Score = 42.7 bits (96), Expect = 0.010
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 22/228 (9%)
Frame = +3
Query: 171 KDRPNRLIVEEAVSDDNS--VVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNC 344
K++ +L V A ++++ + + +A M +L L GD V + GKR + + ++
Sbjct: 7 KEKQVKLQVANARAEESGGGIARIPRAAMAELGLSEGDVVQISGKRDTASRVVAPYPEDE 66
Query: 345 PDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKP 524
IR+ D+V ++ + + RV P +++ L G+ +
Sbjct: 67 GLNVIRLDGLQRANAGAGAGDMVVLSRVET-RPATRVVFAPAQENLR-LQGSA-NALKRS 123
Query: 525 YFXEAYRPIHRDDTFMVRGGMRA--------------------VEFKVVETDPSPFCIVA 644
+F RP+ DT G R E +++ SP +V
Sbjct: 124 FFG---RPLVAGDTVATAGQQRVSAGDMPPQLRQMLNAPAYALAEVRLLVVSASPKGVVT 180
Query: 645 PDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
D + P +E + V YDD+GG + + Q++EMVELPLR
Sbjct: 181 IDENTEVELLPEYQEPHDARRTDVTYDDLGGLGETIDQLREMVELPLR 228
>UniRef50_Q8PZP5 Cluster: Cell division control protein; n=4;
Euryarchaeota|Rep: Cell division control protein -
Methanosarcina mazei (Methanosarcina frisia)
Length = 792
Score = 41.5 bits (93), Expect = 0.023
Identities = 49/219 (22%), Positives = 95/219 (43%), Gaps = 18/219 (8%)
Frame = +3
Query: 186 RLIVEEAVSDD--NSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKI 359
+L VE+A D ++ L + +LQL GD V ++GK+ K T + +D ++ I
Sbjct: 5 QLKVEKAYPIDLGRGIIRLDPTALLKLQLSPGDIVEIRGKK-KTTAKVWRADRQDWEQGI 63
Query: 360 -RMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLT---GNLFEVYLKPY 527
R+ + V+I + + K + LP + G G +K +
Sbjct: 64 VRIDNFIRQNAGVSIGEKVTIKKVEAPEAKKLILALPESMTQGGPELQFGEHANEIIKRH 123
Query: 528 FXEAYRPIHRDDTFMVRGGM-----------RAVEFKVVETDPSPFCIVAPDTV-IHCDG 671
+ RP+ + D + M + + VETDP+ ++ +T I
Sbjct: 124 ILK--RPVFKGDIIPIINSMSQPMTESLTTSQVIPLVAVETDPANTIVLITETTNIELRK 181
Query: 672 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
+P++ E+ Y+DIGG ++ +++EM+E+P++
Sbjct: 182 KPVQGYEKATR-GVTTYEDIGGLGDEIMRVREMIEMPMK 219
>UniRef50_A4YMQ0 Cluster: Putative Vesicle-fusing ATPase; n=1;
Bradyrhizobium sp. ORS278|Rep: Putative Vesicle-fusing
ATPase - Bradyrhizobium sp. (strain ORS278)
Length = 714
Score = 39.5 bits (88), Expect = 0.094
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +3
Query: 582 GMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQI 761
G + +V T PS ++ +T + I E +A ++ Y+D+GG ++L ++
Sbjct: 142 GGNSTSCEVTATRPSGPVLITTETRLD-----ISAREVGDADRSITYEDLGGVDQELQRV 196
Query: 762 KEMVELPLR 788
+EMVELPLR
Sbjct: 197 REMVELPLR 205
>UniRef50_Q8TY20 Cluster: ATPase of the AAA+ class; n=1;
Methanopyrus kandleri|Rep: ATPase of the AAA+ class -
Methanopyrus kandleri
Length = 1249
Score = 39.1 bits (87), Expect = 0.12
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +3
Query: 606 VVETDPSPFCIVAPDTVIHCDGEPIKREEEEEA-LNAVGYDDIGGCRKQLAQIKEMVELP 782
VV +P ++ P+T I +P + + A + V YDDIGG +++ I+E VELP
Sbjct: 177 VVGIEPEDATVIGPETEIEV--KPYSEDLAKAAEIPDVTYDDIGGLDREIELIREYVELP 234
Query: 783 LR 788
L+
Sbjct: 235 LK 236
>UniRef50_A2QZY1 Cluster: Remark: Cdc48p of S. cerevisiae is more
than twice the length of this protein; n=1; Aspergillus
niger|Rep: Remark: Cdc48p of S. cerevisiae is more than
twice the length of this protein - Aspergillus niger
Length = 302
Score = 38.3 bits (85), Expect = 0.22
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +3
Query: 477 SVEGLTGNLFEVYLKPYFXEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTV 656
+ E L+G L ++ PYF R I+ D + G +EFKV+ P + V T
Sbjct: 179 TTENLSGRLLHDFVNPYFTRCTRLINVHDHIFISSGACDIEFKVLSIKPLEYGFVTQKTN 238
Query: 657 IHCDG 671
I G
Sbjct: 239 IVLSG 243
