Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_D02
(789 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 307 8e-84
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 305 2e-83
08_02_0657 - 19749835-19751942,19753123-19753561 233 2e-61
09_06_0271 + 21959213-21960559 38 0.009
06_01_0646 + 4678422-4678508,4679042-4679123,4679236-4679327,467... 37 0.021
02_05_0986 - 33334205-33334362,33334487-33334662,33334774-333349... 37 0.021
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602... 33 0.26
07_03_1770 - 29382508-29382591,29382901-29383041,29383134-293835... 32 0.45
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 32 0.45
02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592... 32 0.45
03_02_0691 + 10432615-10433109,10433155-10433216,10433526-104335... 32 0.60
07_03_1644 - 28338535-28339103,28339512-28340326,28341104-283412... 29 3.2
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 29 3.2
06_03_0711 + 23798998-23799106,23799838-23799957,23800181-238003... 29 5.6
02_01_0754 - 5595813-5595887,5595973-5596071,5596136-5596327,559... 29 5.6
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 28 7.4
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 28 7.4
08_02_0113 - 12715888-12716181,12717443-12717602,12718327-127183... 28 9.7
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 307 bits (753), Expect = 8e-84
Identities = 139/208 (66%), Positives = 169/208 (81%)
Frame = +3
Query: 165 DRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNC 344
+RK PNRL+V+EA +DDNSV+ + ME+LQLFRGDTVLLKGK+RK+T+CIVL+DD C
Sbjct: 25 ERKKSPNRLVVDEATNDDNSVIGMHPDTMEKLQLFRGDTVLLKGKKRKDTICIVLADDTC 84
Query: 345 PDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKP 524
+ KIRM DVVS+ CP VKYGKRVHILPIDD+VEG+TGNLF+ +LKP
Sbjct: 85 EEPKIRMNKVVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDAFLKP 144
Query: 525 YFXEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEA 704
YF EAYRP+ + D F+VRGGMR+VEFKV+ETDP+ +CIVAPDT I CDGEPIKRE+EE
Sbjct: 145 YFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAEYCIVAPDTEIFCDGEPIKREDEER- 203
Query: 705 LNAVGYDDIGGCRKQLAQIKEMVELPLR 788
L+ VGYDD+GG RKQ+AQI+E+VELPLR
Sbjct: 204 LDEVGYDDVGGVRKQMAQIRELVELPLR 231
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 305 bits (749), Expect = 2e-83
Identities = 140/208 (67%), Positives = 169/208 (81%)
Frame = +3
Query: 165 DRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNC 344
+RK PNRL+V+EA +DDNSVVAL ME+LQLFRGDTVLLKGK+RK+T+CIVL+D+ C
Sbjct: 25 ERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLADETC 84
Query: 345 PDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKP 524
+ KIRM DVVS+ C VKYGKRVHILPIDD+VEG+TGNLF+ +LKP
Sbjct: 85 EEPKIRMNKVVRKNLRVRLGDVVSVHQCQDVKYGKRVHILPIDDTVEGITGNLFDAFLKP 144
Query: 525 YFXEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEA 704
YF EAYRP+ + D F+VRGGMR+VEFKV+ETDP+ +CIVAPDT I CDGEPIKRE+EE
Sbjct: 145 YFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPTEYCIVAPDTEIFCDGEPIKREDEER- 203
Query: 705 LNAVGYDDIGGCRKQLAQIKEMVELPLR 788
L+ VGYDD+GG RKQ+AQI+E+VELPLR
Sbjct: 204 LDEVGYDDVGGVRKQMAQIRELVELPLR 231
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 233 bits (569), Expect = 2e-61
Identities = 112/212 (52%), Positives = 153/212 (72%), Gaps = 5/212 (2%)
Frame = +3
Query: 168 RKDRPNRLIVEEA---VSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDD 338
+K PNRL+ ++A V+ DNS V LS+A ME+L +FRGD V L+G+RR+E VC D+
Sbjct: 26 KKKSPNRLMADDAEGGVAVDNSTVTLSEATMEELGIFRGDLVTLRGRRRREAVCYAQKDE 85
Query: 339 NCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYL 518
+CPD ++R+ D+V++ PCP+++ KRV + P DDSVEG++G+LFE YL
Sbjct: 86 SCPDGRLRLSRGVRSNLHVRLGDLVTVKPCPTIRNAKRVQLRPFDDSVEGISGDLFEPYL 145
Query: 519 KPYFXEAYRPIHRDDTFMVRGGMRAVEFKVVETDP-SPFCIVAPDTVIHCD-GEPIKREE 692
KPYF +A RP+ + D F+VRG M AVEFKV++T+P + IVA DT I CD G+P+KRE+
Sbjct: 146 KPYFMDALRPVKKGDRFLVRGHMHAVEFKVMDTEPNNEPVIVAGDTEIFCDEGDPVKRED 205
Query: 693 EEEALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
EE L+ GYDD+GG RKQLAQI+E+VELPLR
Sbjct: 206 EER-LDGPGYDDVGGVRKQLAQIRELVELPLR 236
>09_06_0271 + 21959213-21960559
Length = 448
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 714 VGYDDIGGCRKQLAQIKEMVELPL 785
V YDDIGGC Q +++E VELPL
Sbjct: 187 VAYDDIGGCEAQKREVREAVELPL 210
>06_01_0646 +
4678422-4678508,4679042-4679123,4679236-4679327,
4679441-4679518,4679635-4679696,4680272-4680993,
4681115-4681272
Length = 426
Score = 36.7 bits (81), Expect = 0.021
Identities = 12/24 (50%), Positives = 22/24 (91%)
