Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_D02
(789 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 354 2e-97
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 354 2e-97
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 354 2e-97
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 354 2e-97
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 351 1e-96
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 279 6e-75
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 131 3e-30
D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of s... 36 0.22
BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome, ma... 36 0.22
AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein. 36 0.22
AB075520-1|BAE45763.1| 433|Homo sapiens putative protein produc... 36 0.22
BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein. 35 0.29
AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens ... 35 0.29
AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associa... 35 0.29
AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associa... 35 0.29
L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulat... 33 0.89
CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein. 33 0.89
BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome, ma... 33 0.89
BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome, ma... 33 0.89
BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome, ma... 33 0.89
BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome, ma... 33 0.89
BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome, ma... 33 0.89
AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase s... 33 0.89
D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42 pr... 33 1.2
CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein. 33 1.2
BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome, ma... 33 1.2
BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome, ma... 33 1.2
AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulato... 33 1.2
L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interact... 32 2.7
D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p4... 32 2.7
BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome, ma... 32 2.7
BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome, ma... 32 2.7
AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens ... 32 2.7
AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase s... 32 2.7
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 354 bits (871), Expect = 2e-97
Identities = 161/207 (77%), Positives = 183/207 (88%)
Frame = +3
Query: 168 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 347
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 348 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 527
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 528 FXEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 707
F EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 708 NAVGYDDIGGCRKQLAQIKEMVELPLR 788
N VGYDDIGGCRKQLAQIKEMVELPLR
Sbjct: 199 NEVGYDDIGGCRKQLAQIKEMVELPLR 225
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 354 bits (871), Expect = 2e-97
Identities = 161/207 (77%), Positives = 183/207 (88%)
Frame = +3
Query: 168 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 347
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 348 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 527
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 528 FXEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 707
F EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 708 NAVGYDDIGGCRKQLAQIKEMVELPLR 788
N VGYDDIGGCRKQLAQIKEMVELPLR
Sbjct: 199 NEVGYDDIGGCRKQLAQIKEMVELPLR 225
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 354 bits (871), Expect = 2e-97
Identities = 161/207 (77%), Positives = 183/207 (88%)
Frame = +3
Query: 168 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 347
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 348 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 527
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 528 FXEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 707
F EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 708 NAVGYDDIGGCRKQLAQIKEMVELPLR 788
N VGYDDIGGCRKQLAQIKEMVELPLR
Sbjct: 199 NEVGYDDIGGCRKQLAQIKEMVELPLR 225
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 354 bits (871), Expect = 2e-97
Identities = 161/207 (77%), Positives = 183/207 (88%)
Frame = +3
Query: 168 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 347
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 348 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 527
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 528 FXEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 707
F EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 708 NAVGYDDIGGCRKQLAQIKEMVELPLR 788
N VGYDDIGGCRKQLAQIKEMVELPLR
Sbjct: 199 NEVGYDDIGGCRKQLAQIKEMVELPLR 225
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 351 bits (864), Expect = 1e-96
Identities = 160/207 (77%), Positives = 182/207 (87%)
Frame = +3
Query: 168 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 347
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 348 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 527
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 528 FXEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 707
F EAYRPI + D F+VRGGMRAVEFKVVET PSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETHPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 708 NAVGYDDIGGCRKQLAQIKEMVELPLR 788
N VGYDDIGGCRKQLAQIKEMVELPLR
Sbjct: 199 NEVGYDDIGGCRKQLAQIKEMVELPLR 225
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 279 bits (685), Expect = 6e-75
Identities = 126/161 (78%), Positives = 138/161 (85%)
Frame = +3
Query: 306 KETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVE 485
+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VE
Sbjct: 3 REAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVE 62
Query: 486 GLTGNLFEVYLKPYFXEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHC 665
G+TGNLFEVYLKPYF EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC
Sbjct: 63 GITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHC 122
Query: 666 DGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQIKEMVELPLR
Sbjct: 123 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLR 163
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 131 bits (316), Expect = 3e-30
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = +3
Query: 600 FKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEL 779
FKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQIKEMVEL
Sbjct: 1 FKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVEL 60
Query: 780 PLR 788
PLR
Sbjct: 61 PLR 63
>D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of sgv1
protein.
Length = 433
Score = 35.5 bits (78), Expect = 0.22
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +3
Query: 714 VGYDDIGGCRKQLAQIKEMVELPL 785
V Y D+GGC++Q+ +++E+VE PL
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPL 195
>BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 2 protein.
Length = 433
Score = 35.5 bits (78), Expect = 0.22
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +3
Query: 714 VGYDDIGGCRKQLAQIKEMVELPL 785
V Y D+GGC++Q+ +++E+VE PL
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPL 195
>AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein.