>UniRef50_Q653E3 Cluster: Putative 26S protease regulatory subunit
6B; n=2; Oryza sativa|Rep: Putative 26S protease
regulatory subunit 6B - Oryza sativa subsp. japonica
(Rice)
Length = 448
Score = 37.9 bits (84), Expect = 0.29
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 714 VGYDDIGGCRKQLAQIKEMVELPL 785
V YDDIGGC Q +++E VELPL
Sbjct: 187 VAYDDIGGCEAQKREVREAVELPL 210
>UniRef50_Q6N2G6 Cluster: AAA ATPase; n=2; Rhodopseudomonas
palustris|Rep: AAA ATPase - Rhodopseudomonas palustris
Length = 663
Score = 37.5 bits (83), Expect = 0.38
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
YDD+GG +++A ++EMVELPLR
Sbjct: 124 YDDVGGLAREVALVREMVELPLR 146
>UniRef50_UPI0001555990 Cluster: PREDICTED: similar to
spermatogenesis associated 5; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to spermatogenesis
associated 5 - Ornithorhynchus anatinus
Length = 475
Score = 37.1 bits (82), Expect = 0.50
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 714 VGYDDIGGCRKQLAQIKEMVELPLR 788
V YD IGG +QL +I+E+VELPLR
Sbjct: 184 VTYDSIGGLGRQLQEIRELVELPLR 208
>UniRef50_A5K794 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 615
Score = 36.7 bits (81), Expect = 0.66
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 447 KRVHILPIDDSVEGLTG-NLFEVYLKPYFXEAYRPI-HRDDTFMVRGGMRAVEFKVVETD 620
+ VHI+P+ D++ N+F Y+KPY Y + DTF +G V+FK++ D
Sbjct: 370 RNVHIVPLYDTLPTTYNYNIFADYIKPYIERHYLSLFSMHDTFFYKG----VQFKIMGID 425
Query: 621 P 623
P
Sbjct: 426 P 426
>UniRef50_Q9HPG1 Cluster: Cell division cycle protein; n=1;
Halobacterium salinarum|Rep: Cell division cycle protein
- Halobacterium salinarium (Halobacterium halobium)
Length = 394
Score = 35.9 bits (79), Expect = 1.2
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +3
Query: 678 IKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
+K EE +++ GYDD+GG + ++K++VE+PLR
Sbjct: 137 LKDPEEISEVDS-GYDDVGGLTDTIEEVKDVVEIPLR 172
>UniRef50_A4YDZ5 Cluster: Vesicle-fusing ATPase; n=2;
Sulfolobaceae|Rep: Vesicle-fusing ATPase -
Metallosphaera sedula DSM 5348
Length = 703
Score = 35.5 bits (78), Expect = 1.5
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 597 EFKVVETDP-SPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMV 773
EF VV +P + ++ +T I GE IK+ ++ L V +D+GG Q+ +KE++
Sbjct: 132 EFAVVSFEPRAEVGMIVGETEIEITGEIIKQTQKNIPL--VSLEDVGGLTDQIMSLKEII 189
Query: 774 ELPL 785
++ L
Sbjct: 190 DIAL 193
>UniRef50_P35998 Cluster: 26S protease regulatory subunit 7; n=130;
Eukaryota|Rep: 26S protease regulatory subunit 7 - Homo
sapiens (Human)
Length = 433
Score = 35.5 bits (78), Expect = 1.5
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +3
Query: 714 VGYDDIGGCRKQLAQIKEMVELPL 785
V Y D+GGC++Q+ +++E+VE PL
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPL 195
>UniRef50_Q9AW43 Cluster: 26S proteasome AAA-ATPase subunit; n=1;
Guillardia theta|Rep: 26S proteasome AAA-ATPase subunit
- Guillardia theta (Cryptomonas phi)
Length = 395
Score = 35.1 bits (77), Expect = 2.0
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +3
Query: 609 VETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 782
V DPS I+ VI +PI E + + V +GG KQ+ QIKE++ELP
Sbjct: 102 VALDPSTLTIMK---VIKNKVDPIIEEMMKSSNKKVELYHVGGLEKQIKQIKELIELP 156
>UniRef50_Q7QYT8 Cluster: GLP_70_13103_11571; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_70_13103_11571 - Giardia lamblia
ATCC 50803
Length = 510
Score = 35.1 bits (77), Expect = 2.0
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPL 785
Y DIGGC KQL I+E +ELPL
Sbjct: 248 YRDIGGCAKQLKLIRESLELPL 269
