Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_D02
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 304 4e-83
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 301 4e-82
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 301 4e-82
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 35 0.076
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 35 0.076
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 35 0.076
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 33 0.23
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 32 0.54
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 32 0.54
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 31 0.71
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 31 0.94
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 30 2.2
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 29 3.8
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 29 3.8
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 29 5.0
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am... 28 6.6
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am... 28 6.6
AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical ... 28 8.8
AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 304 bits (747), Expect = 4e-83
Identities = 134/206 (65%), Positives = 172/206 (83%)
Frame = +3
Query: 171 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 350
K +PNRLIV+++ DDNSV+A+SQAKM++L LFRGD V+LKGK+RKE+V I++SD++CP+
Sbjct: 26 KVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKESVAIIVSDESCPN 85
Query: 351 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 530
EK+RM DVVSI P P++ YG R+H+LPIDD++EGLTGNLF+V+LKPYF
Sbjct: 86 EKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVLPIDDTIEGLTGNLFDVFLKPYF 145
Query: 531 XEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALN 710
EAYRP+H+ D F V+ MR VEFKVVET+P+P CIV+PDT+IH +G+PIKREEEEE++N
Sbjct: 146 LEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPACIVSPDTMIHYEGDPIKREEEEESMN 205
Query: 711 AVGYDDIGGCRKQLAQIKEMVELPLR 788
+GYDD+GG RKQLAQIKEMVELPLR
Sbjct: 206 DIGYDDLGGVRKQLAQIKEMVELPLR 231
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 301 bits (739), Expect = 4e-82
Identities = 139/206 (67%), Positives = 172/206 (83%)
Frame = +3
Query: 171 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 350
K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+ETV IVL+ DNCP+
Sbjct: 26 KKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNCPN 85
Query: 351 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 530
+KI+M DVVSI+ ++YGKRVH+LPIDD++EGLTGNLF+V+L+PYF
Sbjct: 86 DKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYF 144
Query: 531 XEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALN 710
+AYRP+H+ D F V+ MR VEFKVVETDP+P CIVAPDTVIH +G+PIKREEEEEALN
Sbjct: 145 TDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALN 204
Query: 711 AVGYDDIGGCRKQLAQIKEMVELPLR 788
VGYDD+GG RKQLAQIKEMVELPLR
Sbjct: 205 EVGYDDLGGVRKQLAQIKEMVELPLR 230
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 301 bits (739), Expect = 4e-82
Identities = 139/206 (67%), Positives = 172/206 (83%)
Frame = +3
Query: 171 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 350
K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+ETV IVL+ DNCP+
Sbjct: 26 KKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNCPN 85
Query: 351 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 530
+KI+M DVVSI+ ++YGKRVH+LPIDD++EGLTGNLF+V+L+PYF
Sbjct: 86 DKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYF 144
Query: 531 XEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALN 710
+AYRP+H+ D F V+ MR VEFKVVETDP+P CIVAPDTVIH +G+PIKREEEEEALN
Sbjct: 145 TDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALN 204
Query: 711 AVGYDDIGGCRKQLAQIKEMVELPLR 788
VGYDD+GG RKQLAQIKEMVELPLR
Sbjct: 205 EVGYDDLGGVRKQLAQIKEMVELPLR 230
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 37.5 bits (83), Expect = 0.011
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPL 785
+DDIGGC Q+ ++KE VELPL
Sbjct: 182 FDDIGGCESQIQELKESVELPL 203
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 34.7 bits (76), Expect = 0.076
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 714 VGYDDIGGCRKQLAQIKEMVELPL 785
V Y D+GGC+ Q+ +++E+VE PL
Sbjct: 174 VTYSDVGGCKDQIEKLREVVETPL 197
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 34.7 bits (76), Expect = 0.076
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 672 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
+P+ + E + Y D+GG +Q+ +++E+VELPL
Sbjct: 125 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPL 162
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 34.7 bits (76), Expect = 0.076
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 672 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
+P+ + E + Y D+GG +Q+ +++E+VELPL
Sbjct: 133 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPL 170
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 654 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 785
V+ D +P+ + E Y D+GG +Q+ +IKE VELPL
Sbjct: 165 VLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPL 208
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 31.9 bits (69), Expect = 0.54
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
+D+IGGC + +A++K+ + LPLR
Sbjct: 79 WDEIGGCEELVAELKDRIILPLR 101
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 31.9 bits (69), Expect = 0.54
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
+D+IGGC + +A++K+ + LPLR
Sbjct: 82 WDEIGGCEELVAELKDRIILPLR 104
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 31.5 bits (68), Expect = 0.71
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
Y+ +GG KQ+ +IKE++ELP++
Sbjct: 158 YEMVGGLDKQIKEIKEVIELPVK 180
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 31.1 bits (67), Expect = 0.94
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPL 785
Y DIGGC KQ+ ++ E V LP+
Sbjct: 176 YSDIGGCDKQIQELIEAVVLPM 197
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 714 VGYDDIGGCRKQLAQIKEMVELPL 785
+ Y DIGG Q +++E VELPL
Sbjct: 158 ISYGDIGGLDMQKQEVREAVELPL 181
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
Y+ +GG Q+ +IKE++ELP++
Sbjct: 153 YEMVGGLDTQIKEIKEVIELPVK 175
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 720 YDDIGGCRKQLAQIKEMVELPLR 788
Y+ +GG Q+ +IKE++ELP++
Sbjct: 174 YEMVGGLDTQIKEIKEVIELPVK 196
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 615 TDPSPFCIVAPDTVIHCDGEPIKREEEEE--ALNAVGYD 725
++P+P VAP+ + E + E+EE A+ +GYD
Sbjct: 153 SNPAPAADVAPEAAAPAEAEALTDEQEENVLAITGMGYD 191
>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform a protein.
Length = 1212
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 611 DHFELDGAHAPPDHEGVVTMDR-TVSLXEVRLQVYFE 504
D+ + D PPD GVVT ++ S+ +R +V FE
Sbjct: 222 DYSKKDSTFKPPDFTGVVTCEKPDKSIYTIRAKVEFE 258
>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform b protein.
Length = 1454
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 611 DHFELDGAHAPPDHEGVVTMDR-TVSLXEVRLQVYFE 504
D+ + D PPD GVVT ++ S+ +R +V FE
Sbjct: 222 DYSKKDSTFKPPDFTGVVTCEKPDKSIYTIRAKVEFE 258
>AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical
protein Y39F10A.3 protein.
Length = 309
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 145 IIRTFIICHFIHNLLLESKNYYNFY 71
++ F++C + N+LL SK+ Y FY
Sbjct: 8 LLLAFVVCLTLFNVLLWSKSNYGFY 32
>AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical
protein Y97E10AL.2 protein.
Length = 345
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = -2
Query: 731 DVIIADSI*CFLFFLTFNRFTVTVYYGIRSH----DAKW*WICFDHFELDGAHAPPDHEG 564
D ++ DS +F+ N F T Y+ + + D + +CFD+ + P +G
Sbjct: 105 DDMMRDSENQIIFYAHGNSFDRTFYHRVEMYNLLSDCNYHVVCFDYRGYGDSEGTPTEKG 164
Query: 563 VVTMDRTV 540
+V +TV
Sbjct: 165 IVEDTKTV 172
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,833,774
Number of Sequences: 27780
Number of extensions: 376054
Number of successful extensions: 1076
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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