Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_D01
         (426 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide...    24   2.6  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    22   7.9  

>DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide F
           prepropeptide protein.
          Length = 234

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 128 PGWGLYHIHNLTLGNHYRRSLTDRWSRALYQR 223
           P W +Y+ H LT G   + +      RA  QR
Sbjct: 170 PSWAMYNEHQLTTGQQAQPANEASEKRAPTQR 201


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein
          protein.
          Length = 1133

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 27 SERKHLCNLGYE 62
          SERK +C  GYE
Sbjct: 30 SERKDVCKTGYE 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 339,235
Number of Sequences: 2352
Number of extensions: 5759
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)