Frame = +3
Query: 714 VGYDDIGGCRKQLAQIKEMVELPL 785
V Y+D+GGC++Q+ +++E+VELP+
Sbjct: 165 VTYNDVGGCKEQIEKMREVVELPM 188
>02_05_0986 -
33334205-33334362,33334487-33334662,33334774-33334955,
33335064-33335282,33335407-33335551,33336127-33336188,
33336282-33336359,33336517-33336608,33337086-33337167,
33337519-33337605
Length = 426
Score = 36.7 bits (81), Expect = 0.021
Identities = 12/24 (50%), Positives = 22/24 (91%)
Frame = +3
Query: 714 VGYDDIGGCRKQLAQIKEMVELPL 785
V Y+D+GGC++Q+ +++E+VELP+
Sbjct: 165 VTYNDVGGCKEQIEKMREVVELPM 188
>02_02_0700 +
13058446-13058790,13059352-13059582,13060083-13060241,
13060483-13060635,13061619-13061702,13061847-13061915,
13062374-13062421,13062487-13062621
Length = 407
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 714 VGYDDIGGCRKQLAQIKEMVELPL 785
V Y DIGGC Q +I+E VELPL
Sbjct: 112 VTYTDIGGCDIQKQEIREAVELPL 135
>07_03_1770 -
29382508-29382591,29382901-29383041,29383134-29383520,
29383685-29383930,29385396-29385437,29385973-29386461
Length = 462
Score = 32.3 bits (70), Expect = 0.45
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 630 FCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
F +++ ++ + +P+ + E Y DIGG Q+ +IKE VELPL
Sbjct: 176 FQVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPL 227
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 32.3 bits (70), Expect = 0.45
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
YD IGG +Q+ +IKE++ELP++
Sbjct: 187 YDMIGGLDQQIKEIKEVIELPIK 209
>02_01_0789 -
5919271-5919411,5920105-5920215,5920303-5920401,
5920486-5920642,5920774-5920937,5921017-5921079,
5921153-5921377,5922038-5922135,5923283-5923499
Length = 424
Score = 32.3 bits (70), Expect = 0.45
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
YD IGG +Q+ +IKE++ELP++
Sbjct: 165 YDMIGGLDQQIKEIKEVIELPIK 187
>03_02_0691 +
10432615-10433109,10433155-10433216,10433526-10433565,
10434562-10434807,10435020-10435189,10435323-10435539,
10435615-10435755,10435943-10436026
Length = 484
Score = 31.9 bits (69), Expect = 0.60
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 654 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
++ + +P+ + E Y DIGG Q+ +IKE VELPL
Sbjct: 206 ILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPL 249
>07_03_1644 -
28338535-28339103,28339512-28340326,28341104-28341205,
28342469-28342594,28342782-28343071
Length = 633
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 614 FDHFELDGAHAPPDHEGVVTMDRTVSLXEVRLQVYFE 504
F+ L+ DHE V+ D+ VSL +V++ Y+E
Sbjct: 401 FEFIPLEDGLRLTDHEEVIENDKLVSLVDVKVGCYYE 437
>03_05_0754 + 27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 563 HLHGPGGHARRRVQSGRNRSITILHRG 643
HLHG G RR + +GR R+I +L G
Sbjct: 1263 HLHGHHGRLRRFLAAGRLRAIDVLGHG 1289
>06_03_0711 +
23798998-23799106,23799838-23799957,23800181-23800317,
23800418-23800579,23800707-23800793,23800872-23800958,
23801317-23801454,23802023-23802214,23802287-23802385,
23802490-23802564
Length = 401
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 672 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
+P+ E V Y +GG Q+ +++E +ELPL
Sbjct: 124 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPL 161
>02_01_0754 -
5595813-5595887,5595973-5596071,5596136-5596327,
5596992-5597129,5597415-5597501,5597583-5597669,
5597795-5597956,5598089-5598225,5598483-5598602,
5600668-5600773
Length = 400
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 672 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
+P+ E V Y +GG Q+ +++E +ELPL
Sbjct: 123 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPL 160
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPL 785
Y+DIGG KQ+ ++ E + LP+
Sbjct: 161 YNDIGGLEKQIQELVEAIVLPM 182
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPL 785
Y+DIGG KQ+ ++ E + LP+
Sbjct: 164 YNDIGGLEKQIQELVEAIVLPM 185
>08_02_0113 -
12715888-12716181,12717443-12717602,12718327-12718368,
12718443-12718465,12718616-12720653,12720736-12720965,
12722207-12722329,12722438-12723010,12724684-12724733,
12726828-12726923,12726987-12727394,12727609-12727795
Length = 1407
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 20 YGNVTLGLKFAE*LFGVIKIIIVLRF*Q*IVNKMADNKS 136
Y + G++ AE V+K+I +L F NK ADN+S
Sbjct: 580 YEELNFGVEAAENALSVVKLIAILIFTVHNANKDADNQS 618
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,165,263
Number of Sequences: 37544
Number of extensions: 441610
Number of successful extensions: 1275
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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