>UniRef50_Q8TDL7 Cluster: Spermatogenesis associated factor; n=35;
Eumetazoa|Rep: Spermatogenesis associated factor - Homo
sapiens (Human)
Length = 893
Score = 35.1 bits (77), Expect = 2.0
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 681 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
K +E++ V YD IGG QL I+E++ELPL+
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLK 374
>UniRef50_Q8TX03 Cluster: Proteasome-activating nucleotidase; n=29;
Archaea|Rep: Proteasome-activating nucleotidase -
Methanopyrus kandleri
Length = 436
Score = 35.1 bits (77), Expect = 2.0
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 714 VGYDDIGGCRKQLAQIKEMVELPLR 788
V YDDIGG +Q+ +I+E+VE PL+
Sbjct: 176 VSYDDIGGLDEQIREIREVVEKPLK 200
>UniRef50_Q7R4L3 Cluster: GLP_49_27747_26542; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_49_27747_26542 - Giardia lamblia
ATCC 50803
Length = 401
Score = 34.7 bits (76), Expect = 2.7
Identities = 12/23 (52%), Positives = 20/23 (86%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
YDDIGG KQ+ +++E++ELP++
Sbjct: 142 YDDIGGLSKQVLELREILELPIK 164
>UniRef50_Q4UAE5 Cluster: 26S proteasome ATPase subunit, putative;
n=1; Theileria annulata|Rep: 26S proteasome ATPase
subunit, putative - Theileria annulata
Length = 448
Score = 34.7 bits (76), Expect = 2.7
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 687 EEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
EE+EE + Y+ IGG KQ+ +++E++ELPL+
Sbjct: 182 EEKEEEKDT--YNSIGGLNKQIKEMREVIELPLK 213
>UniRef50_Q5V0R7 Cluster: Cell division cycle protein 48; n=1;
Haloarcula marismortui|Rep: Cell division cycle protein
48 - Haloarcula marismortui (Halobacterium marismortui)
Length = 695
Score = 34.7 bits (76), Expect = 2.7
Identities = 45/198 (22%), Positives = 75/198 (37%), Gaps = 4/198 (2%)
Frame = +3
Query: 204 AVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXX 383
+V + N +A+ +L L VL++ +R + V D+ P E R+
Sbjct: 10 SVDEANESIAVPTTVGTRLGLGGNGAVLIRKQRGQVQAATVRQADSVPAETARVGPQTAE 69
Query: 384 XXXXXXSDVVSI-APCPSVKYGKRVHILPIDD-SVEGLTGNLFEVYLKPYFXEAYRPIHR 557
D V++ A P+V + + P+ S+ G G + + RP+
Sbjct: 70 TLGLRDGDRVTVEAADPAV--ATHISVAPVPQLSIRGGEGLVRDAV-------GDRPLLD 120
Query: 558 DDTFMVR--GGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDI 731
DT V G V +VV T P+ + DTVI P R L+ + +
Sbjct: 121 GDTITVSLFDGSLTVPVRVVSTQPAGPVTLVDDTVIEITDGPAPR-RSNSGLDPLAETAV 179
Query: 732 GGCRKQLAQIKEMVELPL 785
GG +A ++ V L
Sbjct: 180 GGYADTVATLETAVSTAL 197
>UniRef50_A7BC87 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 514
Score = 34.3 bits (75), Expect = 3.5
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = +3
Query: 672 EPIKREEEEEALNA----VGYDDIGGCRKQLAQIKEMVELP 782
E I RE+ E+ L V Y+DIGG Q+AQ+++ +E+P
Sbjct: 165 ERIVREDVEQLLTPEVPDVTYEDIGGLDDQIAQVRDSIEMP 205
>UniRef50_Q7RTI8 Cluster: Putative uncharacterized protein PY00003;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY00003 - Plasmodium yoelii yoelii
Length = 628
Score = 34.3 bits (75), Expect = 3.5
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 453 VHILPIDDSVEGLTG-NLFEVYLKPYFXEAY-RPIHRDDTFMVRGGMRAVEFKVVETDP 623
VHI+P+ D++ NLF Y+KPY Y DTF RG V+FK++ +P
Sbjct: 372 VHIVPLYDTLPTTYNYNLFIDYIKPYIERHYLNTFSIYDTFFYRG----VQFKIMGVEP 426
>UniRef50_UPI00005A005D Cluster: PREDICTED: similar to ankyrin
repeat domain 26; n=8; Canis lupus familiaris|Rep:
PREDICTED: similar to ankyrin repeat domain 26 - Canis
familiaris
Length = 1040
Score = 33.9 bits (74), Expect = 4.7
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Frame = +3