Length = 409
Score = 35.5 bits (78), Expect = 0.22
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +3
Query: 714 VGYDDIGGCRKQLAQIKEMVELPL 785
V Y D+GGC++Q+ +++E+VE PL
Sbjct: 148 VTYSDVGGCKEQIEKLREVVETPL 171
>AB075520-1|BAE45763.1| 433|Homo sapiens putative protein product
of Nbla10058 protein.
Length = 433
Score = 35.5 bits (78), Expect = 0.22
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +3
Query: 714 VGYDDIGGCRKQLAQIKEMVELPL 785
V Y D+GGC++Q+ +++E+VE PL
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPL 195
>BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein.
Length = 695
Score = 35.1 bits (77), Expect = 0.29
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 681 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
K +E++ V YD IGG QL I+E++ELPL+
Sbjct: 338 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLK 373
>AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ34065 fis, clone FCBBF3000536, highly similar to
Mus musculus spermatogenesis associated factor (SPAF)
mRNA. ).
Length = 893
Score = 35.1 bits (77), Expect = 0.29
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 681 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
K +E++ V YD IGG QL I+E++ELPL+
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLK 374
>AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associated
factor protein protein.
Length = 790
Score = 35.1 bits (77), Expect = 0.29
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 681 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
K +E++ V YD IGG QL I+E++ELPL+
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLK 374
>AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associated
factor protein.
Length = 893
Score = 35.1 bits (77), Expect = 0.29
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 681 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLR 788
K +E++ V YD IGG QL I+E++ELPL+
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLK 374
>L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulatory
subunit protein.
Length = 440
Score = 33.5 bits (73), Expect = 0.89
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 654 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
V+ D +P+ + E Y DIGG Q+ +IKE VELPL
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPL 205
>CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein.
Length = 440
Score = 33.5 bits (73), Expect = 0.89
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 654 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
V+ D +P+ + E Y DIGG Q+ +IKE VELPL
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPL 205
>BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 33.5 bits (73), Expect = 0.89
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 654 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
V+ D +P+ + E Y DIGG Q+ +IKE VELPL
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPL 205
>BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 33.5 bits (73), Expect = 0.89
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 654 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
V+ D +P+ + E Y DIGG Q+ +IKE VELPL
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPL 205
>BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 33.5 bits (73), Expect = 0.89
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 654 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
V+ D +P+ + E Y DIGG Q+ +IKE VELPL
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPL 205
>BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 33.5 bits (73), Expect = 0.89
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 654 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
V+ D +P+ + E Y DIGG Q+ +IKE VELPL
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPL 205
>BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 33.5 bits (73), Expect = 0.89
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 654 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
V+ D +P+ + E Y DIGG Q+ +IKE VELPL
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPL 205
>AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase
subunit 1 variant protein.
Length = 440
Score = 33.5 bits (73), Expect = 0.89
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 654 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
V+ D +P+ + E Y DIGG Q+ +IKE VELPL
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPL 205
>D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42
protein.
Length = 389
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 672 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
+P+ E V Y +IGG +Q+ +++E++ELPL
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPL 153
>CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein.
Length = 389
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 672 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
+P+ E V Y +IGG +Q+ +++E++ELPL
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPL 153
>BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 672 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
+P+ E V Y +IGG +Q+ +++E++ELPL
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPL 153
>BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 672 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
+P+ E V Y +IGG +Q+ +++E++ELPL
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPL 153
>AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulatory
subunit protein.
Length = 389
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 672 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
+P+ E V Y +IGG +Q+ +++E++ELPL
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPL 153
>L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interactor
protein.
Length = 406
Score = 31.9 bits (69), Expect = 2.7
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
Y+ IGG KQ+ +IKE++ELP++
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVK 170
>D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p45
protein.
Length = 406
Score = 31.9 bits (69), Expect = 2.7
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
Y+ IGG KQ+ +IKE++ELP++
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVK 170
>BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 31.9 bits (69), Expect = 2.7
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
Y+ IGG KQ+ +IKE++ELP++
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVK 170
>BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 31.9 bits (69), Expect = 2.7
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
Y+ IGG KQ+ +IKE++ELP++
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVK 170
>AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens
clone 23598 mRNA, complete cds. ).
Length = 280
Score = 31.9 bits (69), Expect = 2.7
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
Y+ IGG KQ+ +IKE++ELP++
Sbjct: 22 YEMIGGLDKQIKEIKEVIELPVK 44
>AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase
subunit 5 variant protein.
Length = 345
Score = 31.9 bits (69), Expect = 2.7
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
Y+ IGG KQ+ +IKE++ELP++
Sbjct: 144 YEMIGGLDKQIKEIKEVIELPVK 166
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,714,222
Number of Sequences: 237096
Number of extensions: 2346952
Number of successful extensions: 4800
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 4582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4797
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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