Query: 117 KWQIIKVLMIYRPRSSDRKDRPNRLIVEEAVS-DDNSVVALSQAKMEQLQLFRGD--TVL 287
K Q I+ L+++ +++DR NR + A + +V L + QL L G+ T L
Sbjct: 215 KMQEIQQLLVFGLHDLNKRDRKNRTALHLACAIGREDMVKLLVDRHCQLNLCDGEDRTAL 274
Query: 288 LKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIA 422
+K + +E C+ L ++ D K++ +VSIA
Sbjct: 275 VKAIQCQEEACVTLLLEHGADPKVKDNKGNTALHYAAHEGIVSIA 319
>UniRef50_Q7R1G9 Cluster: GLP_38_50730_51935; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_38_50730_51935 - Giardia lamblia
ATCC 50803
Length = 401
Score = 33.9 bits (74), Expect = 4.7
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 708 NAVGYDDIGGCRKQLAQIKEMVELPLR 788
+AV Y DIGG ++ IKE +ELPLR
Sbjct: 133 DAVTYADIGGLHDEIKLIKESIELPLR 159
>UniRef50_Q7QTA1 Cluster: GLP_15_26945_31573; n=3; root|Rep:
GLP_15_26945_31573 - Giardia lamblia ATCC 50803
Length = 1542
Score = 33.5 bits (73), Expect = 6.2
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
Frame = -1
Query: 486 PQLN-HQLAVCGLVFHISLKDTELWIPHQKDAHEGCFSRHGSSEFSH-------QGNYHL 331
P +N + +++ G + S K+ +P HEG FS E+ H G Y
Sbjct: 1125 PHMNPYTISISGTRYEFSTKNDTYTVPFPLTVHEGRFSVPTKIEYFHPDRPTCKDGEYAW 1184
Query: 330 RARCKRFPCGVCL*ARLCHHGRVEVAP 250
R + F C +C C G + P
Sbjct: 1185 RLQTGAFTCMICPTGYFCSEGVMNPCP 1211
>UniRef50_P62191 Cluster: 26S protease regulatory subunit 4; n=119;
Eukaryota|Rep: 26S protease regulatory subunit 4 - Homo
sapiens (Human)
Length = 440
Score = 33.5 bits (73), Expect = 6.2
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 654 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
V+ D +P+ + E Y DIGG Q+ +IKE VELPL
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPL 205
>UniRef50_UPI0000E45FEB Cluster: PREDICTED: similar to
calcium-activated potassium channel alpha subunit; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
calcium-activated potassium channel alpha subunit -
Strongylocentrotus purpuratus
Length = 1307
Score = 33.1 bits (72), Expect = 8.2
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +3
Query: 165 DRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTV----LLKGKRRKETVCIVLS 332
DR D +I+ + D + AL + QLQ F+G + L + K + C+VL
Sbjct: 458 DRDDVNVEIIILDTAVPDLELQALFKRHFTQLQYFQGSVLNSVDLERVKMKDADGCLVLC 517
Query: 333 DDNCPD 350
D CPD
Sbjct: 518 DKYCPD 523
>UniRef50_UPI00015A3E7F Cluster: spermatogenesis associated factor
SPAF; n=2; Danio rerio|Rep: spermatogenesis associated
factor SPAF - Danio rerio
Length = 526
Score = 33.1 bits (72), Expect = 8.2
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 684 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
R+E+++ + V Y IGG R QL I+E +ELPL+
Sbjct: 293 RDEQDQG-SKVTYSMIGGLRGQLEVIRETIELPLK 326
>UniRef50_P62333 Cluster: 26S protease regulatory subunit S10B;
n=129; Eukaryota|Rep: 26S protease regulatory subunit
S10B - Homo sapiens (Human)
Length = 389
Score = 33.1 bits (72), Expect = 8.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 672 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
+P+ E V Y +IGG +Q+ +++E++ELPL
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPL 153
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,104,267
Number of Sequences: 1657284
Number of extensions: 15440284
Number of successful extensions: 42220
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 40599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42191
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67085240885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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